Oncorhynchus mykiss (rainbow trout): 110503348
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Entry
110503348 CDS
T07259
Symbol
frem2b
Name
(RefSeq) FRAS1-related extracellular matrix protein 2 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04512
ECM-receptor interaction
omy04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110503348 (frem2b)
04518 Integrin signaling
110503348 (frem2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
omy04091
]
110503348 (frem2b)
Lectins [BR:
omy04091
]
C-Type lectins
Lecticans
110503348 (frem2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
C1orf162
TMEM154
FAM176
Motif
Other DBs
NCBI-GeneID:
110503348
NCBI-ProteinID:
XP_036817199
Ensembl:
ENSOMYG00000020588
UniProt:
A0A8C7VRL7
LinkDB
All DBs
Position
24:14971576..15082400
Genome browser
AA seq
3213 aa
AA seq
DB search
MKFNLNRRELRRERAWYTSSRMRVRHLSTLILYSHNFSCIGLSFFSGFYVHNSCLCSGFS
LQMAWIISRRWKRQGTGAVFLLSALIAVIVTGDSAAQVFDSYGLSYALRSELSEDAILVA
NNGIRVPFGRAVFIDPINDLVIQVQPGDRCSITVLDNDPLSQRPGQLSPKKFPCEFGPND
VKYSHFGSRSPPRDRVRLQLRYDTHTDTIIIPFMMEVEVIFTQLEVLTRNMPLTVDKLLG
TSNPIDRKILEFTYDRSEHQCKITSLSSGSALPRYGKLVDEGKLGEMVDCDEFIKMNICY
QHTSAHKSPNRDYFPMIVELQDKEGNFLKQEFFQMMVRIKDGEENTAPKPSFVAMMMMEV
DQFVMTAITPDMLAAEDIESNPDDLIFNITTPLSFEEGYIVSTDDRNLPITSFYQGDLKE
LKIAYKPPSVDSETERIFQIEFEVVDTDGAVSDPFAFMIVVKPMNTLAPVVTRNTGQLLY
EGQSRPLSSSHNLGVSDEDDLDDVKITVVDGLRHGQLTVLGSLRKFFTPADLDGGMVIYQ
HDGSDTYSDNIIFRMTDGKHEVEFLFPLTIVPTDDEPPIINANTGLILFKNQIMLISPLT
LSAADIDSEDSTIRFTIEAPFSPIGEVLLRQSEAPADPSTWRFNAEDELYEKEVTEWLQQ
DITDGKLFYRHTGPHSTDTVMDQFVFRVQDDNDPPNQSEQSSFIIKILPVDDISPELYPG
TTLQMTVHEYQLTYFRKKFLRYTDLDSEDRDLKYTVTQPPTDTDENSPVVLGSIVLTESP
DTVVTEFTQAQVNHHKISYNPPDLELGITAHVLQVQYTVEDTSGNTVTGTFSIFLQPVDN
KPPQITNTGFTVFERGTHIITRAELDTVDLDTDRSQISFTVTQPPQHGTVQYTFTNLTKG
DQFNLLDIANDRISYIHNGDESTSDFFQLDVSDGVHVVTITIRVTVKPIDDETPTITLPA
GTIGSYIDVLENGATEITTNVIQGRDEDTDDLRLTFILEDPPVLGEILVNGVQSGSFTQA
DIINGLVVYTHTSGEIGLTTKYDYFNLTLTDMSDEWTVGGNRVTGVRVQITILPMDSQAP
EVFVGPQFTVVEGEKNVIEILHISADDVDTPNDDLLCTIIVQPTSGYVENISPAPGSEKS
RSGTAISAFTIKDIRQNHIYYVQSIHKGVEPVEDRFTFRCSDGINFSERHFFPIAIIPSN
DEKPEIYMREFVVMEGMNIVIDTPILNGADADIPSDELTFIITKPPKHGFILNQLTTDTV
TVTNFTLDQIREASSIVYEHDDSETKEDSFDVILTDGKYTVEKTIIVMIIPVDDETPRMA
INDGLEIEIGDVKVIDNNVLKATDLDSEDSTLTYVVRYGPGQGLLQRRTPYGTLENITVG
MNFTQYQVDQALIVYIHNGQEGIRDLIKFDVTDGINPLIDRYFYVTVGGIDMVFPDVVSK
GVSLKEGGRVTLTTDLLSTSDLNSPDEHLVFTITRAPQRGHLECTDGPGMPISSFTQLQL
AGSKVYYIHTADDEVKMDSFEFEVTDGYNPVFRTFRVSITDVDNKKPVLTVHGLVVNEGE
NKLITPFELTAEDRDTADRLLKFTVTQVPVHGRLLFNNTRPVTSFTKQDLNENLISYKHD
GTESSKDSFSFIVTDGTHTDFYVFPDTVFETRRPQMMKITVLLVDNGVPQIVVNKGGPTL
RVLETGHLGFLITSKTLKAEDRDSLQLSVTFKITVGPEHGYLINLGTGNATVTTFTQAEI
DDMKICYILRDGGNATSDIFYFSIEDNGGNRLKNQVFRLNWAWVSLEKEYYVVDEEAKYL
EVVLKRRGYLGETSFVSIGTRDGTAEKDKDFRGKAQKQVQFNPGQSTATWRVRILQDGVY
EQSEAFQIVLSEPIMAALEFPDTGTVEILDPADESTVFIPSAVYPVEEDIGELLIPVRRS
GDITQELMVICYTQQATATGTIPTTVLSYSDYISRPEEHNSVLRFDKGEMEKSCRVVIID
DSLYEEEESFNVTLSMPMGGCLGQEYHTARVTIIPDLDDAPGFYFGDTDYRVDESDGYVE
VKVYRTGTDLSKTATVTVRSRKTDPVSAEAGVDYVGISRNLDFAPGVNQQTFRVTILDDL
GQPVLEGTETFELVLRMPMNGILGEPGKATILINDSVSDLPKVQFRDAMHMGHENSGQIS
VVVYRSGDISYRSTVRCYTRQGTAQVMMDFNERPNTDASIITFLPGEVEKPCVLSLVDDT
EHEEEEELRLLLGSPRSESPFGASIGKQNETLVKIMDDADKAIIKFGETKFSVSEPSGAG
QVSMVKIPVLRVGDTSKVSVVRVHTKDGSATSGEDYHPVSEDVEFKEGDTEHYIEVEILY
DGVREMREAFTVHLKPDENMVAETQMNKAIIYIEETISMADVTFPSVPQVFSLLQYDDTS
RARHTPPVAGYPVVCVTACNPKYPDYDKTGSICISEHINDTLTHYRWLVSAPTSLDGVTS
SMREVDFDTFFSSSKIITLDSVYFQAGSRVQCAARAVNSNGDEGLELSSFIVSISIEDGM
CQPRVVGTVGAEPFSAKLRYTGAEDPDHPNLIKITVTMPHIDGMLPVVSTRPMSNFELTL
SPDGTRVGNHRCSNLLDYTEVKTRHGFITNATKNPEVIGETSPYQYSTPLRGSSVLRFYK
NLNLEACLWEFTSYYDMSELLSDCGGTIGTDGQVLNLVQSYVTLRVPLHVSYVFHSPVGA
GGWQHFDLQSELRLTFVYDTAILWRDGIGSPPEAELQGALYPTSMRINEQGRLVVNFRTE
ARFRGLFVISHSASSLSSMVMCADHPGVTFNLSLVRSEPTYNQPMQQWTFTSDFAVRDYS
GTYTVKLLPCTSPPSLEYSLPPVCNPREPVTFDLDIRFQQVSDPVAAEFSLNTHMLLLSK
RTLWLSDGSMGFGQESDTAFSQGDMIYGRVMVDPVQNLGDSFICNIEKVFLCTGADGYVP
KYNPNNNEYGCLADAPSLLYRFKIIDKAQPETQARSFGNVGFRALLAVDDPQALALVRQP
GSDGFSMDSTALFQVSAGREWFIHTIYTVRSRENANRGIGKRSLEYHTLTQHSSLAAGGH
SLTQHSSMDRETQHQTMAAGGPSQSQFRSRRSANRVPDLTEDIGLDNNRGTNILHIALDL
RRQRRTSPDREVLTRGVVPRELNHPEESEDSLVLIIGILVGLLLTILIIIVIVLTVRSRQ
EKKKMEVPTTTSSSTEPMVTSGFTCSGLDSSEV
NT seq
9642 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttaacctgaatagaagagagctgcggagagagagagcatggtacacctcatca
cggatgcgtgtgagacatttatcaacactcattttatactctcataactttagctgcatt
ggtcttagttttttttctggattttatgtgcacaattcgtgtctttgcagtggtttctct
ctccaaatggcttggattatttcccggcggtggaaacgccaagggactggcgctgttttt
ctgctctctgctttgatcgcggtgattgtgacaggtgactccgccgcgcaggttttcgat
agttatggattatcatacgcgttgagatcggaactatcagaagatgctatattggtggcc
aacaatggaatacgcgtgcctttcgggagagcagtattcattgatcctatcaatgatctg
gtaatccaagtacagccgggagacagatgtagtatcacggttctggataacgacccgctc
tcccagaggcccgggcagctctctcccaaaaagtttccctgtgagtttggacccaatgac
gtaaagtattctcacttcgggtccaggagccccccgcgggatagggtgaggctacagctc
agatatgacactcatactgacaccataatcatcccgtttatgatggaagtggaggtgatt
ttcacacagttggaagtgttaaccagaaacatgcctctgactgttgacaaactacttggc
actagtaaccccattgacaggaagattctagagttcacctatgatagaagtgaacatcag
tgtaaaataacatctctctctagtggcagtgcattacccaggtatgggaaacttgtggat
gagggaaaacttggagaaatggtggattgtgatgaatttattaaaatgaatatctgctat
cagcacacttctgcacacaaatcacccaatagagattatttcccaatgattgtggaatta
caagataaagagggtaattttctgaagcaggagtttttccagatgatggtgcgtataaag
gatggagaggagaacacagctcctaaacccagcttcgtggccatgatgatgatggaggtg
gatcagtttgtgatgacagccatcacccctgacatgctggctgccgaggacattgagtct
aaccctgacgaccttatcttcaacatcaccacccccctctccttcgaggaggggtacatt
gtcagcacagatgaccggaacctgcccatcacctctttctaccagggagacctcaaagaa
ctaaagatagcctacaagcctccgtctgtggactctgaaacagaacgtatcttccagata
gagtttgaggtggtggacactgatggggctgtgtctgacccattcgctttcatgattgta
gtgaagcctatgaacacgcttgctccagtagtcaccaggaatactggtcagcttctctat
gagggtcagtccagaccactgtccagttctcataacctaggggtcagtgacgaggacgac
ctggatgatgtcaagatcacggtggtcgacgggcttcggcatggccagttgacggtgctc
gggtcactcaggaagttcttcaccccagccgatctggacgggggcatggtcatataccag
cacgacggcagcgacacgtacagcgacaacatcatcttccggatgacggacgggaagcac
gaggtggagttcctgtttcccctaacgatcgttcccacggacgacgagccgcccattatc
aacgctaacacggggttaatcctcttcaagaaccagattatgctcatttcgccactcaca
ctgagcgctgcagacatcgactctgaagactccactatcaggttcaccatagaagccccg
ttctcgcctataggggaggtgctgctgaggcagtcagaggccccagcagacccatccacc
tggaggtttaatgctgaggatgagctgtatgagaaagaggttacagagtggttgcagcag
gatatcacagatgggaaactgttctacagacacactgggcctcacagcactgacacagtc
atggaccagtttgttttccgggtccaggatgataatgacccccctaaccaatcagaacag
agctcgttcatcatcaagattctgccagtggatgacatctcccctgagctgtatcctggt
accaccctccagatgactgtacacgagtaccagctcacctacttccggaagaagtttctc
cgctacactgacctggactcagaggacagggatctgaagtacactgtcacccagcccccg
acagacacagatgagaacagccctgtggtactggggtctattgtgttaacagagagtcca
gacactgtagtgactgagtttactcaagctcaggtcaatcaccataagatatcatacaac
ccacctgacctggagctggggatcacagcccacgttctgcaggtccagtacacggtggag
gatacgtcagggaacactgtcaccggaacgttctctatattcctgcagcctgtcgacaac
aagccgcctcagataaccaacactggcttcactgtattcgagcggggaacgcacataatc
accagagctgagctggatactgtggacttagacacggacaggagccagatttctttcaca
gtcactcagccccctcagcacggcacggtccagtacaccttcaccaacttgaccaaaggg
gaccagttcaacctgttggacattgctaatgacaggatttcctacatccacaacggagac
gagtccaccagcgatttctttcagctggatgtcagtgacggcgtccatgttgtgaccatc
accatcagggttaccgtgaagcccatcgatgacgagaccccgaccatcaccctcccggcc
ggaaccattggctcctacatcgacgtcctggagaacggggctacggagatcacgactaac
gtcatccaggggcgggacgaggacacggacgacctccgtttgaccttcatcctggaggac
ccaccggttctcggtgagatcctggtgaacggggttcaatcagggagcttcacccaggct
gacatcatcaatggactggtggtatacacccacaccagcggagagatcggcctcaccact
aaatacgactactttaacctgacgctgacagacatgtctgatgagtggacggtagggggc
aacagggtcacgggggtcagggtacagatcaccatcctccccatggacagccaggctcca
gaggtgttcgtaggcccacagttcactgttgtagagggagagaagaatgtgattgagatt
cttcacattagtgctgatgatgttgacactcctaatgatgacctgctttgtaccatcatc
gtacagcccacgtcaggctacgtggagaacatctcccctgccccaggctcagagaagtcc
aggtctgggactgcgatcagtgcattcaccatcaaggacatcagacagaaccacatctac
tatgtccaaagcatccataagggagtggagccggtcgaggacaggttcacgttcagatgc
tcagatggcatcaacttctccgagagacatttcttccccatcgctatcatcccgtccaac
gatgagaagccggagatctatatgagggagtttgtcgttatggaagggatgaatattgtt
atcgatacgcccatcctgaacggagccgacgcggacatcccctcggacgaactcactttc
atcatcaccaaaccacccaagcacggcttcatcctcaaccagctgaccaccgacactgtc
acagtcaccaacttcaccctggaccagatcagggaagcctccagtatagtgtacgaacat
gatgactctgagaccaaggaggacagctttgacgtaatcctgacggacggtaaatataca
gtggagaagaccatcattgttatgatcatccctgtagatgacgagacacccaggatggcc
atcaacgacggtttggaaatagagataggagacgttaaagtgatcgataacaatgtttta
aaagccaccgacctggactctgaggatagtactctgacgtacgttgttcgctacgggccg
ggccaggggttgttacagaggagaaccccttacgggacattagagaacatcacagtgggg
atgaacttcacccagtaccaggtggaccaggctctcatcgtctatatccacaatgggcag
gaaggaatccgggaccttatcaagtttgacgtgacggacggcatcaaccctttgatcgac
aggtacttctatgtgacggtgggcggcatcgacatggtgttccctgacgtggtcagtaag
ggggtctctctgaaagaaggcggtagagtaacgttgaccacagacctgctcagcaccagt
gacctcaacagtccagacgaacacctggtgttcaccatcaccagagccccacagagaggc
catctggagtgtaccgacggccctggcatgcccatctcctcctttacccagctccagcta
gctgggagcaaggtgtactacatccacacggccgatgatgaggtcaagatggacagcttt
gagttcgaggtcaccgacggttacaaccctgtgttccgcacgttccgtgtctccatcacc
gatgtggacaacaagaaaccggttctaacggttcacggcttggtggttaacgagggagag
aacaaactcatcacgcccttcgagctgaccgcagaggaccgcgacacagctgaccgcctc
ctgaagttcacggtcacccaggttcctgtccacggtcgtctcctcttcaacaacacccgc
cccgtcacctccttcaccaaacaggacctgaacgagaacctcatcagctacaaacacgac
ggtactgagtcctccaaggattctttctcctttatcgtgactgacgggacgcacaccgac
ttctacgtgttcccagacaccgtgttcgagacgcggcgcccccagatgatgaagatcacg
gtcctgttggtggataacggggtgccccagatcgtggtgaataaaggggggcccaccctg
agggtgttagagactggtcacctggggttcctcattacctctaagactcttaaggccgag
gacagggatagtcttcagctgtctgtcacctttaagatcaccgtgggaccagagcatgga
tacctcatcaacttgggtacaggcaacgctaccgtcaccacattcactcaagctgaaatt
gatgacatgaaaatttgctacatactaagagatggtggcaatgctacgagtgacatcttc
tatttctccattgaggacaatggaggcaacaggctgaagaaccaggtgttcaggctgaac
tgggcctgggtctccctggagaaggagtactatgtggtggacgaggaggccaagtacctg
gaggtggtcctcaaacgacgaggatacctgggagagacatccttcgtcagcatcggcacc
agagatggtacagcggagaaggataaggacttccgtggtaaagcccagaagcaggtccag
tttaacccaggtcagagcacggctacatggagggtgaggatcctgcaggatggagtgtac
gagcagtctgaggccttccagattgttctgtcagaacctatcatggctgccctggagttc
cctgacacaggcactgtggagatcctcgacccagctgatgagtcgacagtgttcatcccg
tctgcagtctaccctgtagaggaggacattggggagctgctgattccagtacgcaggagt
ggtgacatcacacaagaactcatggtcatctgctacacacagcaagccacagctacaggg
accatccccactacagtcctgtcctactctgattacatatccagacctgaggaacacaac
agtgtcctgcgctttgacaagggcgagatggagaagtcctgtcgtgtggtgatcatagat
gactctctgtatgaagaggaggagagcttcaacgttaccctcagtatgcccatgggaggc
tgtctgggacaggagtaccacactgccagggtcaccatcatacctgacctggatgatgct
ccaggattctacttcggagacacagactaccgtgtggatgagagtgatggctatgtggag
gtcaaggtgtataggacaggcactgacctctctaaaacagccacggtcactgtacgctcc
aggaaaacagaccctgtctctgctgaagccggtgttgactacgtagggatcagtcgtaac
ctggactttgccccgggggtcaaccagcagacgttcagggtgaccatcctggatgacctg
ggtcagccggtgctggaggggaccgagacattcgagctggtcctccgcatgcccatgaac
ggcatcctgggagaaccggggaaggccaccatcctcatcaacgactccgtctccgacctg
cccaaggtgcagttccgtgatgccatgcacatggggcatgagaactccggtcagatctca
gtcgtggtgtatcgtagtggagacatcagttacaggtcaacggtccgctgttacaccaga
cagggcaccgctcaggtcatgatggacttcaacgaacgacccaacacggacgcttccatc
atcaccttcttaccaggggaggtggagaagccgtgtgttctgtctctggttgatgacacg
gagcatgaggaggaggaggagctgaggctgctgttggggtcgccccgcagtgagtctccg
ttcggagcgtccatcgggaaacagaacgagactctggtcaagatcatggatgacgcagac
aaggccatcatcaagtttggggagactaagttcagcgtgagtgagcctagcggggcaggc
caggtgtccatggtgaagatcccagtgctgagggtaggagacacctccaaggtctctgtg
gtccgcgtccacaccaaggacggatcagccacctccggagaggactaccatcctgtatct
gaagacgttgagttcaaggagggtgacacagagcactacatcgaggtggagatcttgtat
gatggagtccgagagatgagagaagccttcacggtccacctgaaacctgatgagaacatg
gtggctgagacgcagatgaataaggccattatctacatagaggagaccatcagcatggcg
gacgtcaccttcccctccgtcccccaggtgttctccctactgcagtatgacgacacctcc
agagccagacacacccccccagtggcaggctaccccgtcgtctgtgtcacggcttgtaac
cctaagtaccctgactacgacaagactggctccatctgcatcagcgagcacatcaatgac
acgctgacccactatcgatggttggtcagcgctccaaccagcctggacggggtcaccagc
tccatgagagaggtggactttgataccttcttctcctcctccaagatcatcaccttggac
tctgtctatttccaggctggctctagggtgcagtgtgcagctcgtgctgtgaactctaac
ggagacgagggcctggaactcagcagcttcatagtctccatcagtatagaggatggtatg
tgccagcctcgtgtggtgggtacagtgggcgctgagcccttctctgccaagctacgctac
accggagcagaggacccagaccaccccaacctcatcaagatcactgtcaccatgccacac
atagacggcatgctccctgtggtctccacccgtcctatgtctaactttgagctgacgttg
agtcctgatggtactcgtgtggggaaccaccgctgttctaacctgctggactacaccgag
gtcaagacccgccacggcttcataaccaacgccaccaagaaccctgaggtgatcggggag
acctctccctaccagtacagcacccccctgaggggatccagcgtactgcgcttctacaag
aatctcaacctagaggcctgtctatgggagttcactagttactatgacatgtctgagcta
ctgtcagactgtggagggaccatcggtacagacggacaggtgttgaacctggtccagtcc
tatgtgaccctccgggtgcccctccacgtctcctatgtgttccactccccggttggggca
gggggctggcagcattttgacctgcaatctgagctacgactcaccttcgtatacgacact
gccatcttgtggcgggacggcatcggcagccctcctgaggctgagctacaaggagccctg
taccccaccagtatgcgtatcaacgaacagggtcgtctggtggtcaacttcagaacagag
gctcgattcagaggactatttgtcatatcacactctgcttcctctctgtcatccatggtg
atgtgtgcggaccaccctggggtgacctttaacctcagcctggtgaggagcgagcccacc
tacaaccagcccatgcagcagtggacctttacatcagacttcgctgtgcgtgactactca
ggtacctacacggtgaagctgctgccctgtacctctcctcccagtctggagtactccctg
cctcctgtctgtaaccccagagaacctgtcaccttcgacctggacatacgcttccagcag
gtgagtgacccggttgcggctgagttcagtctgaacacacacatgttgctgctgtctaag
agaactttgtggctgtctgacggatccatgggcttcggacaggagagcgacacagccttc
tcacagggtgacatgatatatggcagagtgatggtggacccagtccagaacctgggggat
tcctttatctgtaacatagagaaggtgttcctgtgcaccggcgcggatggatacgtgccc
aaatacaaccccaacaacaatgagtacggctgtctggctgatgctccatcgctgctttac
agattcaaaatcattgataaggcccagccagagacccaggccaggtcgtttggtaacgtg
gggttcagggctctgctggctgtagacgaccctcaggccctggccctggtcagacagcct
ggatctgacggcttcagcatggactctacagcactgttccaggtgtcagcagggagagag
tggttcatacacacaatctacaccgtacgctccagagagaatgctaacaggggcatcggg
aagagaagtctggagtaccacacactcacccaacacagcagtttggctgcaggaggccac
tccctgacccaacacagcagcatggacagagaaacccagcatcaaactatggctgcagga
ggaccgtcccagtcccagtttcgctccaggcggtcagcaaacagggtgccagacctgaca
gaggacatcggcctggacaacaaccgaggcaccaacattctccatatcgccctggacctc
agacgccagcgccgcaccagccctgaccgggaggtcctcactcggggtgtggtgcccagg
gagctgaaccatcctgaggagagcgaggacagcctggtcctgatcatagggatcctggtg
ggcctcctcctcaccatcctcatcatcatcgtcatagtgctaaccgtacggtccagacag
gagaagaagaagatggaggttcccacaacaacgtcaagctccactgagcccatggtgaca
tcagggttcacttgcagtggcttggacagctcagaagtctga
DBGET
integrated database retrieval system
