Oncorhynchus mykiss (rainbow trout): 110502866
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Entry
110502866 CDS
T07259
Name
(RefSeq) ran GTPase-activating protein 1 isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110502866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110502866
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110502866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
110502866
NCBI-ProteinID:
XP_021436881
Ensembl:
ENSOMYG00000044802
UniProt:
A0A8C7UQ89
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All DBs
Position
23:complement(47002000..47008330)
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AA seq
564 aa
AA seq
DB search
MASDDIALLAEALSKTHVGYGELSYKGQGLKLDNTESVKELVREIEEYQGLRALRLEGNT
VGVEAAQAIAKALECKDQLQSCHWSDMFTGRLRSEIPTALRSLGSALMTAGARLRELDLS
DNAFGPDGVKGIETLLKSSVCHSLQELRLNNCGMGIGGGKILAAALTECHEQSSVLGAPL
KLKVFQAGRNRLENEGATALALAFQLMGSLEEVHMPQNGINHAGVTALATAMQHNPHLRI
LNLNDNTFTKRGALAMAQALRHLRTVQVINFGDCLVRSEGAIALSAVLREGLPTLKELNL
SFGEITEAAALVLAQAVQDKPHMEKLDLNGNCLGEEGCEALKETMDNMDRADILASLSDD
EGEPDEEEEEEEEVEDEDNGKEMKENGVKDEKESPVKLEPTCHPEILSFLSSPTAETLLK
LGDNRTGLIQQHVDVSDPDKVADAFLRISSLYSDDHEVKKAVLETIDILLKKAFSGSSLQ
TYSFLSTLLVMLGLLKGEGKAKKVQVLPGHLLVLEHAVQQDYFPQDHATLLDTFVARHGK
ALKSCSHARDSLKSTLERRISPEC
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgatgacattgccctgctggccgaggcgctgtccaagactcatgtaggatat
ggagagttgagctacaagggccagggactgaagctggacaacacagagtctgtgaaggag
ttggtgcgggaaatagaggagtaccagggactccgggccctgcggttggagggaaacaca
gtgggagtggaggcagcgcaggctatcgccaaagccttggagtgcaaagaccaacttcag
agttgccactggagtgatatgttcacgggtcgcttgcgctcagaaatcccaactgccctg
aggtccctgggcagtgcgttgatgacagcaggggccagactgcgagagcttgacctgagt
gataacgcctttgggccagatggggtaaagggcattgagactctactgaagagctctgtg
tgtcactctctacaggagctgagactcaacaactgtggcatgggcatcggagggggcaag
atcctggcggcagcgttgactgagtgtcatgaacagtccagtgttctcggtgccccactg
aaactgaaagtgttccaagcaggcagaaaccgcttggagaacgaaggagccacagccctt
gccctggcatttcagctgatgggaagcctagaggaggtgcacatgccccagaatgggatc
aaccatgctggggtgactgctctggccaccgccatgcagcacaacccccacctgcgcatc
ctcaacctcaacgacaacaccttcaccaagagaggggcgctggctatggctcaggctctg
aggcacctaaggactgtgcaggtgatcaactttggggactgcctggtgcgttctgaaggg
gccatcgctctctctgctgtcctgagagagggactgcccactcttaaggagctaaatctg
tcctttggggagatcacggaagctgcagcactggtgttggctcaggccgtacaagacaaa
ccccatatggaaaaactggatctcaatggtaactgtttgggggaggaggggtgtgaggct
ctgaaggagaccatggacaacatggacagggctgacatactggcatctctcagtgatgat
gagggagagcctgatgaagaagaggaggaagaggaggaggttgaagatgaggataatggc
aaagagatgaaggagaatggagtgaaggatgaaaaagagagcccagtgaagcttgagcca
acttgtcatccagagatcctctctttcctcagctcccccactgctgagacactgctcaaa
ctgggggacaacaggactggactcatccagcaacacgtggatgtctctgaccctgataag
gttgccgatgccttcctgagaatctcctctctgtacagtgatgaccatgaggtcaagaag
gctgtcctggagactattgacatcctgttgaagaaggcattctctggttcctccctgcag
acctacagcttcctgtccactctactggtgatgctggggctcctcaagggtgagggcaag
gcgaagaaggtgcaggtgttacctggtcacctgttggttttggagcacgctgtccaacag
gactacttcccccaggaccacgccaccctgctggacacctttgtcgccaggcacggtaaa
gccctgaagtcctgcagccatgcccgagatagtctcaagtccacactggagagaaggatc
tccccggaatgctga
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