Oncorhynchus mykiss (rainbow trout): 110503469
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Entry
110503469 CDS
T07259
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110503469
Ion channels [BR:
omy04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110503469
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Motif
Other DBs
NCBI-GeneID:
110503469
NCBI-ProteinID:
XP_036817775
Ensembl:
ENSOMYG00000036154
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All DBs
Position
24:32030408..32036955
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AA seq
816 aa
AA seq
DB search
MDNITPDQWQAIVNKKLNFPPELIAAIQEDNAILVGSLLSTGDGIIRQLDESEDRLWREA
LNLSIRMGNEDTFSALMLGVKFDFRQIYEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSMAIFDHSIDDSQFAPGVTPLTLACQKDLYDIVTMLTKKGHAIPLPHSISCTCLECR
NGRQYDLLKFSLSRINTYRGMASRAYLSITTEDAMLSAFRLSRELRKLSKKEPEFKPQYL
ALEELCQEFAVEMLAMCRNQSEVTTVLNICDDDNEDELDEQTFEEGIPTLSRLRLAVNYN
QKLFVSHPICQQVLSSIWCGNIPGWRGSKTVWKLTVSLGIFFTMPLLCMIYWVAPKSKIG
KTLKIPVIKFLLHSASYLWFIIALLAESIFMELYRDEFASRQQNILYNSLHMIWVVGFFW
SECKNVWAEGLRGYIVDWSNILDMIVLSMYLASFSLRVLIMAIGHFVCQDQNLVEKCAYF
TQTVRDEWWQEDPQLISEILFAVTSMLSFTRLAYILPAHESLGTLQISIGIMIDDMMRFM
FLLMIIGTAFLCGLNNIYVPYAASPHLGRFNETFSFLFWTMFGASNQGYVDMPDFVLAQF
VGRVLYGVFTLVIVIILLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGSTIPV
PFNLVPSPKALFYLLRGFFCCCNRKKIPDYPPIASMSNSTMNNSGEAGMDRVSYRLQVVK
ALVQRYIEAARREFGEATRKDVGNRITELNKGVGRLHSDMKTFYQNLQNSKSFGSKGDGG
NFLGKYIKGAKNNFKNFDKNEAMGNSPDVYESICTS
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggacaatattacgccagaccaatggcaggcgattgtgaacaaaaagcttaatttcccc
ccggagctgatagcagccattcaggaagacaacgcaattctggtgggcagcctgctgtcc
acaggggacggcatcatccgccagctggatgagtctgaggaccgtctgtggagagaagcc
ctgaacctgtccatccgcatgggcaatgaggacactttctccgctctgatgctgggcgtc
aagtttgacttcaggcagatctacgaggcgctgctggtggcggtggacaccaaccagccc
cgggtggtcaagaggctcctggaccgcctggaccaggaaaagggcaacaagatggatgtg
cgctcattctccatggccatatttgaccactccattgatgactcccagtttgcacccgga
gtgaccccgctgaccctggcctgtcagaaggacctgtatgacattgtcaccatgttgact
aagaagggtcatgccatccctctgcctcactctatctcctgtacctgtctggagtgccgg
aacggccgtcagtatgacctgctgaagttctctctgtctcgtatcaacacctaccggggc
atggccagccgggcatacctctccatcactacagaggatgccatgctcagtgccttcaga
ctcagccgggagctacgcaagctctccaagaaagaacctgaatttaagccccagtacctg
gccctggaagagctgtgtcaggagttcgcagtggagatgctggccatgtgtcgcaaccag
agtgaggtcacaacggtcctgaacatctgtgatgacgataatgaagatgaactggacgag
cagacctttgaggaggggattccaaccctgtcacgcctacgccttgcagtcaattacaat
caaaaactgtttgtgagtcatcccatctgccagcaagtgctgtcgtccatttggtgtgga
aacatcccagggtggcggggcagcaagacggtctggaagctcacggtgtctcttgggatc
ttcttcaccatgcctctcctctgtatgatctactgggtcgctcccaagtccaagattgga
aagactttgaagatacctgtgatcaaattcctgctgcactctgcctcctacctgtggttc
atcatcgcccttctagctgagtctattttcatggagctgtaccgcgatgagttcgcatcc
cggcagcaaaacatcctctacaactccctccatatgatctgggtggtcggtttcttctgg
agtgagtgtaagaatgtgtgggcggagggtctgaggggttacatcgtggactggtccaac
attctggacatgatagtactcagcatgtacttggcttccttcagtctgagagtcctcatc
atggcaattggtcattttgtttgccaagaccaaaacttggttgagaagtgtgcctacttc
acccaaacagtgcgggatgaatggtggcaggaggaccctcagctgatctcagagattctg
ttcgctgtgaccagcatgctcagcttcacccgactggcctacatcctgcctgcccatgag
tctctgggtactctacagatctccattggtataatgatagatgacatgatgaggttcatg
tttctcttgatgatcattggaacagcttttctctgtggactgaataatatctacgtgccc
tacgcagcttctccacatcttggacgcttcaatgaaaccttcagctttctcttctggacc
atgtttggtgcatctaatcaaggctatgtggacatgccagattttgtcctggctcagttt
gtgggcagggtcctgtatggggtcttcactctcgtcattgtcattatcctgctcaatatg
cttatcgccatgatcactaattcattccagaagatagaggatgatgctgatgttgaatgg
aagtttgctcgttcaaagctctacttgagttacttcagagagggctccactatacctgta
cccttcaacctcgtcccctctccaaaggccttgttctacttactgaggggctttttctgt
tgctgcaaccgaaagaaaattccagactatcctcctattgcctctatgtccaacagtaca
atgaacaacagtggagaggcagggatggaccgagtgtcatatcgcctgcaggtggtcaag
gcgctggtacagcgctacatagaagcagcccgcagggagtttggagaggcgacacgtaaa
gatgtggggaacaggatcacagagctgaacaagggggtggggagacttcactctgatatg
aagacgttctatcagaacctgcagaacagcaagtccttcggctcaaagggcgatggaggc
aacttcctgggcaagtacataaaaggagcaaagaacaactttaagaactttgataaaaat
gaggcaatggggaatagcccagacgtgtacgagtcaatctgcacctcgtag
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