KEGG   Oncorhynchus mykiss (rainbow trout): 110502567
Entry
110502567         CDS       T07259                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a isoform X2
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03010  Ribosome
omy04120  Ubiquitin mediated proteolysis
omy04137  Mitophagy - animal
omy04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    110502567
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110502567
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    110502567
   04137 Mitophagy - animal
    110502567
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:omy03011]
    110502567
   04121 Ubiquitin system [BR:omy04121]
    110502567
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omy04147]
    110502567
Ribosome [BR:omy03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    110502567
  Archaea
    110502567
Ubiquitin system [BR:omy04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   110502567
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110502567
  Exosomal proteins of colorectal cancer cells
   110502567
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 Dsc3_N IBR Ubiquitin_5 TBK1_ULD OTU1_UBXL
Other DBs
NCBI-GeneID: 110502567
NCBI-ProteinID: XP_021436374
Ensembl: ENSOMYG00000046297
UniProt: A0A060WZ23
LinkDB
Position
23:complement(30826587..30834728)
AA seq 156 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPAEECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagattttcgtcaaaaccctcacggggaagactataaccctcgaggttgagccttca
gacaccattgaaaatgtcaaggccaaaatccaagacaaagaaggtatccctcccgatcag
cagaggttgatctttgctggtaagcagctggaggatggacgcacactgtccgactacaac
attcagaaggagtccactctgcatttggtgctgagactccgtgggggtgccaaaaagagg
aagaagaagtcctacaccactcccaaaaagaacaagcacaagaggaagaaggtcaagctc
gcagtgctcaagtactacaaggttgatgaaaatggcaagatccaccgtctgcgtcgtgag
tgtccagctgaagagtgtggtgctggtgtgttcatggccagccacttcgataggcactat
tgtggcaagtgctgcctcacttactgcttcaacaagccagaggacaagtaa

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