Oncorhynchus mykiss (rainbow trout): 110502883
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Entry
110502883 CDS
T07259
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110502883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110502883
03012 Translation factors [BR:
omy03012
]
110502883
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110502883
Translation factors [BR:
omy03012
]
Eukaryotic type
Release factors
110502883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
Motif
Other DBs
NCBI-GeneID:
110502883
NCBI-ProteinID:
XP_021436904
Ensembl:
ENSOMYG00000045903
LinkDB
All DBs
Position
23:47471182..47501401
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AA seq
586 aa
AA seq
DB search
MDPRDTAPDSWEQEEDAEARDAAGLQSALAALNVNAKPFVPNVNAAVFVPTFFQSSLTEI
PISDGHGAETVASMELSETVAPVENGGGTEADMMVEVETWEQKEEPGEGEPGGGGALGGE
GGSSEVVQGKEEEEMMEEEEEEELPMLKVIPLPPDAPKKEHVNVVFIGHVDAGKSTIGGQ
IMYLTGMVEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKH
FTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVK
HLIVLVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIYFMPCSGLTGANLKEPI
EECTWYTGLPFIPHLDSLPSFNRITDGPVRLPIVDKYKDMGTVILGKLESGFIAKAQQLV
MMPNRHTVEVLSLLSDEVETDEAVPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTF
DAQIVIIEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVC
IARLRCAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggacccgcgagacacagccccggattcgtgggagcaggaggaggatgccgaggcccga
gacgccgcgggactccagtccgctctcgccgctctcaacgtcaatgccaagccgtttgtc
ccgaatgtcaacgcggcggtgtttgtaccgaccttctttcaaagcagcctcacggaaatc
ccaatatccgacggtcacggtgctgagacagttgccagcatggagctgtcagaaacagtt
gctccagtggagaacggaggagggacagaagcagacatgatggtggaggtggagacgtgg
gagcagaaagaggagcccggggaaggagaaccaggaggagggggagccctgggaggagag
gggggttccagtgaggtggtgcagggaaaggaggaggaggagatgatggaagaggaagag
gaggaggagctgcccatgctcaaagtaatccccctcccaccagacgccccgaagaaggag
catgtcaatgtggtgttcatcgggcatgtggatgctggtaaatcaactattggaggtcag
atcatgtatttgacaggaatggtggagaaaagaaccctggagaaatatgaaagagaagcc
aaagaaaagaacagagaaacatggtacctgtcctgggctctggacaccaaccaggaggag
agagacaaggggaagacggtggaggtggggagagcctactttgagacagagaaaaagcac
tttactatcctggacgccccaggccacaaaagctttgtccccaacatgatcggtggggcg
tcacaggctgacctggcagtgctggtgatctcggccagaaaaggagagtttgagacaggc
tttgagaagggaggtcagacgcgggagcacgccatgctggccaagacggctggagtcaaa
cacctcatcgtcctcgtcaacaagatggacgaccccactgtcaactggagcttggaaagg
tatgaggaatgtaaagagaagttggtgccatttctgaagaaggtgggcttcaacccaaag
aaggacatctacttcatgccttgctctgggctgacgggagccaacctaaaggagcccata
gaggagtgcacatggtacacggggttgccattcatcccacatctggacagcctgccaagc
ttcaacagaatcacagatggccctgtcagattacccatcgtagacaaatacaaggatatg
ggcactgtgatcctggggaagctggaatctgggttcattgccaaagcccagcagctggtc
atgatgcctaacaggcacacagtggaggtgctgagcctgctgtctgacgaggtggagaca
gatgaagctgttcctggagagaacctgaagctaaggctgaagggcatcgaggaggaggag
atcctgcctggcttcatcctctgtaatgctgagaacctctgccactccggacgcactttt
gacgctcagattgtcatcattgagcataaatccatcatctgcccaggttacaacgcagtc
ctacacatccacacctgtattgaagaagtacaaatcacagccttaatctgtctagtggac
aagaagaccggtgagaagagcaagacgcgacctcgctttgtcaaacaggaccaggtgtgc
atcgcccggctacgttgtgctggaaccatctgcctcgagaccttcaaagacttcccacag
atggggaggttcaccctacgagatgaaggcaaaaccattgctattggcaaagtgctgaag
ctggtaccagagaaggactaa
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