Oncorhynchus mykiss (rainbow trout): 110503031
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Entry
110503031 CDS
T07259
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like isoform X1
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
110503031
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110503031
Transporters [BR:
omy02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
110503031
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Gene cluster
GFIT
Motif
Pfam:
SNF
UL148
Motif
Other DBs
NCBI-GeneID:
110503031
NCBI-ProteinID:
XP_036816662
Ensembl:
ENSOMYG00000032303
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Position
23:51956172..51976111
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AA seq
581 aa
AA seq
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MAAPLSVGRHELLPGSVHYTQQRVKERGQWDSKMEFILTVAGAIIGLGNIWRFPYLCYKN
GGGAFFIPYILYLVTCGIPLFILETALGQYTSQGGITCWRKICPLFEGLGYAAQVITIYG
CMTYIVILAWAFHYLFSSFTVDLPWANCNNDWNTDACVTFGTNNVTSNWTVPLLNTSSSV
VEFWQRRVLRISDGIESLGGIRWELALCLLLSWAICYFCIWKGVRSTGKAACFTATFPYV
MLLVLFVRGVTLPGAIDGIFYYMYPNATRLADPQVWMDAGTQVFFSYAICLGYLTSLGSY
NKYNNNCYKDSFYLCLLNSGTSFLSGFAIFSILGYMAGEQGVDISMVAESGPGLVFIVYP
QAVSLLPCPQFWAVCFFTMIILLGLDSQFVGLESLMTSVTDVYPNVLRKGHRRELLLLLI
CCCCCLVGLIMVTEGGLYIIQLFDHYVCSGATLLLLSICQSFSIGWIYGAERFCDNIEDM
IGYRPSSLVKYCWLYITPTMCTGTFVFSVLKYSPLKFNNTYVYPWWAYGLGWFLAMSSLS
LIPITMVYKLYRGQGTFWHVSGISDFLLNISTRVKNDLLLH
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcctctctccgtaggcagacacgagcttctcccaggatccgtgcattacacc
caacagagggtcaaggagcgtggccagtgggatagtaaaatggagttcattctaactgtg
gctggtgctattattggacttggaaatatatggaggtttccatatctttgttacaagaat
ggtgggggtgccttcttcatcccgtatatcctgtacctggtgacctgtggcatccctctg
ttcatcctggagacggctcttggacagtacaccagccaggggggcatcacctgctggagg
aagatctgcccgctgtttgaaggattgggctacgccgcccaggtgatcactatatatgga
tgtatgacctacattgtgatcctggcctgggctttccactacctgttttcatccttcact
gttgacctgccatgggccaactgtaataatgactggaacacagatgcttgtgtcacattt
ggtaccaataatgtaaccagcaattggactgttcctctcctgaatacgtcatcttcagtt
gtagagttttggcagcggcgagtgctgcggatatcggatggaatagaatcacttggaggc
attagatgggagctggccctgtgccttctgctgtcctgggccatctgctacttctgtatc
tggaaaggagtgaggtctacaggaaaggcagcgtgcttcacggcaacgttcccctatgtc
atgctactggtgctattcgtccgaggagtgaccctacctggagctatagatggcatattc
tactacatgtatcccaatgctacacggcttgctgatccacaggtttggatggatgcagga
acccaggtatttttttcttatgccatatgcctgggatacctgacttctctcggaagctac
aacaaatacaacaacaactgttacaaagactccttctacctgtgcttgttgaacagtggg
accagcttcctgtctggttttgctattttttccatcctgggttatatggctggagaacag
ggtgtggacatctctatggtagctgagtcaggtcctggcctggtgttcatagtgtaccca
caggcagtgtccctgctcccctgtcctcagttctgggccgtgtgtttcttcaccatgatc
atcctgttaggattggacagccagtttgtcggccttgagagccttatgacctcggtaacg
gatgtctaccccaacgtcctcagaaagggccaccggagggagctactgctgctgctcatc
tgctgttgctgctgcctggtcggactcatcatggtcacagagggtggcctctacatcata
cagctgtttgatcattatgtgtgcagtggtgccactctgctactcctctccatatgccag
tctttcagtattggatggatatatggtgctgaacgtttctgtgacaacattgaggatatg
attggctacaggccctcctctctggtgaagtactgttggctatacatcacccctactatg
tgcacaggaacctttgtgttctcggtgctgaagtacagccctctgaagttcaacaacacc
tatgtgtacccctggtgggcttacgggctgggatggttcctggctatgtcctccctctct
ctcattcccatcaccatggtctacaaactgtaccgaggacaagggacattttggcacgtc
agtggcatttcagattttctcttgaatattagcactcgtgtgaaaaacgacttattgttg
cattaa
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