Oncorhynchus mykiss (rainbow trout): 110502935
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Entry
110502935 CDS
T07259
Name
(RefSeq) ras-related C3 botulinum toxin substrate 1
KO
K04392
Ras-related C3 botulinum toxin substrate 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
omy04145
Phagosome
omy04148
Efferocytosis
omy04310
Wnt signaling pathway
omy04370
VEGF signaling pathway
omy04510
Focal adhesion
omy04520
Adherens junction
omy04530
Tight junction
omy04620
Toll-like receptor signaling pathway
omy04810
Regulation of actin cytoskeleton
omy05100
Bacterial invasion of epithelial cells
omy05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110502935
04310 Wnt signaling pathway
110502935
04370 VEGF signaling pathway
110502935
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110502935
04148 Efferocytosis
110502935
09144 Cellular community - eukaryotes
04510 Focal adhesion
110502935
04520 Adherens junction
110502935
04530 Tight junction
110502935
09142 Cell motility
04810 Regulation of actin cytoskeleton
110502935
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
110502935
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110502935
05100 Bacterial invasion of epithelial cells
110502935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110502935
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110502935
04031 GTP-binding proteins [BR:
omy04031
]
110502935
Membrane trafficking [BR:
omy04131
]
Exocytosis
Small GTPases and associated proteins
Rho GTPases
110502935
Endocytosis
Lipid raft mediated endocytosis
Arf6-dependent endocytosis
110502935
Macropinocytosis
Ras GTPases
110502935
Others
NADPH oxidases (Nox) and associated proteins
Nox associated proteins
110502935
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110502935
Exosomal proteins of other body fluids (saliva and urine)
110502935
Exosomal proteins of colorectal cancer cells
110502935
Exosomal proteins of bladder cancer cells
110502935
GTP-binding proteins [BR:
omy04031
]
Small (monomeric) G-proteins
Rho Family
Rac/Cdc42 [OT]
110502935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
CagD
Motif
Other DBs
NCBI-GeneID:
110502935
NCBI-ProteinID:
XP_036816618
LinkDB
All DBs
Position
23:49502939..49509589
Genome browser
AA seq
192 aa
AA seq
DB search
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP
PVKKRKRKCSLL
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccatcaagtgtgttgtagtgggggacggagctgtgggtaaaacatgcctgctc
atcagctacaccaccaatgcgttccccggggaatatatacccacagtctttgacaactac
tctgccaatgtcatggtcgatgggaaaccagtgaatctgggtctatgggatacagcagga
caggaagactacgacagactccgaccactgtcctatccacagacggatgtgttcttgatt
tgcttctctctcgtgagtcctgcctcctttgaaaacgtccgtgccaagtggtacccagag
gtaagacaccactgccccaacacccccatcatcctggtgggcaccaagctggatctgaga
gacgacaaggacaccatcgagaagctgaaggagaagaaactcacccccatcacctacccc
cagggcctggccatggccaaagagattggagcagtaaagtacctggaatgctcagccttg
acacagcgtggccttaagacagtatttgacgaagccatccgggcggtcctgtgtccccca
cccgtcaagaagaggaagaggaagtgctcactactctaa
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