Oncorhynchus mykiss (rainbow trout): 110503487
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Entry
110503487 CDS
T07259
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110503487
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
Other
110503487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Ig_5
Pur_ac_phosph_N
C1-set
V-set_CD47
Ig_6
Interfer-bind
fn3_2
DUF1461
Motif
Other DBs
NCBI-GeneID:
110503487
NCBI-ProteinID:
XP_036817190
LinkDB
All DBs
Position
24:complement(4341853..4637877)
Genome browser
AA seq
2141 aa
AA seq
DB search
MTVPVMGGYGRRDQISVRSSEFASLGLGLERSPVSIVTTPARSLAWPNAAPCTRRDCTTF
LRNIPAIYGMWLVTLFLLYSLQEVNSEDVVSTRLYFVNASLQRVTFSSSVGVSLPCPAGG
APHAVLRWYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSYIHDNEYFCTAENQAGK
IRSPSIHVKAVFREPYTVRVADQRSMRGNVAVFKCLIPTAVQEYVSVVSWEKDTVSMVPG
NRFFLTSFGALYISEVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPTESTPSVLDS
FQSGEVQVGRNVELPCIASGYPNPTIRWLKDGRPLPADSRWTRRLTGLTVSDLRLDDSGN
YICEVTNSFGSKEVTGHLNVIEPLRVTLSPKNLKTGISSTVILSCAVQGSPHFTLSWYRN
TEPVLPDQHFSIQGAHNETLFISAAQKRHSGAYQCFATRKGQTAQDFSIILLEDGTPRIV
SSFSERVVVPGEPFSLMCAAKGAPPPTITWTLDDEAVARDPSRVRASQYTLSDGSTVSHV
NVSSPEIRDGGVYRCAARNSAGSAEYQARINVRGSPRIRDMRNITAVAGRNTFINCRVIG
YPYYSIKWYKEGLLLPDNHRQVVYENGTLKLSDVQKVLDEGAYLCSVLIQPQIFISQTVY
VQVKVPPLIQPFDFPPTSIGKLMYIACVVSSGDMPIHITWRKDGQEVAPSSGVNIETKEY
MSSLQIGKVSLKHNGNYTCIASNDAATVSSERQLTVTVPPQFVVQPNNQDGIYGKAGVLN
CSVDGYPPPKVMWKHAKGIGNPQQYHPVPLTGRIQIMGNGSLLIRHVLEEDRGYYLCQAS
NGVGSDISKSMVLTVKIPAMITSHPNTTMAIKGQIKELNCTARGEWPIIIRWERGDTVID
PDRNPRYAITTSPNEKSDEVLSTLKLKPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPP
DPPELEVREVKDRSMNLRWTQRFDGNSIITSYDIEYKNKTDPWELKHATRKISPTNNQAN
IVDLHPAQIYSIRMFSYNKIGHSQASKELTISTEEAQPDGPPVEVFLLPMTSQSIRVTWK
APRKELQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQA
FNRAGTGPSSSEINATTLEDVPSQPPQNVRAISVTSDEAVITWAEPPRLTLHGVLKGYRV
VFWSLFPDGEWGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQTRE
DHPGPPAGIKAVPSSTSSVVVSWLPPHKPNGIIRKYTIYCSSPGSGQPAPSEYEANPELL
FYRVTHLNRGQQYLIWAAAVTTAGRGNISDKVTVEPAGKAPAKILSFGGTVTTPWMKEVR
LSCSSVGEPTPTIKWTKDSEDTAIPVTLDGQRLIMANGTLVLRSVKAEDSGYYTCTATNT
LGFDTIIVNLLVQVPPDQPRLTVSTTSSTSITLAWIPGDNGGSSIRGFVLQYSVDNIEGW
RDVFISSSERSFKLDNLRCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPQFNKDHPVF
THVNSTHARLNLQGWASGGCPITAVLLEFRPKGNWAWQNVRTNATADVFLAELREATWYE
LKMKACNSAGCGNQSSQFATLDYDGTGTIPPIKSARPEGDDVKKLFSIGCPVILVTLVVA
LLFIIRKKRKEKRLKRLRDAKSLAEMLISSKNNRSFDTPVKGPPQGPRLHIDIPRVQLLI
EDKEGIKQIGEDKATIPVTDTEFSQNVNPQSFCTGVSVHHPALIQNTGPLIDMSDIRPGT
NPVSRKSVKSTHSTRNRYSSQWTLTKCQSSTPARTVTSDWRTVGSQHGITVTESDSYSAS
LSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFEITECFISDSSSDQMTT
GTNDNADSMTSMSTPSETGLCRFTASPPKPQEYDRGRPTNVAVPIPHRANKSEWTGKSDY
CNLPLYMKTDPFFRKQSELRDPCPVVPPREASIRSLAQRAYHTQGRHMTLDSSKQQQALT
VGHTGLAGLSASGGASGGGGGVGGATGGPSGGSSTSSLPQRTLTMPGSSSSSAQSAAAAT
DAVAGGDSRDPLLESSSSGPGRLERQKQAAGGAYSKSYTLV
NT seq
6426 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcccggttatgggagggtacgggaggcgggaccagatcagtgtccgttcctcg
gagtttgcgagtctgggactagggctggagagatcgccggtgagcatcgtcaccactcca
gcacggagcctcgcttggccgaacgctgcgccgtgcactcgtcgggattgcacaacattc
ctgagaaatatacctgctatttatggcatgtggctggtaactttattcctgctgtactct
ttacaagaagtgaacagtgaggatgtggtctcgacgcggctgtactttgtaaacgcctcc
ctgcagcgggtgaccttctccagctcggtcggggtgtccctgccctgccccgcgggcggc
gcaccccatgccgtcctgcgctggtacctggccaccggcgacgacatctacgacgtgccc
cacatccgccacgtgcacgccaacggcaccctccagctctaccctttctcgccatccgcc
ttcaacagctacatccatgacaacgaatacttctgcaccgcagagaaccaggccggcaag
atccgcagccccagcatccacgtcaaagcagtgttcagggagccctatacagtgcgggtg
gcagaccagcggtccatgcggggcaacgtggccgtgttcaagtgcctcattcccaccgca
gtgcaggagtacgtcagcgtggtgtcctgggagaaagacaccgtgtccatggtgccaggg
aaccgtttcttcctgacgtcgttcggggccctgtacatatcagaggtccagaaggaagat
gccctgtccacctaccgctgcatcaccaagcacaaatacagtggagagactcgccagagc
aatggagccaggctgtctgttatggaccctacggagtccaccccctcagtgttggacagt
ttccagtccggcgaggtccaagtgggacgtaatgtggagctgccctgcatcgcctcgggc
taccccaaccccaccatccgctggctgaaggacgggcgcccgctgcccgctgactcccgc
tggacgcgccgcctcacgggcctgacggtcagcgacctgcgtctggacgacagcggcaac
tacatctgcgaggtcaccaacagcttcggctccaaagaggtgaccggtcacctcaacgtc
atcgagccgttgagagtgactctgtctcccaaaaacctgaagacgggcatcagcagcacg
gtgatcctgtcgtgtgctgtgcagggttctccccacttcaccctgtcctggtaccgcaac
acagaacccgtcctccccgaccagcacttctccatccagggggcccacaacgagaccctg
ttcatctccgctgcccagaagagacattcgggagcctaccagtgcttcgccacccgcaag
ggccagaccgcacaggacttctccatcatactgctggaggatggtacgccccgtatcgtg
tcctccttcagtgagcgtgtggtggtcccgggggaacccttctccctcatgtgcgctgcc
aaaggtgcccctccccccaccatcacctggactctggatgacgaggctgtggccagggac
ccgtcccgggtgagggccagccagtacacgctgtcggacggctccaccgtgtcccacgtc
aacgtcagcagcccggagatccgcgacggaggggtgtatcgctgcgccgcacgcaactcg
gccggtagcgccgagtaccaagcgcgcataaacgtaagagggtctcccaggatcagggat
atgcgtaacatcacggcggtggctgggaggaacacctttataaactgccgcgtgattggc
tatccctactactcaatcaagtggtacaaggagggacttctgctgcccgacaaccatcgt
caggtggtgtatgagaacggtactctgaagctaagtgacgttcagaaggtcttggacgag
ggggcgtacctctgcagcgtgctcatccaaccacagatcttcatcagccagaccgtctac
gtccaggtcaaagtgccccctctgatccaaccctttgacttcccccccacctccattggg
aagctcatgtacatcgcctgcgtggtgtcatctggcgacatgcccatccacatcacctgg
cgtaaggacggccaggaggtcgcgccctcgtccggcgtcaacatcgagaccaaggagtac
atgagctcgctgcagatcggcaaggtgtcgctcaagcacaacggcaactacacctgcatc
gctagcaacgacgccgccaccgtcagctctgagaggcagctcactgtcacagtgcctcct
cagtttgtggtccagcccaataaccaggacgggatctacggcaaggcgggggtcctcaac
tgctccgtggacggatacccgcctcccaaagtcatgtggaagcacgccaaaggtataggg
aacccccagcagtaccacccagtgcctctgaccggtcggatccagatcatggggaacggc
tccctgctgattcgtcacgtcctggaggaggaccggggctactacctctgtcaggcctcc
aacggcgtgggctccgacatcagcaagagcatggtcctgacggtcaagatcccggcaatg
atcacgtcgcaccccaacaccaccatggccattaagggccagattaaggagctgaactgc
acagcgaggggggaatggcctatcatcatccgttgggagcgcggtgacacggtcatcgac
cccgaccgtaaccctcgctacgccatcaccaccagccccaacgagaagagtgacgaagta
ttgtctacgctgaagctgaagccagcagagcgtggtgactcggtcttcttctcctgccat
gccatcaactcatatggagagggccggggcctcatccagctcactgtgcaagagccccca
gaccctccagagttggaggtgagggaggtgaaggatcggagtatgaacctgcgctggacc
cagagatttgacggcaacagcatcatcaccagctacgacattgagtacaagaacaagaca
gatccatgggagttgaagcatgccacccgtaagatctctcccaccaataaccaggccaac
atcgtggatctacaccctgcccaaatctacagcatccgcatgttctcctacaacaagatc
ggacacagtcaagccagcaaggagctcaccatcagcacagaggaagcacagccggatggt
cctcctgtggaggttttcctcctgcctatgacctcgcagagcatccgcgtcacctggaag
gcccccagaaaggagcttcagaacggggtgatccggggctaccaaatcggttaccgtgag
aacgggccgggcagtaacggccagtacagcattgtggagatgaaggccacgggggacagc
gaggtgtacaccctggacaacctgaagaagtttgcccagtatggggtggtggtccaggcc
ttcaacagggccggcaccggcccctccagctctgagatcaacgctaccacactggaagat
gtgcccagccagccgccccagaacgtgcgggccatctcggtgacatcagacgaggcggta
atcacgtgggcagagcccccgcgtctgacgctgcacggcgtgctgaagggctaccgggtg
gtcttctggtccctcttccccgacggagagtggggagagatgcagaacatcacgacaacc
cgggagcaggtggagctgagagggctggagaagttcactaactacagtgtgcaggtgctg
gcctacacccaggctggggacggggtcaggagcaatgtcctgtacatccagacccgtgag
gaccaccctggccccccggctggcatcaaagctgtgccctcttccaccagcagtgtggtg
gtttcctggctacccccgcacaagcccaatggaatcatccgcaagtacaccatctactgc
tccagccccggatcaggccaaccggcccccagtgagtacgaggccaaccccgagctgctg
ttctaccgggtcacccacctgaaccgcggacagcagtacctcatctgggccgctgccgtc
accaccgccggacgggggaacatcagcgacaaggtcactgtggagcctgctgggaaggca
ccagctaagatcctatcgttcggaggtacggtgaccactccctggatgaaggaggtgagg
ctatcctgcagctcagtgggcgaacccacccccaccatcaaatggaccaaagacagtgag
gacacagccatcccggtaactctggacggtcagaggctcatcatggccaatggcacactg
gtcctgcgctcggtgaaagctgaggattctgggtactacacgtgcacggccaccaacacg
ctgggctttgacaccatcattgtcaacctgctggtgcaagttcctccggaccagccccgt
ctgactgtctccaccacctcctccacctctatcaccctggcctggatccccggggacaac
ggaggatcctccatcagaggtttcgtgctgcagtactcggtggacaacatagaggggtgg
agggatgtgttcatcagttccagtgagaggtccttcaagctggacaacctgcgctgtggc
acctggtacaaggtcaaactggccgccaagaacagcgtgggagccggacgcatcagtgaa
atcatcgaggctaagacccacggacgagagccccagttcaataaggaccatccggtgttc
acccacgtcaactctacccacgcccggctcaacctgcagggctgggcgagcggtggctgc
cccatcacggccgtactgctggagttcagacctaaggggaactgggcgtggcagaacgtg
cgcaccaacgccaccgccgacgtgttcttggctgagctccgcgaggccacctggtacgag
ctgaagatgaaggcgtgtaacagcgccggctgcgggaaccagagctctcagttcgccacg
ctggactacgacggcacaggtaccatccctcccatcaagtcagcgcggcccgaaggcgac
gacgttaagaagctcttctccattggctgccccgtcatcctggtcactctggtcgtcgcc
ctgctcttcatcatccgcaagaaacgcaaagagaagagactgaagagactgagagatgcc
aaaagcctggctgagatgctgatcagcagtaagaataaccggagctttgacacccctgtg
aaggggcccccccagggcccccgactccacatcgacatccccagagtccagctgctcatc
gaggacaaggaaggcatcaagcagatcggtgaagacaaagccaccatcccagtgacggac
acagagttcagccagaacgtgaatccccagagcttctgtacgggcgtgtctgtgcatcac
cccgccctcatccagaacaccggccctctgattgacatgtccgacatcagaccagggaca
aacccggtgtcgaggaagagcgtgaagtcgacccacagtacgaggaaccgctactccagc
cagtggaccctgaccaagtgccagtcgtccacgcccgcccgtaccgtcacctccgactgg
cgcaccgtgggctcccagcatggcatcaccgtcaccgagagcgacagctacagcgccagc
ctctcacaggacactgataaagggcgtaacagcatggtgtccacagagagcgcgtcctcc
acctatgaggagctggcgcgggcctatgaacacgccaagcttgaagagcacctgcagcac
gccaagtttgagatcactgagtgcttcatctccgacagttcctcagaccagatgaccacg
ggcaccaacgacaacgccgacagcatgacctccatgagcacgccgtccgagacgggcctg
tgtcgcttcaccgcctcgccacccaaaccccaggaatacgaccgcggaagacctaccaac
gttgccgtgcccatcccccaccgcgccaacaagagcgagtggactggcaaaagtgactac
tgtaaccttcccctctacatgaagacagaccctttcttccggaagcagtcggagctgcgt
gacccgtgcccggtggtgccgccccgcgaggcctccatccgcagcctggcccagcgggcg
taccacacccagggccgtcacatgactctggactcctccaagcagcagcaggctctgact
gtgggccacactggcctggccggcctcagcgcctcagggggagcatcagggggtggtggt
ggtgtaggaggggcgactggagggccgtctggtggttccagcacctcttccctgccccag
aggactctcaccatgcccggctcctcctcttcctctgcgcagagcgctgcagccgctacc
gacgcagtcgcgggaggagactctagagaccctctgctggagagcagctcgtcaggccca
ggcagactagagagacagaagcaggcggctggcggggcctactccaaatcctatacactg
gtgtag
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