Oncorhynchus mykiss (rainbow trout): 110502722
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Entry
110502722 CDS
T07259
Name
(RefSeq) nucleolar RNA helicase 2 isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omy03009
]
110502722
03036 Chromosome and associated proteins [BR:
omy03036
]
110502722
Enzymes [BR:
omy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110502722
Ribosome biogenesis [BR:
omy03009
]
Eukaryotic type
Pre-60S particles
Helicases
110502722
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
110502722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Gly_acyl_tr_C
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110502722
NCBI-ProteinID:
XP_021436649
Ensembl:
ENSOMYG00000041032
UniProt:
A0A8C7U6F6
LinkDB
All DBs
Position
23:39493501..39514121
Genome browser
AA seq
749 aa
AA seq
DB search
MPSNIIFETEDIGMEGELDISAGSTKPKKVKDKKTKEGKKIKKHKTVVEEEPDCEPVPKK
KKKKKEKVDKANGDVNKSIDVNGNIESHLKNNTSYSNEESADNNKATEKKKTSEEVVVNR
VLPKTPTLIAQTNGHSTTTTPAQSSEDSGSDGEKEIETPEQKEGAFSNFRISPNTIKLLQ
ARGISFLFDIQTQTFNSVYEGKDVIGQARTGTGKTLAFAIPLIEKIQNDPDDKRWGRAPK
VLCLAPTRELAIQVAKDFKDMTKKLSVTCFYGGSSYNPQLDAIRSGIDVLVGTPGRIKDH
LQNNKLDLSQLKHVVLDEVDQMLDMGFAEQVEEILSASYQKDSESNPQTLLFSATCPPWV
YVVAKKYMRPTYEHVDLIGKKTQKAATTVEHLAIACHWSQRAAVIGDVVQVYSGSHGRTI
VFCETKKDANELSMNTSIKQSSQSLHGDIPQKQREITLKGFRSGTFEVLVATNVAARGLD
IPEVDLVVQCSPPKDVESYIHRSGRTGRAGRAGVCICFYQRKEEDQLRYVEQKAGITFKR
VGVPTPSDIIKSSSKDAVRFLDSVPPQAIEYFRVAATKLIEERGAVDSLAAALAHISGAT
ALEQRSLLNSDAGYTTMTMNCSQELHNIGCAWRGLKEQLGEEIDDVIRGMTFLKGKMGVC
FDVPAHKVKEYQDAWQDGRRWQLSIATELPELEEKQRMGGDRGYGRSFSGRGGGGRGGGH
GFRNGGGGGGNWRGGGGSHKRSFSSAFDY
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgccatcaaatattatttttgaaacagaagacatcgggatggaaggagaactggacatt
agtgcgggcagtacgaaacccaaaaaagtaaaggataagaagaccaaggaggggaagaaa
atcaagaaacataaaacagttgttgaagaggaacctgactgtgaacctgttccgaagaag
aagaagaagaagaaagaaaaggtggacaaagcaaatggggatgtgaacaaatccattgat
gtgaatggtaatattgaatcacatttgaagaacaacacatcttattccaatgaggagtct
gcagacaataacaaagcaactgagaaaaagaagacgtcagaagaagtagttgtcaacaga
gtgttgcctaagactcccacgctgatcgcacaaactaatggacattccacgacgacaact
ccagcacaatcaagcgaagactctggcagtgacggtgaaaaagaaattgaaacaccagaa
caaaaagaaggagccttttcaaacttcagaatctcccccaacaccatcaaactacttcaa
gcacgaggcatatctttcctctttgacatccaaacccaaaccttcaattcagtgtatgag
ggaaaggatgtaattggtcaggcaagaacaggcactggcaaaacattagcttttgctatt
ccgctgatcgagaaaatccaaaatgacccggatgacaagaggtggggcagagccccaaag
gttctgtgccttgctccaacgagagaattggctattcaagtagccaaggatttcaaggac
atgacaaagaaactgtctgttacctgtttctatggtgggagttcctacaaccctcaactt
gatgcaatccgcagtggcatcgatgtcctagtgggaactccaggtcgtatcaaggaccat
ctacagaataacaaactggacttgtcacaattgaagcacgttgtattagatgaagtggac
caaatgcttgatatgggctttgcagaacaggtggaggagatactttctgcatcttaccaa
aaagactctgagagcaatccccagaccctgctcttctctgccacatgcccaccatgggtg
tatgttgtggcaaagaagtacatgaggccaacttatgagcatgtggacctcattggcaaa
aagacccagaaagctgccaccacagtagagcaccttgccattgcgtgtcactggtctcag
agggctgcagtcattggggatgtggtccaggtgtacagtggcagccacggccgcaccatc
gtcttctgtgagaccaagaaggatgccaacgagctgtcaatgaacacctccataaaacag
agttcccagtcacttcatggggacattcctcagaagcagagggagatcacattgaaaggc
ttcagaagtggcacctttgaggtcttggtggccaccaacgttgctgctcgtgggttggac
atcccagaggtagacctggtcgtgcagtgctcacccccaaaggatgtggagtcatatatt
caccggtcaggtcgcactggtagggctggcagggcaggcgtctgcatctgtttctaccaa
cgcaaagaggaagaccagctccgatacgtagagcagaaagcaggcatcacatttaagaga
gttggagtgcccactcccagtgacatcatcaaatcctccagtaaagacgcagtgaggttt
ttagactctgtgcctccccaagccattgagtacttccgtgtggctgctaccaagctgatt
gaggagcgtggggccgtggattccctggctgccgccctggcacatatatcaggtgccact
gccctggagcagaggtccctcctcaactctgacgctggctacaccacaatgacaatgaac
tgctcccaggagctgcacaacattggctgcgcttggcgtggtctaaaggagcagctggga
gaggagattgacgatgtgatccgggggatgaccttcctcaagggaaaaatgggagtctgt
tttgatgttccagctcacaaagtaaaggagtaccaagatgcatggcaggatggtaggcgt
tggcagctgtcaatcgccacagagctccctgagctggaggagaaacagcgcatgggtggt
gaccgtggatacggacgctcgttcagtggacgtggtggtggaggacgagggggtggccat
ggcttcagaaacggcggcggtggtggtggcaactggagaggaggtggaggcagtcataaa
cgcagcttcagcagtgcatttgattattaa
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