Oncorhynchus mykiss (rainbow trout): 110503317
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Entry
110503317 CDS
T07259
Name
(RefSeq) sodium/calcium exchanger 2
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04020
Calcium signaling pathway
omy04260
Cardiac muscle contraction
omy04261
Adrenergic signaling in cardiomyocytes
omy04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
110503317
04020 Calcium signaling pathway
110503317
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
110503317
04261 Adrenergic signaling in cardiomyocytes
110503317
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110503317
00536 Glycosaminoglycan binding proteins [BR:
omy00536
]
110503317
Transporters [BR:
omy02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
110503317
Glycosaminoglycan binding proteins [BR:
omy00536
]
Heparan sulfate / Heparin
Others
110503317
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
110503317
NCBI-ProteinID:
XP_036817044
Ensembl:
ENSOMYG00000035680
LinkDB
All DBs
Position
24:complement(10160894..10263430)
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AA seq
976 aa
AA seq
DB search
MALLSTTLSASVPFLLFLLLPLPSPCALESLRGGGGEEENRSISTMSYPSMSPEFWSNSS
TGLGSSSKCSQPVVCRPGTLLPVWKPLSPGLGDQVARAVVYFTCLMYMFLGVSIIADRFM
ASIEVITSQEKEVTITMPGGETSVATVRIWNETVSNLTLMALGSSAPEILLSVIEVCGHG
FEAGELGPGTIVGSAAFNMFVIIAICVWVIPEGETRKIKHLRVFFITAFWSIFAYIWLFL
ILSVISPGVVEVWEALVTLLYFPVCVILAWIADRRLLFYKYMAKRYRADKHGIVVETEGD
TTPKGFEMIMDGKFPPRGGAVGMMPSENCQDGANNAAGTVAYLPHSNSTMVTVENTKELD
ESRKEVIRILKQLKQKFPDKELDQLVDLANYYALLHQQKSRAFYRIQATRMMTGAGNVLK
RHAADHSRRAAAVDEEVVCEDDDLAECSRLAFESTHSQCMENCGVLRLAVVCQGGLGEST
FYVDYRTEDGSANAGSDYEYSEGTLVFKPGDTRKEIKVGIIDDDIFEEDEHFFVRLLNLR
IGDAEGMFESDEPGARPKGRLVEPLVATVTILDDDHAGFFTFRNRLVRVSESVGTMEISV
VRNSGARGTVILPYHTEEGTAKGGGVDYEDTQGELEFSNDQTTQTLQVRIIDDEEYEKKE
NFFIVLEEPRWLKRGISALLLNQEDPDGQMSAEEEEARRIAEMGKPILGEHSRLEVVIEE
SYEFKSTVDKLIKKTNLALVIGTHSWREQFVEAVTVSAGDGDDDDEEGREERLPSCYDYV
MHFLTVFWKVLFAFVPPTEYWNGWACFFVSISVIGILTAIIGDLASHFGCTVGLRDTVTA
VVFVALGTSIPDTFASKVAATQDQHADASVGNVTGSNAVNVFLGIGVAWSVAAVYWKVQG
KEFRVDPGSLAFSVTLFTSFAFICMGVLLFRRRPSIGGELGGPRTARIITSLLFLGLWFL
YVLFSSLEAYCHIEGF
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggcactcctctccaccactctctctgcctctgtccccttcctcctcttcctcctcctc
ccccttccttcgccctgcgccctggagtctctacgaggaggaggaggagaggaagagaac
cgctccatctccaccatgtcctatccctccatgtctccggagttctggagcaacagcagc
acggggctgggcagcagttcaaagtgctcgcagccggtggtgtgcaggccgggcaccctg
ctgcccgtgtggaagcccctgagccccgggctgggcgaccaggtagccagggccgtggtc
tacttcacctgtctcatgtacatgttcctgggagtgtccatcatcgcagaccgcttcatg
gcctctatcgaggtcataacctcacaggagaaggaagtgaccatcaccatgccaggtgga
gagacgtctgttgccactgtacgtatctggaacgagacggtgtccaacctgactctgatg
gctctaggctcctccgccccagagatcctgctgtcggtcatagaggtgtgtgggcacggg
tttgaggcgggtgagctgggccctggcaccattgtgggcagcgccgccttcaacatgttt
gtgatcatcgccatctgtgtgtgggtcatccctgaaggagagaccaggaagatcaaacac
ctgcgtgtgttcttcatcacagccttctggagtatcttcgcctatatctggctcttcctc
atcctctctgtcatctcacccggagtagtggaggtgtgggaggccctggtcaccctgctc
tacttcccagtgtgtgtgatcctggcctggatcgccgaccgacgccttcttttctacaag
tacatggccaagcgttaccgcgctgacaagcacggcatcgtcgtggagacggagggggac
acaactccgaaaggcttcgagatgattatggacggaaagttcccaccaaggggaggggcg
gtgggaatgatgcccagtgagaactgccaggatggggccaacaatgcggcgggcaccgtg
gcctacctgccccactccaacagcaccatggtgaccgtagagaataccaaggagctggac
gagagccgcaaggaggtgatccgcatcctgaagcagctgaagcagaagtttccggacaag
gagctggatcagctggtagatctagccaactactacgccctcctccatcaacagaagagc
cgcgccttctaccgcatccaggctacgcgcatgatgaccggcgccggcaacgtgctcaag
aggcacgccgccgaccactctcgccgcgccgccgccgtggacgaggaagtggtctgcgag
gacgatgacctggctgagtgcagccgcctggcgttcgagagcacccacagccagtgtatg
gagaactgcggcgtactgaggttggctgtggtgtgtcaagggggcctgggggagagtacc
ttctacgtggactaccggaccgaggacggctcggccaacgccgggtctgactacgagtac
agcgagggaacgctggtgttcaaacccggagatacccgcaaggagatcaaggtcggcatc
atcgatgatgacatcttcgaggaggacgagcactttttcgtgcggctgctcaacttgcgc
atcggtgacgccgaggggatgttcgagagtgatgagccaggtgcgagacccaagggtcgc
ctggtggagccactggtcgccacggtgaccatcctggacgacgaccatgctggattcttc
acattccgtaatcggctggtgcgcgtcagcgagagtgttggcaccatggagatctcagtg
gtgcggaactcgggcgcccgcggcacggtgatcctgccctatcacacggaggagggcacg
gcgaaggggggcggcgtggactacgaggacacccagggagagctggagttctccaacgac
cagacaactcagaccctgcaggtgaggatcattgacgatgaggagtatgagaaaaaggag
aacttcttcatcgtactagaggaaccacgctggctgaagaggggaatctcagcccttctg
ctcaaccaagaggatcctgatggccagatgagtgcagaggaggaggaggcgaggcgcatt
gcagagatgggaaagcccatcttgggggagcacagccggctggaggtggtcattgaggag
tcttatgagttcaagagcaccgttgacaagctcattaagaagaccaacttggcccttgtg
attggcactcactcctggagggagcagttcgtggaagctgtgactgtcagcgcaggggat
ggtgatgacgatgacgaggaggggcgtgaagagcgtctgccatcctgctacgactacgtc
atgcactttctgacggtgttctggaaggttctgttcgccttcgttccgcccaccgagtac
tggaatggctgggcctgcttcttcgtgtccatctcggtcatcggtatcttgactgccatc
atcggggacctggcctcccactttggctgcactgtgggcctcagggacactgtcactgct
gtggtgtttgtggctcttggcacctctattcctgacacgtttgccagcaaggtggcggcc
acgcaggaccagcacgctgatgcgtcggtgggcaacgtgactggcagcaatgcggtcaac
gtgttcctgggcatcggggtggcgtggtcagtggcggccgtctactggaaggtgcagggc
aaggagttccgcgtggacccaggctccctggccttctccgtcaccctcttcaccagcttc
gccttcatctgcatgggcgtgctgctgttccgccggcggccctctatcgggggggagctg
ggcgggccgcggacagcacgcatcatcaccagcctcctcttcctgggcctctggttcctc
tatgtcctcttctccagcctggaggcctactgccacatagagggcttttag
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