Oncorhynchus mykiss (rainbow trout): 110502920
Help
Entry
110502920 CDS
T07259
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110502920
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110502920
Enzymes [BR:
omy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110502920
Peptidases and inhibitors [BR:
omy01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110502920
Ubiquitin system [BR:
omy04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110502920
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
110502920
NCBI-ProteinID:
XP_021436944
UniProt:
A0A8C7RE39
LinkDB
All DBs
Position
23:49402598..49427287
Genome browser
AA seq
1308 aa
AA seq
DB search
MTIVDRSSEKSDLESVGCKRSGSLNFPGGDGNGMDSGCSSWGAGGPSSSDTPRVKTGGCM
GPTPGATVNSSSADRPKEQVVLTSGDGIALPQKVLFPAERLSLKWNQVHRIGSGLQNLGN
TCFLNSTLQCLTYTAPLTNYMLSREHSKTCHEPGFCMMCTMQNHITQVFANSGNVIKPIG
VLNELKRIAKHFRFGSQEDAHEFLRYTVDAMQKSCLPLNKLDRQTQATSFIHQVFGGYLR
SRVKCFNCKAVSDTFDPYLDVALEIKTAPSITKALEQFVKPEQLDGENAYRCAKCKKMVP
ASKRFTIHRSANVLTISLKRFANYNGGKIAKDVRYAECLDLRPFMSQSHGEPQVYVLYAV
LVHSGFSCHAGHYYCYVKASNGQWYQLNDSSVLVSDIRSVLNQQAYVLFYIRSPDLKNGG
DYNHTCRTPGPLSQLSPRPILTPRVNIGPRHTSTGFIGPQLPPHMAKNIFHVNGNGLLRD
YPSGSKPSTSSDDSMGKTSYSPLATSSSHPLNRPTGIPDPAKRQKLSFFIGQGKQIRPSS
SSYAQLSSSSQSTSDMSTPQDPRINGTASVNRNGHGASFLVPYGQESSEESDQEGGSGLG
NGTAKPHVNGRKGETVYGPVPRVLTLKTNGIGNGKATMHRNGTNSFSKLSQNGHHNIKHP
EKIHGSGHAMSPGLGSSMPNGAEAHPSGPSKEVYCTTPSQASTSQGLHSADIDSRLSLTP
EKRAKTHSGPLPHHAPSTAAKPPSSLADVGAKPLTDTLRESSSNPGVLFLQPTPRSLSTP
VAPVLSGPGLGATKDLGAPHRGSGEDIRETQNSPAVGLDGKPSSRDGRDQMYSSDREEKG
GLNSSVREEKSGLNCSVREEKSGLNSSDREEKGGLNSSDREQKSGLNSSDREEKGGLNSS
DREEKGGLNSSDREQKSGLNSSDREEKGGLNSSDREEKSVLNSSDRGQKSGLNSSDRDKE
KGRLHSSDCDRDRDRLYSSDRDKDREGDRYHRDRSRERNWDHDSDHYRHRRDHRDRDHHR
SYRDRSLSRDRHRNWESEAFLSQRRYHPRERDRDRCHHHYHHRTSKDRNRDRREHSHHNL
PHREEPHGRSRWRDEGKERCYYPSQETPLPTPLSSSTKPSQSLPALVKRPEPHREERKDS
SEECRAKKPKKSKKKKSKDRERHRENRTFDVNSSDRAADGSSSSKHNKSRRYDTDTEDKS
GGEIHSTQSPEVHRDPNAPREGRRASSSDDERASKKQRYQDDGYDNSYPKKRHRADDNDR
SFSSRDGSPTAAPQNASHFNEHTGNGLGQPNGNSHECSTNGLYNDLRQ
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagatcttcagagaaatctgacctagagtcagtcgggtgcaagcgc
tcaggatcgctgaactttcccggcggtgacgggaacgggatggacagtggctgctccagc
tggggggcggggggcccctcgtcctccgacacccccagggtgaagacagggggctgcatg
ggtcccacccctggagccacagtcaacagcagcagtgcagacaggcccaaggagcaagtg
gtgctgaccagtggggacggcatcgccctgccccagaaggtgctgttcccagccgagcgg
ctcagcctgaagtggaaccaggtccaccgcatcggatcaggtctccagaacctgggaaac
acctgcttcctcaactcgactctgcagtgtctcacctataccgctcccctcactaactac
atgctgtcccgggagcactctaaaacatgtcatgagcctgggttctgtatgatgtgcaca
atgcagaatcacatcacccaggtcttcgccaactctgggaatgtcatcaagcccatcgga
gtcctcaacgagctcaaacggattgcaaagcatttccgttttggcagccaagaggacgcc
catgagttcctgcggtacacagtggacgctatgcaaaagtcctgcctgcctctaaacaaa
ttggacaggcaaacgcaagcaaccagtttcatccatcaagtctttggagggtatctacgg
tccagagtaaaatgtttcaactgcaaagcggtctctgacacgtttgacccttatttggat
gttgctttggaaataaagactgctcccagtatcacaaaggctctggaacagtttgttaag
cctgagcagctagatggagagaatgcctacagatgcgctaagtgtaagaagatggttcca
gcctctaagagattcaccatccaccgcagcgctaatgtgctcaccatctcactgaagcga
tttgccaactacaacgggggcaagatcgctaaggatgtaaggtatgctgagtgcctagac
ctgcgtcccttcatgtctcaatcccacggcgagccccaggtctacgtgctctatgctgtc
ctggtgcactctggcttcagctgccacgctggacactactactgctacgtcaaagctagc
aatggccagtggtaccagttgaatgactcctctgtgttggtcagtgacatcaggtcagtc
ctcaaccagcaggcgtacgtcctcttctacatcaggtcacctgatctgaagaatggaggg
gactacaatcacacgtgccggaccccggggcccctcagccagttgtccccccgccccatc
ctcacaccccgggtcaacattgggccacgacacaccagcactggcttcatagggccacag
ctgcccccacacatggccaagaacatctttcacgtcaatgggaacggcttgctaagggac
tacccctctggctctaagcccagcaccagcagtgacgacagcatgggcaagactagctac
agcccgctcgccacctcttcctcccatcctctcaaccgtcccacaggcatccctgaccct
gccaagcgccagaagctctccttcttcattggtcagggcaaacagatccgcccctcatca
tcctcttatgcccagctgtcctcttcgtcacagtctacatcagacatgtctacgccccag
gatcctcgcattaacggcactgcctccgttaacagaaacggtcacggggcgtcgttcctg
gtgccgtacggccaggagtcgtctgaggagtcggaccaggagggaggcagtggtctgggg
aacggcacggctaagcctcacgttaacgggaggaagggagagaccgtctacggccccgtc
cccagagtgctgaccctcaagaccaacggcatcggtaatggcaaggctaccatgcaccgt
aacgggaccaacagcttctccaaactcagtcagaacggacaccacaacatcaaacaccct
gagaagatccatggtagcggtcatgcgatgtcgcccggtttgggttccagcatgcctaat
ggggcggaggctcaccccagtggcccaagcaaagaggtgtattgcaccacccccagccag
gccagcacctctcaaggcctgcacagtgccgacatcgacagccgcctctccctcacccca
gagaaaagggctaaaactcactctggccccctccctcaccacgcaccatcaaccgctgct
aaacctccatcctcattggctgatgttggagctaaaccacttaccgacaccttgagggaa
tccagctccaaccctggggtcttattcctccagcccaccccccgctccctcagtacccca
gtcgccccagtcctctccgggccaggcctgggagccacgaaagatcttggagccccacac
aggggatctggggaggacatcagggagacccagaacagcccagctgtagggctggatgga
aagcccagctccagagatggaagagaccagatgtactcttccgatcgggaggagaaaggc
gggttgaactcttccgttcgggaggagaaaagcgggttgaactgttccgttcgggaggag
aaaagcgggttgaactcttccgatcgggaggagaaaggcgggttgaactcttccgatcgg
gagcagaaaagcgggttgaactcttccgatcgggaggagaaaggcgggttgaactcttcc
gatcgggaggagaaaggcgggttgaactcttccgatcgggagcagaaaagcgggttgaac
tcttccgatcgggaggagaaaggcgggttgaactcttccgatcgggaggagaaaagcgtg
ttgaactcttccgatcgggggcagaaaagcgggttgaactcttccgatcgggataaggag
aaaggccgactacattcttcggactgcgatagggatcgagaccggctgtactcttctgac
cgggataaagacagagaaggggataggtaccaccgggacaggagccgtgaacgcaactgg
gaccatgactcagaccactaccggcaccggcgagaccaccgagacagagaccaccaccgg
tcgtaccgggaccgctcgctcagccgggacagacaccggaactgggagtctgaggcattc
ctctcacagcgacgctatcaccccagagagagggacagggaccgctgtcaccaccattac
caccacagaacgagtaaggacaggaatagggacaggagggagcacagccaccacaacctc
ccacacagagaggagcctcatggacgctcaaggtggagggatgaaggtaaagagaggtgt
tactacccttcacaggagacccctctgcccaccccactgagctccagcaccaagcccagt
cagtccctcccagccctggtgaaacgacccgagcctcacagagaggagagaaaggacagc
tctgaggagtgtcgggccaagaaacccaagaagagcaagaagaagaagtccaaggacaga
gagaggcaccgagagaataggacctttgacgtgaattcctctgacagggcagccgacggc
agcagttcctccaaacacaacaaaagtaggaggtacgacactgacacggaggataagtca
gggggtgagatccactctacccagagtcccgaggtgcaccgtgaccccaatgccccccgg
gagggtcgcagggcaagcagcagcgacgatgagagggcgagcaagaagcaacgttaccag
gacgatggctatgacaacagctaccctaagaaacgccatcgcgccgatgacaacgaccgc
tccttctcctctcgtgatggatcaccaacagcagctcctcaaaacgcatcgcacttcaac
gaacacacaggtaatggcttaggtcaacccaatggaaactcccacgaatgttctaccaat
ggactgtacaatgaccttagacagtag
DBGET
integrated database retrieval system
