Oncorhynchus mykiss (rainbow trout): 110502931
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Entry
110502931 CDS
T07259
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
KO
K17908
autophagy-related protein 18
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04136
Autophagy - other
omy04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110502931
04136 Autophagy - other
110502931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110502931
03029 Mitochondrial biogenesis [BR:
omy03029
]
110502931
Membrane trafficking [BR:
omy04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
110502931
Mitochondrial biogenesis [BR:
omy03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
110502931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
WD40
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_Vps41
CPSF_A
Beta-prop_NWD2_C
Beta-prop_RSE1_2nd
Beta-prop_HPS5
EIF3I
Motif
Other DBs
NCBI-GeneID:
110502931
NCBI-ProteinID:
XP_036816614
Ensembl:
ENSOMYG00000024931
LinkDB
All DBs
Position
23:complement(50052834..50067792)
Genome browser
AA seq
444 aa
AA seq
DB search
MEERETPDGPGGPQGLISASFNQDTTSLSVGTKSGYRLFSVTSVDKMDCIHEGAECPDVY
IVERLFSSSLVAVVSLSMPRRMNVYHFKRGTEICNYSYSNNILSVRLNRQRLVVCLEESV
YIHNIKDMKLLKTLLNTPHNPSGLCALSVNHGNSYLAYPGSQTIGEIMVYDTNNLSKVTM
IPAHDSPLAALTFNASGTKLASASERGTVIRVFTIPEGQRLFEFRRGMKRYVSISSLSFS
SDAQFLCASSNTETVHIFKLEQHSPSRDGESPTWGAYVGKMFTAASTYLPSQVSDMMHQD
RAFATVRLNMFGLKNVCALSTVQKLPRLLVASSDGHLYIYNIDPQDGGECVLVRKHRLFE
GDEAPQEAQQEEKESEDGRSLPPGPSYAATVSLPSTAPSSTTLTGYSEDGGAEKGDVIPE
HEFAEGPVCLDDENEFPPVSKQTN
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacgggagacacccgacggtccgggagggcctcaaggcttgatcagcgcctcg
ttcaaccaggacaccacgtctctatcagtgggcactaagtcaggctacagactcttctct
gtcacctcagtggacaagatggactgcatccatgaaggagcggagtgtccagacgtgtac
attgtggagcggttgttctccagcagtctggtggcggtggtcagtctctccatgccccga
cgtatgaacgtctaccacttcaaaaggggaacagagatctgcaactatagctactctaac
aacatcctctcagtccggctcaacagacagaggctggtggtgtgtctggaggagtcagtc
tacatccacaacatcaaagacatgaagctgctgaagacgctgctcaacacgccccacaac
ccctcaggtctctgtgccctctctgtgaaccatggtaactcctacctggcgtaccctggc
agtcaaaccatcggagagatcatggtctatgacaccaacaacctgagcaaggtgacgatg
atcccagcccatgacagtcccctggcagccctcacattcaacgcgtcaggaaccaaactc
gccagtgcctccgagaggggtacagtgatcagagtgttcaccatcccagagggacagagg
ctgtttgagttccgtagagggatgaagaggtatgtgagtatcagctcgttgtcctttagt
tcagacgcacagttcctctgtgcctccagcaacacagagacggtccatatcttcaaactg
gaacagcacagccccagtcgagatggcgagtctcctacgtggggtgcctacgtggggaag
atgttcacagcagccagcacctaccttccctcccaggtctctgacatgatgcaccaagac
cgggcctttgccaccgtacgactcaacatgttcggactcaagaacgtatgcgccttgtcc
acggttcagaagctacctcggctgctggtggcatcatcagatggacatctctacatctat
aacattgacccacaggacggaggagagtgtgttctggtcaggaaacacaggctatttgaa
ggagatgaggcgccacaggaagcacaacaggaagagaaggagtcagaggatggaaggtcc
ctcccacccggcccatcatacgctgccactgtgtccctcccctcgactgcaccctcttct
accactctcacaggctactcagaggatggcggggctgagaaaggggatgtgatccctgaa
catgagtttgccgagggacccgtctgtctggatgatgagaacgagtttcctcccgtcagc
aaacagaccaactga
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integrated database retrieval system
