KEGG   Oncorhynchus mykiss (rainbow trout): 110503174
Entry
110503174         CDS       T07259                                 
Symbol
pdgfd
Name
(RefSeq) platelet-derived growth factor D
  KO
K05450  platelet derived growth factor C/D
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010  MAPK signaling pathway
omy04020  Calcium signaling pathway
omy04510  Focal adhesion
omy04540  Gap junction
omy04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    110503174 (pdgfd)
   04020 Calcium signaling pathway
    110503174 (pdgfd)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    110503174 (pdgfd)
   04540 Gap junction
    110503174 (pdgfd)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    110503174 (pdgfd)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:omy04052]
    110503174 (pdgfd)
Cytokines and neuropeptides [BR:omy04052]
 Cytokines
  Growth factors (RTK binding)
   110503174 (pdgfd)
SSDB
Motif
Pfam: CUB PDGF FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 110503174
NCBI-ProteinID: XP_036817419
LinkDB
Position
24:32782629..32870740
AA seq 367 aa
MNFSGRVVLALLLALLVGFTGGTQAQVVSAKVMRSSNLRRDDLYRKEEVVTVTAAGGAIQ
SPRFPNAYPRNLQLSWKLLSPHNTRIVLEFDSHFALEEPENEVCRYDFVEVEDISETSTI
VWGRWCGQRVPPRLTSKTNTLKVTFKSDDYFVAKPGFKLNYSLLDNSLPTASRTNWEAVT
QMDDAPSLLAPVVTDVPLTAAALDQTIAAFNTVEQLLRHLNPDSWRQDLDSLYRETAMYR
PRAYQHNRQNKIDLDRLYDDVKHYSCTPRNYSVNLREELRATNAVFFPRCLLVQRCGGNC
ACGTDNWNGCTCSPAKTSDKLHEVLKYAPEVGGFSRRRTARVRWVLEEVHLMHHERCDCV
CPSRPPR
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgaacttctctgggcgcgtggtacttgcgctgttgctcgccctgctggtgggctttacc
gggggcacacaagcccaagtagtgtccgccaaggtgatgcggtcgtcaaacttgaggcga
gatgacttgtaccggaaagaagaggtcgtcacggtaactgcagctgggggagccatccag
agcccccgcttcccgaacgcctacccccggaacctgcagttgtcatggaaactactgtcg
ccccacaacacccgcatcgtcctggagtttgactcccactttgcgctggaggaaccagag
aacgaagtctgcaggtatgactttgtggaggtggaggacatctcagagaccagtactatt
gtctgggggagatggtgtggtcagagagtccccccacgcctcacctccaaaaccaacacc
ctcaaagtcaccttcaagtcagacgactacttcgtggccaagcctggcttcaaactcaac
tactctctactggataattctcttcctacagcatccaggacgaactgggaagctgtgacc
cagatggatgatgctccgtcactgttggccccagtggtgactgatgttcctctgacagca
gcagcattggaccagaccatagcagccttcaacacagtggagcagctcctccgccacctc
aaccctgacagctggagacaggacctggacagcttgtacagagagacagccatgtacaga
ccccgggcctaccagcacaacagacagaacaagattgacctggaccgtctgtatgatgac
gtgaagcactacagctgtacacctcggaactactctgtcaacctgagggaggagctgagg
gccaccaacgccgtgttcttcccacgatgcctactagtgcagcgctgtggggggaactgt
gcatgtggtacagacaactggaacggctgtacctgcagcccggccaagaccagtgacaaa
ctacacgaggtgttgaagtatgctcctgaggtgggaggtttttcgcggcgtcggacagct
cgtgtccgctgggtcctagaggaggtccatctcatgcaccacgagcgctgtgactgtgtt
tgtccctccagaccaccccgttga

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