Oncorhynchus mykiss (rainbow trout): 110502675
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Entry
110502675 CDS
T07259
Symbol
hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110502675 (hps1)
Membrane trafficking [BR:
omy04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
110502675 (hps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_2
Fuz_longin_3
PKcGMP_CC
Motif
Other DBs
NCBI-GeneID:
110502675
NCBI-ProteinID:
XP_036816278
Ensembl:
ENSOMYG00000022522
UniProt:
A0A8C7RF12
LinkDB
All DBs
Position
23:37007525..37029828
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AA seq
719 aa
AA seq
DB search
MKCLLIASESAEVLFYWTDPEFELNIQEQYGASQEEGEKPPAFEDSINTLFAPIIISCST
MVDRLGDSYTSFSTENNHTYVLHQFEECLYIAVNGDREEGEEDLKRKIYVMKKMIEVLFG
MVTLSSTLIRKELRPQDTEQRTNLWKYLQNLLETYSRLQEQDQSFLVEAVERLIHPTLCE
QCIEFLERRLVQQINSSVERAGEEVLHAFILVHTKLLAFYSSRNASTLTSSDLLALIVMV
QNMYPSNIDLEDTAPEDVENTSAPDIFYTPEPSPTNRDSGTDRDSVNSGRHEESRHEESR
HEESRHEESCYEESYHEESCHEESCHVGSGTPVFQFLDPDIQMAEDSLQTLEAPPPDPSN
PSRVFLEVTLKEGCYPMMPHSMYCLPLWPGITLVLLTKIPNSNLAMSVYVFLEAFAKLEK
RLSEGLEGSAARGQTSIQDLRNKLDKFIRALGTSDIQTSQLQSVWTEFKSRAFTRGGPGF
SKDLVPWCRTMKSQLCGVYRQCFITENTVGGGNPQRLSPSLQDRALTMVQEKLMDWKDFL
LVKSKRNITMVSYLEEFPGLIHFIYVDRTAGQMIAPSLNITDRATSELGKGPLAHFIKGK
VWGLVNTSRIYLQKGYSTVTLRDGDYFFCYFLWFENETGYKLEVKDLPILPNDSAPIGML
AWDYYRKLLRYYSKSHQGEVVKCYELLTVHLGVIPTEYILQHCSQLARKLWEPSRIPLL
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtctgctgatagccagcgagagcgctgaggtcctcttctattggacagaccca
gagtttgaactcaacatccaggagcagtatggcgcgtcacaggaagagggggagaagcca
ccagcatttgaggacagcatcaacactctgtttgcccccatcatcatctcctgcagtacc
atggtggacagactgggagacagctatacatcctttagtactgagaacaaccacacctat
gtgctacatcagtttgaggagtgtctgtacatcgctgtgaacggagacagagaagagggc
gaggaggatctgaagaggaagatttacgtgatgaagaagatgattgaggtcctcttcggc
atggttaccctcagcagcaccctaatcaggaaagagctgcgtcctcaggacacagagcag
aggaccaatctatggaaatatctacagaacctcctggagacctacagccgcctccaagag
caggaccagagctttttagtagaggcagtagagaggttgatccatcctactctatgtgaa
cagtgtatagagtttctggagcgtcgcttggtgcagcagatcaacagtagtgtggagaga
gcaggagaggaggtcctccatgcattcatactggtgcacaccaaactactagccttctat
tccagtcgtaacgctagtaccctcacctcgtctgacctgctggctcttatcgtcatggtg
cagaacatgtatcctagcaacatcgacctggaggatactgcccccgaggatgtggagaac
acctcagccccagatatattctacactccagagccttcccctactaatagggactctggg
actgacagggactctgttaattcaggcaggcatgaggagagcaggcatgaggagagcagg
catgaggagagcaggcatgaagagagctgttatgaagagagctatcatgaagagagctgt
catgaagagagctgtcatgtggggagcggtactcctgtgttccagtttttggatccagac
attcagatggcagaggacagtctccagaccctggaagctcctccccctgacccctcaaac
cctagcagagtcttcctagaggtcacgctgaaggagggctgctatcccatgatgcctcac
tccatgtactgtctgccactctggccgggcatcactctggtgctgctcactaagatacct
aacagtaacctggccatgtcagtctatgtgttcctggaggcatttgctaagttggagaag
cgtctgagtgaaggtctggaggggtcagcggcccgcggccagacgtccatacaggacctc
cgcaacaaactggacaagttcattagggcattgggaacctcagacatacagacgtcccag
ctacagagtgtgtggacagagtttaagagccgcgcattcaccagaggaggacctggcttc
agcaaggacctggttccctggtgtcgtactatgaagagtcagctgtgtggagtctacaga
caatgtttcatcacagagaacacagttggaggagggaatccacagcgtctatcacccagt
ctacaggacagagctctcaccatggtgcaggagaaattgatggattggaaagacttcctg
ttggtgaagagtaagagaaacatcaccatggtgtcgtaccttgaggagttcccgggcctg
atccatttcatctacgtcgaccgcaccgctggtcagatgatcgcgccatctctcaacatc
acggaccgcgcaacctctgagctaggaaaggggccactggctcacttcataaagggcaag
gtatggggcctggttaatacatcgaggatttacctacagaagggttattccactgtcact
ctgagagatggagactacttcttctgctacttcctctggttcgaaaacgaaacgggctac
aagctggaagtaaaggacctgccaatactgccaaatgactccgcccccatcggaatgctg
gcctgggactactacaggaagctgttgcgctactacagtaagagccaccagggggaggtg
gtgaagtgttatgagctgctgacagtccatctaggagtcatcccaacagagtacatacta
caacactgtagtcaattagcacgcaaactctgggagccctcacgtatacccctactgtag
DBGET
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