Oncorhynchus mykiss (rainbow trout): 110503283
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Entry
110503283 CDS
T07259
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110503283 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110503283 (exosc5)
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110503283 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
110503283
NCBI-ProteinID:
XP_021437333
Ensembl:
ENSOMYG00000036460
LinkDB
All DBs
Position
24:complement(38765339..38770808)
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AA seq
219 aa
AA seq
DB search
MDVCASSSPTLREFGCEQNLLSRPDGSSSFVQGDTSVLAGVYGPAEVKVSKEIYDRATLE
VVMQPKVGLPGVRERAREQCVRETCEASLLSTLHPRSSLTLVLQVVHDDGSLLSCFLNSA
CMALMDAGLPMSCLFAGVTCAIDTDGQVITDPNAAQEKESRALMTFAIDSTERRVMMSST
RGSFTVHELQQCIAVSQKASDKIFQFYRDSVRRRYSKTL
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgtgtgcatcttcgagtcctactttgagggagtttggctgcgaacagaattta
ctatcacgacctgatggatcgtcgtccttcgtccaaggagacaccagtgtattagctgga
gtgtatggcccggcggaggtgaaggtcagtaaggagatctatgacagagctaccctggag
gtggtgatgcagcccaaagtgggactaccaggtgtcagagagcgagccagagaacagtgt
gtgagggaaacatgcgaggcgtctcttctctccacccttcatccacgctcctccctcact
ctcgtcctacaagtggtccatgatgacggttcactgttgtcctgttttctgaactcagcc
tgtatggccctgatggacgcgggcctgcctatgagctgcctgttcgctggggtcacctgt
gccatcgatacagatggccaggtcattaccgaccccaacgcagcacaggagaaggaaagt
cgagctttgatgaccttcgctattgacagtaccgagcgcagagtgatgatgtcatccacc
agagggtcttttacagttcacgagctgcaacagtgtatagctgtcagtcagaaagcatcg
gacaagatcttccagttctacagagattctgtcagacgaagatattccaagacactctga
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