Oncorhynchus mykiss (rainbow trout): 110502823
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Entry
110502823 CDS
T07259
Symbol
snx5
Name
(RefSeq) sorting nexin-5 isoform X1
KO
K17920
sorting nexin-5/6/32
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110502823 (snx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110502823 (snx5)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omy04990
]
110502823 (snx5)
Membrane trafficking [BR:
omy04131
]
Endocytosis
Macropinocytosis
Sorting nexins
110502823 (snx5)
Domain-containing proteins not elsewhere classified [BR:
omy04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
110502823 (snx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
FAN1_HTH
Motif
Other DBs
NCBI-GeneID:
110502823
NCBI-ProteinID:
XP_021436820
Ensembl:
ENSOMYG00000040988
UniProt:
A0A8C7U4C0
LinkDB
All DBs
Position
23:complement(44758535..44773318)
Genome browser
AA seq
434 aa
AA seq
DB search
MRQEEQNGGCFQKIANIARLAAQHDDLQRCCTFIIMTSTLDDSEKEKARSVSVDLNNDAS
LLIDIPDALCERDKVKFTVHTKTTLSSFQKPDFSVPRQHEDFIWLHDALVETEDYAGLII
PPAPPKPDFESPREKMHKLGEGEATMTKEEYTKMKQELEAEYLAVFKKTVQVHEVFLQRL
SSHPILSKDRNFQIFLEYDQDLSVRRKNAKETFGSFFKNMVKSADEVIISGIKEVDDFFE
QEKTFLLDYSSKIKDSTARAEKMTRSHKNVADDYIHISATLNSLSVDDNTALKKHLEKFA
DLFEKLRKVEGRVASDEELKLTELFRYYMLDIQAAKDLLYRRARALADYENSNKALDKAR
LKSKDITQAEEHQQQCLQKFDKLSESGKRELTSFKGRRVVAFRKNLIEMSELEIKHAKNN
MALLQGCIELLKSN
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgagacaggaagagcaaaacgggggttgtttccagaagatagcgaatatagctagactt
gcagcacagcacgacgatctgcagcgttgttgtacttttataatcatgacatctactctt
gatgatagcgaaaaagaaaaggcacgctctgtgtctgtggaccttaacaacgacgcttct
ctactcatcgacattcctgatgcactctgtgaacgtgacaaagtcaagttcactgtccac
accaagaccaccctgagctccttccagaagccagacttctctgttcctaggcaacatgag
gactttatatggctccatgacgcgctggttgagactgaggactacgctgggctcattatc
cctccagcccccccgaagccagacttcgagagcccaagggagaagatgcataaactggga
gagggagaagccaccatgaccaaggaggaatacaccaagatgaagcaggagttagaggct
gagtacctggctgtatttaagaagactgtacaagtccacgaggtattcctgcagcgacta
tcttctcacccgatcctgagcaaggacagaaacttccagatattcctggagtatgaccag
gatctgagcgtacgaaggaagaacgccaaggagacgtttgggagtttctttaagaacatg
gtcaagagtgctgacgaggtcatcatctctgggataaaggaagtcgatgatttctttgag
caggagaagaccttcctgcttgattattcgtccaagatcaaagactccactgccagggca
gagaagatgacccgctctcacaaaaatgttgctgatgactacatccacatctctgccact
ttgaacagtctctctgtcgatgacaacaccgcacttaaaaagcaccttgagaagtttgca
gacctgtttgagaaactaaggaaagtggagggcagagtggcgtcagatgaggagctgaag
ctcacggagctgttccgttactacatgctggacatccaggcagccaaggacctgttgtac
aggcgggcccgggccctggctgactatgagaacagtaacaaggccctggacaaggcccgg
ctgaagagtaaagacatcacccaggctgaggagcaccaacaacagtgtctgcagaagttt
gacaagctctctgagtctggaaaaagagagctgaccagttttaagggcaggagagtggtg
gctttccgtaagaacctaatagagatgtctgaactggagatcaaacacgccaagaacaac
atggctctgctgcagggctgcattgagcttctcaagagcaactga
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