Oncorhynchus mykiss (rainbow trout): 110503349 Help Entry 110503349         CDS       T07259                                  Name (RefSeq) protocadherin-16   KO K16507   protocadherin-16/23 Organism omy  Oncorhynchus mykiss (rainbow trout) Pathway omy04519   Cadherin signaling Brite KEGG Orthology (KO) [BR:omy00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04519 Cadherin signaling     110503349  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:omy04515]     110503349 Cell adhesion molecules [BR:omy04515]  Cadherins   Cadherin related    110503349 SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_FAT4_N Cadherin_CELSR2_9th Ig_CLSTN Ig_Cad99C_N Cadherin_2 Fibulin_C Cadherin_pro LapA_dom CADH_Y-type_LIR TED6 He_PIG Motif Other DBs NCBI-GeneID:  110503349 NCBI-ProteinID:  XP_036816974 LinkDB All DBs Position 24:complement(15252457..15298489) Genome browser AA seq 2714 aa AA seqDB search MFAQHSSTTVTATDADGGSFGSISYSLGSGINSAVPSQFSVGTETGQICTNVDLDRDQGP TSYDFTVTAVDGGGLNSVAYVRVDLLDINDNRPVFYPVSYAVSLSSQSAPGTSVVKVTAL DPDTGENGRVTYRTVPRGNSPFFTLNKDTGVISLSRSLHGKANTVIPMVVSAQDGGGLAA LVNARVNISVVAGLVAPPVFEHSQYSFTVSENVLRGTEVGIVQAISKNGGPSKDILYTIS SGDPAGYFTVDPESGALRTSLPLDHEAQPSLTLELQARSGSPPAFGQTHVHITIQDINDN APVFMPSSSESLLLPEHTEIGTVVYRVQAKDRDSGLNGQMTFDLSSTTTSIGGQRTFSME RSTGEIRLVGGLSYDVTPRYDLTVTAKDGGAPQLSSTMMLVVHVQAENDHGPVFDTLTYR VELRENTPLSTRFLQVRALSLDTTGSGSSSPLAYYLRPDGDAAGFGIAADSGWLFVKSAL DREVKDMYMLMVLATSGHGQLKKTGSATVRVSVTDENDNSPRLTQERAFLAVRENLPVGS GFGRVSAMDRDSGLNGRLSYRLLHPDRSFQINSHTGEISTRVGLDREQQSSYQVLLVVQD GGTPPCSATGTAFITVLDENDNTPSFRHSQPGRGLTMQVMEGQASGLLLGKVQAKDPDEG ENGTVYYSMSGPRAERFSLNPTTGELRSSSPLSHSDRAEYSFTVTATDRGQPSHSATCSL HIQVLSASRAPSKANSFSIYLNSVEEAKPGSVIGSVKSHDSLELPEAGQVTYTVVGGSDR DGTFMVDRQTGDVYLARELDYERSARYTLQIEVDDFSMTLPSSHLVQLDIEVKDSNDHAP YFPEDPVTMVIPENMVPGASIYTFQASDQDGSGPNSLLTYSILHQYPDLPDILTLHPSTG VLTLAQELDHEVTSSLILVVQATDSALNVSQRRWGSVTARVFVTDENDNAPVFSSPSAVS VMEDQPVGFVVLYVVARDADQGENRRVSYFIKTGNAGGTFSLNPNTGSLSILKPIDREEQ VLFNLTIVAQDHGVPALSSSQLLSVQVIDVNDQVPWFQENQYQAQITENQPAGTTVLVVS ASDLDQGTNGQVTYGGISDEGFSIHPATGVITTTKALDREAQEQYTLTVYARDGGVPPNF ARASVRIRMLDENDNAPTFSRLYYSLDVPENMEAVELFTLRATDLDAGDSGEMTYKITAG DPSGDFRVDRKSGVLSTSRPLDRERRARYSLTVTALDGGSPALSSTATVEVTLLDVNDHS PQFTSPSYTADLSEDAPIGSLVLEVSATDLDQGSNSQVLYFLLRGSQGMFIIDQHTGHVI TAAPLDRERTASYTFDVCATDSSPASPRNSTATVNVYVQDVNDNAPFFIQDPLVINISAS SVSSHRVLATMRAEDRDFGANGSVFYRFASPVRGFTINSLTGDIQATEKLQGLTQGQRTL IVEAMDQGSPTQSSLGVVVIYIREQTYKGIRFSRHARDVSLQENAAKGTAVVQTQAQYPD GSRSGISYSIFSGNTLLSFGISSSTGEIWVQSSMGLDYEESPRLRLVVKAETASSSSFMA VNLILQDVNDNLPRFQLQNYVAYIREAQGYHFPIIQVVADDLDQGQNGQVTYSLRSSSLS GLFKIDSLTGSITTAAIMDREIWTQTKLVVTATDRGTPRLAGSATLTVIIVDLNDNSPTI PLPREIRVPENTLVGSVITQVTGNDVDSGPALSYTLHLDPSSQGVFGIHRYGGGVSLTAP LDYEEKTWYTLTVRATDSKHQTEANLTILVEDVNDNAPTFTQDLYQMTLAEHSPAGSAVV TVTATDRDSGENGRVTYRVMSSTRDIFYIDPSNGTLFITQQAEFNSENPSILVVIESRDM GTPALSSIATVQVQVTDVNDNAPVFHQSEYRATVSEDGLPGTTILTLEATDGDASRDNCG FDFTIASGNSGNAFQIESSVRFLEGRGFQTVGSVVLTGEGLDFEAVSSYNLTVVVSDRGV PQRSSAVSALISVTDTNDNPPVFSRAEYSVVLSEGTAAGTEVLSLSATDPDSSAVGKVQY LISSGDETGMLQVDRWTGALRLQRPLENERQASHVIIVQASDGQGHYALAPVTVEVKDIN DNRPYFPLPVLTASIRENQPHNTLVTMLHAIDQDTGVFGQLRYYMLDKTGEGKDAFLVNQ TSGEVRTRFTFDFEKVNLFNFVALAMDAGNFSATVTVQVYVTGEDEYDPVFSDPEFSFLV PEGSKKGQSIGQVTARDEDEGVDGIVLYSLADPSPYFQVNASTGVVFLKMDSHVHHLSRS KREVRVMNLDLKAHSPLETSRVATARLTVDVTHTSFGVASDMNLLLVSVIAVSLGAILIL IFIAMALFCVRLRRQRKEQQSRCRPPASPGHGTMLHKLEETKVTGTDRNDRIYHQALPGY TSDQTGSGVGGPYPRGGSLDPSHSSGRGSAEAAEDDEIRMINEYPRVSSISSSMQEHISA RGPDSGIQQDADQLSDVSCEPNMDANQWFKAKKLASLSGTLLSGQLPVYREDGGGYVGVG RGLNISHPKDYAFPVDGKPAVDGSLTAIVASDEELRGSYNWDYLLDWCPQFQPLASVFTE IARLKDETAPPNPRRPLQHKAKVDPKPPRIDPPPLITSIAHPGAKTVPVKPAPIKPSVGR SSFPHLASLRRSPISHEGSPSSVAMSPSFSPSLSPLAARSPAITPFGVTQGPSASMISTT EHSMEHSEEAEMRI NT seq 8145 nt NT seq  +upstreamnt  +downstreamnt atgtttgcccaacacagcagcaccacagtgacagcgacagatgcggatggtggctccttc ggctccatcagctactctctggggtcaggcatcaacagtgctgtcccctcccagttctct gtagggacggagacaggacagatctgtaccaacgtggatctggacagggatcagggacca accagctatgactttaccgtcaccgccgtggacgggggcggtctgaactctgtggcctac gtcagggtggacctgctggacatcaatgacaacagaccagtcttctaccctgtgagctac gccgtcagccttagctcccagagtgcacctggcacttctgttgtcaaggttacggccctt gaccccgacactggggagaacgggagggtcacgtaccgaaccgtccccaggggcaactcc cccttcttcaccctcaacaaagacacaggtgtgatctccctgtcccggtcgctgcatggc aaggccaacacggtgatccccatggtggtttcagcccaggacggagggggtttggcagca ctggtcaacgcccgggtcaacatcagtgtggtggcaggcctggtggcgccccctgtgttt gaacacagccagtacagcttcactgtatctgaaaacgtactgcgagggactgaggttggc attgtacaggccatcagtaagaacggcggccccagtaaggacatcctgtacaccatctcc tctggagaccctgctggctacttcactgtggacccagagagtggtgccctgcggaccagc cttcctttggaccacgaggcccagccctctctaaccctggagctccaggctcgtagcggc agcccccctgccttcggtcagacccacgtccacatcaccatccaggacatcaacgacaac gctccggtcttcatgccctcctcttctgagtctctcctcctcccggagcacacagagata gggacggtggtctacagagtccaggccaaagaccgggactccggcctcaacggccagatg acctttgatctttcctctaccacgacctcaatcggaggtcaaagaaccttttccatggag cgcagcacaggggagatccggctggttggcgggctgtcatacgacgtaacgccgcgttac gacctgacggtgacagctaaagatggcggcgcgccgcagctaagctctaccatgatgctg gtggtgcatgtccaggcggagaacgaccacggtcccgtgttcgacaccctgacctaccgc gtggagctgagggagaacacgccgctcagcacacgcttcctacaggtgcgagctctgagc ctggacaccacgggttcaggctcctcctctccactggcgtactacctgagacctgacgga gacgcagcagggtttggcattgcagcagacagcggctggctgtttgtgaagagcgctctg gacagagaggtgaaggacatgtacatgttgatggttctggccacgtcgggccacgggcag ctgaagaagacgggcagtgccacggtgagggtgtcggtgaccgatgagaacgacaactca cctcgtttgacacaggagagggctttcctggccgtgagagagaaccttccggtggggtca gggttcggacgggtttcggctatggatcgcgactcagggctcaacggcaggctcagttac agactcctacacccagacagaagcttccagatcaactcacacacaggtgagatcagtacc cgtgtaggtctggacagggagcagcagagtagttaccaggtgttgttggtggtccaggat ggaggtactcccccatgcagcgctacagggacagccttcatcaccgtcctggatgagaac gacaacactccctccttcagacacagccagcctggcagaggactgaccatgcaggtgatg gagggccaggcatcaggtctactgctggggaaagtacaggccaaggaccctgatgaggga gagaacggcactgtgtactactccatgtcaggtcccagagcagagcgtttctctctgaac ccgactacaggtgaactgcgttcctcctctcctctgagtcactctgacagagctgagtac agcttcactgtgaccgccactgaccgaggccagccctctcacagcgctacctgttcacta cacatacaggtcctgagtgcgagcagagctccttccaaagccaactccttctccatatac ttaaactccgtcgaggaggccaaaccgggctctgtgattggctctgtgaagtcacatgac agcttagagctccctgaggctggtcaggtgacctatacggtggtgggcgggtcagaccga gacggaacgttcatggtggaccgtcagacaggtgacgtgtacctggcaagggagctggac tacgagcgatctgcccgctacacactacagatagaggtggacgacttctccatgacatta cccagcagccacctggtgcagctggacatcgaggtgaaggacagcaacgaccacgcaccc tacttcccggaggaccccgttaccatggtgatacctgagaacatggtgcctggggcatcc atctacaccttccaggcctcggaccaggatggatcaggacccaacagcctgctgacctac tccatcctgcaccagtaccctgacctccctgacatcctgacccttcacccttccactggc gtcctgaccctggcgcaggaactggaccatgaggttacttcctccctcatcctggtcgta caggcgacagactccgccctgaacgtcagccagcggcgctggggctccgtgacagcgagg gtgtttgtgacagacgagaacgacaacgctccagtgtttagctcgccttccgcggtcagt gtcatggaggaccagcctgtgggcttcgtggttctctacgttgtggcgcgagatgccgac cagggggagaacagacgggtcagctacttcatcaagactggcaatgctggagggacgttc agcctcaaccctaatactggttctctgtctatcctgaagcccatcgaccgggaggagcag gtcctcttcaacctgaccatcgtagcccaggaccacggggtaccagcgctctcatccagc cagctgctgtctgtccaggtcatcgacgtgaacgaccaggtgccctggttccaggagaac cagtaccaagcccagattacagagaaccagcctgcaggaaccactgttctggtggtgtcg gcctccgacctggaccaaggtaccaacggccaggtgacatatggaggcatctctgatgag ggtttcagcattcacccagctacaggtgttataaccaccactaaagccctggacagagag gcacaggaacaatacacactgacagtgtatgcccgagacggtggcgtgcctcctaacttt gcccgggcgtcagtgaggatccggatgttggatgagaatgacaacgccccaacgttcagt agactgtactacagtctggatgtgcctgagaacatggaggctgttgagctgttcaccctc agagctacggacctggacgctggggacagcggagagatgacctacaagatcacagcaggc gacccatcaggtgacttccgtgtggacaggaagtcaggtgttctctccacctccagaccg ctggacagggaacgtagggccaggtacagtctgacagtgacagcccttgacgggggctct ccggccctgagcagcacggccacagtagaggtcactctcctggacgtcaacgaccacagc ccccagttcaccagccccagctacaccgctgacctctctgaggatgctcctattggctcc ctggtgctggaggtctctgctactgacctggaccaagggtctaacagccaggtgctgtac ttcctgttgcgcggttcccagggcatgttcatcattgaccagcacacgggacatgtcatc accgccgctccgctcgaccgagaacgaaccgcgtcgtacactttcgatgtctgtgccaca gactcgtcccccgccagcccacgcaactccaccgccacggtcaatgtgtatgtacaggat gtgaacgacaacgctccattcttcatccaggaccccctggttatcaacatctctgcctcc agtgtctcctcccaccgcgtcctggccaccatgcgggcggaggaccgtgactttggggcc aacggctcagtgttctaccgcttcgccagccctgtccggggcttcaccattaactctctg accggggacatacaggctacagagaagctgcagggactgacccagggccagaggactctg attgtagaggctatggaccagggcagcccaacccagtcctctctaggggtggtggtcatc tacatcagagaacagacctacaaggggatccgcttctcacgccacgctagagacgtcagt ctgcaggagaacgctgccaaaggtaccgccgtggtgcagactcaggcccagtaccctgat ggatcccgtagtgggatcagttacagcatcttcagtggcaacaccctactctcctttgga atcagctcctccactggtgagatctgggtacagagctccatggggctggattatgaggag tcccctagactccgcctagtggtgaaggctgaaactgcatcctccagttccttcatggcg gtcaacctgatccttcaggacgtcaatgacaacctgccgcgcttccagctgcagaactat gtagcctacatacgagaggcacagggatatcattttcctatcatacaggtggtggctgat gacctagaccagggccagaatggtcaggtgacctacagcctgaggtcgtcgtctctcagc ggcctgttcaagatcgactcgctgaccggaagcatcaccaccgccgctatcatggaccga gagatctggacacaaaccaagctggttgttacggcgacggaccggggcacaccacgattg gccggctcggcgaccctcacggtgatcatcgtggacctcaacgacaacagtcctacaatc cctctgccgcgtgagatcagagtaccagagaacactctggttggctcggtaataacccag gtgacaggaaatgatgtggactcaggccccgccctgtcctacaccctccacctggacccg tcttcccagggcgtatttgggatccaccgctacgggggcggggtgtctctgaccgcccct ctggactacgaggagaagacctggtacacgctgactgtcagggctacggactccaaacac cagactgaagctaacctcaccatactggtggaggatgtcaatgataacgctcctacgttc acacaggatctttaccagatgactctggcagagcactccccagctggcagtgcagttgtc actgtgacagccacggaccgcgactctggggagaacggccgcgtcacctacagagtgatg tcatcaacccgggacatcttctacatcgaccccagcaatggtaccctgtttatcacccag caggcagagtttaactctgaaaacccttctatcctggtggtaatagagtccagagacatg ggaacaccagccctctcctccatcgctactgtacaggtccaggtgactgacgtcaatgac aacgcgcccgtcttccaccaatcagagtacagagccacggtgtcggaggacggccttccg ggcaccaccatcctgaccctagaggcgaccgacggcgacgcgtcgcgcgacaactgcggc ttcgacttcaccatagccagcggaaactcaggcaatgccttccaaatcgagagcagcgta cgcttcctggaaggacggggcttccagacggtaggcagcgtggtattgaccggtgagggg ctggacttcgaggcagtgtctagttacaacctgaccgtggtcgtgtcggaccgtggcgtg ccccagagaagctcggctgtctctgcgctgatcagtgtgacggatactaacgacaaccct ccggtgttcagcagggcagagtacagtgtggtgctgagtgaaggaacagccgcagggact gaagtcctcagcctgtctgcaacagacccagactcctcggcagtagggaaggtgcagtac ctgatcagctctggggatgagacgggaatgctccaggtagaccgctggaccggagccctg aggctgcagagaccactggaaaatgagagacaggcatcccatgtgatcattgtgcaggcg tcagatggacagggtcactatgcgctggctccagtcactgtggaggtgaaggacattaat gacaacagaccttacttccccctgcctgtcctcaccgccagcatcagagagaaccagcct cacaacacccttgtcaccatgctgcacgccatcgaccaggacacgggagtcttcggacag ctgagatactacatgttggacaagactggagaggggaaagacgccttcctggtcaaccag acgtcaggcgaggtccggactcgcttcaccttcgactttgagaaagtcaacttgttcaac tttgtagctctggccatggacgcagggaacttctctgccacggtgaccgtccaggtgtac gtgacaggggaggatgagtacgaccctgtgttctccgacccagagttctccttcttagtt cctgaggggtcgaagaagggccagagcattggtcaggtgacagccagagacgaggacgag ggagtggatgggattgttctgtactccctagctgacccctcgccctacttccaggtcaat gcatcgacgggcgtggttttcctgaagatggacagccacgtccatcatctgagcaggtcc aagagggaggtccgtgtgatgaaccttgacctgaaggcccacagccctctggagacatcc cgtgtggccaccgctcgcctcaccgttgacgtaacacacacctcctttggcgtggcatcg gacatgaacctgctgctggtcagtgtgattgctgtgtccctgggagccatcctcatcctc atcttcatcgccatggctctgttctgtgtgagactgagacgtcagaggaaggagcagcag agtcgctgcagacctccagcctctcccggccacggcacgatgctgcacaaactagaggag actaaagtcactggtaccgaccggaacgaccgcatctaccaccaggccttaccagggtac acttccgaccaaactgggagtggtgtgggagggccatacccccgcgggggctccctggac ccatcccactccagcgggcgtggctcggcggaggcggcggaagacgatgagatccggatg atcaacgagtacccccgtgtctcctccatctcttcgtccatgcaggaacacatctcagcc cgcgggccagactctggtatccagcaggacgctgaccagctgtctgacgtctcctgtgag cccaacatggacgcaaaccagtggttcaaggccaagaagctggccagtctcagtgggact ctgctgtctggccagttgcctgtctacagggaggatggaggaggttatgtgggggtaggg agggggctgaacatctcccaccctaaagactatgccttcccagtggatggtaaacccgct gtggacggctccctcacagccatagtggccagtgacgaggagctgaggggtagttataac tgggactacctgctggactggtgcccacagttccagccattagcaagcgtcttcacggag atagcgaggttaaaggatgagacggcccctcctaaccctcgcagaccgctccagcacaaa gccaaggtggaccccaaaccccctcgcattgaccccccgcccctaatcacctccatagcc caccccggggcgaagacagtcccggtcaagcctgcccccattaaaccctctgtggggagg tcctccttccctcatctggcctccctacggaggtcccccatcagtcacgagggctccccc tcctcagtagccatgtcccccagcttctccccctccctatcccccctggccgcccgctcc ccggccatcacacctttcggcgtcacccagggcccctcagcctccatgatcagcaccact gaacacagcatggagcacagtgaagaggccgagatgaggatatag

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