KEGG   Oncorhynchus mykiss (rainbow trout): 110502998
Entry
110502998         CDS       T07259                                 
Name
(RefSeq) homeobox protein SIX2 isoform X1
  KO
K19472  homeobox protein SIX2
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:omy03000]
    110502998
Transcription factors [BR:omy03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain SINE
    110502998
SSDB
Motif
Pfam: SIX1_SD Homeobox_KN Homeodomain HTH_3 HTH_NDX Phage_mat-A
Other DBs
NCBI-GeneID: 110502998
NCBI-ProteinID: XP_021437035
Ensembl: ENSOMYG00000034438
LinkDB
Position
23:complement(55981267..55984852)
AA seq 289 aa
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRNVLREWYTHNPYPSPREKRELAEGTGLTTTQVSNWFKNRRQRDR
AAEAKERYEENNENSNTNSHNPLTSSMNGNKTLLGSSDDDKTPSGTPDHISSSPAMLLAS
NSGLQMHGLAPPPGPSAILVSSLDSVHHHHSLHDTILNPMSSNLVELGS
NT seq 870 nt   +upstreamnt  +downstreamnt
atgtctatgcttccaacttttggctttacgcaagagcaagttgcgtgcgtctgcgaggtc
ctccaacagggtggaaacatcgaacggctcgggcgatttttgtggtctttacccgcgtgt
gagcacctccacaaaaatgaaagtgttctcaaagctaaagctgtggtcgcctttcacaga
ggcaatttcagagagctttataaaatccttgagagccaccaattttcccctcacaatcac
ccgaagctgcaacagctttggctcaaagcacactacatcgaggcggagaagctccgaggc
cgccctctcggggctgtgggaaagtaccgcgtccgcagaaagttccccctgcctcggtct
atctgggacggcgaggagacaagttactgtttcaaagagaagagcaggaacgtactcaga
gaatggtacacgcataacccctacccttccccgcgggagaagagggagctcgccgagggc
acagggttgacaaccacacaagtcagtaactggttcaaaaacagacggcaaagagaccgc
gcggcagaagctaaggaaaggtacgaggaaaacaacgaaaactccaacaccaacagccac
aacccattgacttcttccatgaatggaaataaaacacttttggggagctcagacgacgac
aaaacgccctcagggactccggatcacatttcctcgagcccggcaatgctcctcgcttca
aactccgggctgcagatgcacggcctcgcgcctccacctgggcctagcgccatcctcgtg
tccagccttgactccgtgcaccatcatcactctttgcacgacactatactgaaccctatg
tcgtctaacctggtcgaactcggctcttaa

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