Oncorhynchus mykiss (rainbow trout): 110502801
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Entry
110502801 CDS
T07259
Name
(RefSeq) tripartite motif-containing protein 16 isoform X1
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110502801
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110502801
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110502801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-C3HC4
zf-RING_UBOX
DUF4407
zf-RING_10
Prok-RING_4
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
110502801
NCBI-ProteinID:
XP_021436769
Ensembl:
ENSOMYG00000047532
LinkDB
All DBs
Position
23:complement(43277974..43303118)
Genome browser
AA seq
717 aa
AA seq
DB search
MQNGTGAAEEVSLRESKRAEETTVERDMADTENESKSKPDQKLCCTVCSSALNKDKLATC
GHSVCASCLGKKGKGCPECLQSSGKPETAPVEQNGTLNGMVAESPPVIKPKEKYEKDIEA
QDSKTAEETMIKEDLKEPEDPKKTEEEKRKEKESDPPQPAEEVNEDGVNKKSKEGKAKEE
NAKEEDKANEEEVKEEVKVESLGLDDVVCDSCMETSPCMALKSCHTCLVSYCEAHLRPHL
ENPKFQNHRLVEPLRDIERRTCEIHKWSLELFCCSDAVCVCQDCVTEDHRGHNTVPVLEA
RRTIERELRDKQTEMVKTVAAAENAINQLQLNTVSFENSVMVVREVIDSQFMELQAAVER
AKREVTEILEGEDKQALRQTEGIKVHLEQKCTELKKTQEQLKKLSKNKNDVDFLQEYSKW
KKDSPDITLPGFYIGLIDRLNSFSRIIVTSTQELCEKLLSNYIETLKETCKNDKMGIKTT
VHETIAAKQNMTLPDPKTRDDFLKYAAPVSFDADTAHKFLRLTEKNRKVTNTTPWQHPYP
DVPERFENWRQVLATESFYVGRHYFEVDVSGEGTYVGLTYKSIDRKSPKNNSCITGNDFS
WCLQWNGRSFSAWHSDVETPLKVGKFTRIGVYVEFSCGLLAFYGVDNAVGMTLIHKYKAD
FLEPLYPAFWLSKKENVIELVGPGESLTLKSPSPPNSPPNTDVAPPSRFTVSSVVDQ
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacggaacaggagcggctgaggaagttagtctcagagagagtaagagagcagag
gaaactactgtagagagagacatggcagacacagaaaacgagtcaaaatccaaaccagac
cagaaactctgctgcactgtgtgttccagtgctctcaataaggataagctcgctacctgt
ggccactcagtctgtgcctcctgcttggggaagaaaggtaaaggctgtcctgagtgtcta
cagagctctggcaagcctgaaactgcacctgtggaacagaatggaacgttgaatggaatg
gtggctgagtctccaccggtgatcaaacccaaagaaaaatatgaaaaggacatagaagcc
caggattcaaagaccgcagaggaaacaatgataaaggaagacctgaaggaaccagaggac
cctaaaaaaacagaggaagagaaaaggaaagagaaagagagtgaccctccacagcctgca
gaggaagtgaatgaggatggggtgaacaagaaatcaaaggaagggaaagcaaaagaagag
aacgcaaaggaagaagacaaggcaaacgaagaagaggtcaaggaagaggtgaaagtagag
tcgttgggactcgatgatgttgtgtgtgactcatgtatggagacgagcccgtgcatggcc
ctaaagtcgtgccacacctgccttgtgtcctactgcgaggcccacctcaggccccatttg
gagaaccccaagttccagaaccaccgtctggtggagccgctgagggacatcgagagacgg
acctgtgagattcacaaatggtccctggagctgttctgctgttctgatgctgtgtgtgtc
tgtcaggactgtgtgacagaagaccataggggacataacactgttcctgtgttagaggcg
cgcagaaccatagagagggaattacgagataaacaaacagagatggtgaagacagtggcg
gcagcagagaatgccatcaaccaactccaactcaacacggtttcctttgagaattcagtg
atggtggtccgtgaggtgattgacagccagtttatggagctgcaggctgcggtggagcgg
gccaagagagaggtgacagagatcctggagggagaggacaagcaggctctcagacagacc
gaggggatcaaggtacacctggagcagaagtgcactgagctgaagaagacacaagagcag
ttgaaaaagctctcgaagaacaagaacgacgtggacttcctacaagagtactctaaatgg
aagaaggacagccctgacattaccctacctgggttctacatcggcctcatagaccggctc
aactccttcagcagaataattgttacctccacacaggagctgtgtgagaagctgctgtcc
aattacatagagacactcaaagagacctgcaaaaatgacaagatggggataaaaaccaca
gtccatgaaacaatcgcagccaaacagaacatgactttgccagacccaaagacgcgggat
gacttcctaaagtatgccgcgcctgtgagttttgacgcagacacggcccataagttcctg
cgtctgactgagaaaaacaggaaggtgaccaacaccacaccctggcaacacccgtacccc
gatgtccctgagcgctttgagaactggcgccaggtactggccacagagagcttctatgtt
ggtcgacactacttcgaggtggacgtgagcggtgagggcacgtatgtcggactcacctac
aagagcatcgatcgcaagagcccaaagaacaacagctgcattaccggcaatgacttctca
tggtgtctacaatggaacggccgcagcttctctgcctggcacagtgatgtggagacgcct
ctgaaagtggggaagttcacacgtattggggtctatgtggaattcagctgtggcctactg
gccttctatggggtggataatgctgtcggcatgaccctcattcacaaatacaaggctgac
tttctggagcctctttacccagccttctggctgtcgaagaaggagaacgtgatagagctt
gttggacctggggagtcgctgacactgaaaagcccctctcctcctaactcacccccaaac
actgatgttgcaccccccagccgtttcacagtatcttctgttgttgatcaatga
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