Oncorhynchus mykiss (rainbow trout): 110503174
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Entry
110503174 CDS
T07259
Symbol
pdgfd
Name
(RefSeq) platelet-derived growth factor D
KO
K05450
platelet derived growth factor C/D
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
omy04020
Calcium signaling pathway
omy04510
Focal adhesion
omy04540
Gap junction
omy04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110503174 (pdgfd)
04020 Calcium signaling pathway
110503174 (pdgfd)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110503174 (pdgfd)
04540 Gap junction
110503174 (pdgfd)
09142 Cell motility
04810 Regulation of actin cytoskeleton
110503174 (pdgfd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
omy04052
]
110503174 (pdgfd)
Cytokines and neuropeptides [BR:
omy04052
]
Cytokines
Growth factors (RTK binding)
110503174 (pdgfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
110503174
NCBI-ProteinID:
XP_036817419
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All DBs
Position
24:32782629..32870740
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AA seq
367 aa
AA seq
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MNFSGRVVLALLLALLVGFTGGTQAQVVSAKVMRSSNLRRDDLYRKEEVVTVTAAGGAIQ
SPRFPNAYPRNLQLSWKLLSPHNTRIVLEFDSHFALEEPENEVCRYDFVEVEDISETSTI
VWGRWCGQRVPPRLTSKTNTLKVTFKSDDYFVAKPGFKLNYSLLDNSLPTASRTNWEAVT
QMDDAPSLLAPVVTDVPLTAAALDQTIAAFNTVEQLLRHLNPDSWRQDLDSLYRETAMYR
PRAYQHNRQNKIDLDRLYDDVKHYSCTPRNYSVNLREELRATNAVFFPRCLLVQRCGGNC
ACGTDNWNGCTCSPAKTSDKLHEVLKYAPEVGGFSRRRTARVRWVLEEVHLMHHERCDCV
CPSRPPR
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaacttctctgggcgcgtggtacttgcgctgttgctcgccctgctggtgggctttacc
gggggcacacaagcccaagtagtgtccgccaaggtgatgcggtcgtcaaacttgaggcga
gatgacttgtaccggaaagaagaggtcgtcacggtaactgcagctgggggagccatccag
agcccccgcttcccgaacgcctacccccggaacctgcagttgtcatggaaactactgtcg
ccccacaacacccgcatcgtcctggagtttgactcccactttgcgctggaggaaccagag
aacgaagtctgcaggtatgactttgtggaggtggaggacatctcagagaccagtactatt
gtctgggggagatggtgtggtcagagagtccccccacgcctcacctccaaaaccaacacc
ctcaaagtcaccttcaagtcagacgactacttcgtggccaagcctggcttcaaactcaac
tactctctactggataattctcttcctacagcatccaggacgaactgggaagctgtgacc
cagatggatgatgctccgtcactgttggccccagtggtgactgatgttcctctgacagca
gcagcattggaccagaccatagcagccttcaacacagtggagcagctcctccgccacctc
aaccctgacagctggagacaggacctggacagcttgtacagagagacagccatgtacaga
ccccgggcctaccagcacaacagacagaacaagattgacctggaccgtctgtatgatgac
gtgaagcactacagctgtacacctcggaactactctgtcaacctgagggaggagctgagg
gccaccaacgccgtgttcttcccacgatgcctactagtgcagcgctgtggggggaactgt
gcatgtggtacagacaactggaacggctgtacctgcagcccggccaagaccagtgacaaa
ctacacgaggtgttgaagtatgctcctgaggtgggaggtttttcgcggcgtcggacagct
cgtgtccgctgggtcctagaggaggtccatctcatgcaccacgagcgctgtgactgtgtt
tgtccctccagaccaccccgttga
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