KEGG   Oncorhynchus mykiss (rainbow trout): 110503545
Entry
110503545         CDS       T07259                                 
Name
(RefSeq) ubiquitin conjugation factor E4 A
  KO
K10596  ubiquitin conjugation factor E4 A [EC:2.3.2.27]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110503545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omy04121]
    110503545
Enzymes [BR:omy01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110503545
Ubiquitin system [BR:omy04121]
 Ubiquitin ligases (E3)
  U-box type E3
   110503545
SSDB
Motif
Pfam: Ufd2P_core U-box
Other DBs
NCBI-GeneID: 110503545
NCBI-ProteinID: XP_021437598
Ensembl: ENSOMYG00000040782
UniProt: A0A8C7WBI1
LinkDB
Position
24:complement(2500728..2529615)
AA seq 1073 aa
MTDQGNNNQHISRNPFAALFSSLADAKQFASGQKPHSHHGEPPSEDSEGSQSESENSDSI
EDNDDSVAEISRSFLSRQELCEQLNINHMIQRIFLITLDNSDPSLRGGNGIPPRCVFLEE
MAAEIDGQDWLDMDNIEQALFNRLLMLEPGNHLIYMTSCNAVNLSADRDAGDKCAIPFLY
ACYQRAKEEVTKVPEKLLSYAVRCKNLTVSNTRTVLLTPEIYISQNVYEQLLDLLLEGVG
GAQLEEVVEFVEEVIAGLLADQEVRTFSEVIGPVLDIFQGRVKDLDLCQLLLFSYLDLLL
YFSRQKDIATVLVEHIQPKDPNNGLQYQKTLLGTVLNISCLLKTPGVVEGHGFFLNPSRS
SPQEMKVQESNIHQFMDQFHDKLHQLLKNLLQQSGETRHLLLSWLGGCLQANAGRAKIWA
NQMPEIFFQMYASDAFFLNLGAALLKLCQPFCRPRSPKLLTFNPTYCALKELSEEERRNR
NVHARGLDKETCLVPLPPQQSVEYAQSYSLLTENLILTQMTLHLGFHRLHEQMVKMNQSL
HRLQGTWREAQLTGGPAAEQLREQFERLMTVYLSTKAAATQPGMLQCCLNLQASSATLLV
QLGLSNQGPEHAQLSFPLPPLHNSLLCHMPEFFAENLGDFFVFLRRFADEVLESSAESLE
QVLNFITVFMGNVERMKNPHLRAKLAEVLEAVMPHMEPASAGSAQPVMFQRQRVFCSYRH
APHLAEALIAVFVDIEFTGDPHQFEQKFNYRRPMYPILKYMWGKESYRESIKSLAVYASE
NLEAMNPPLFLRYLNLLMNDAIFLLDEAIQYLSKIKLLQLEKDHGEWEGLAPDALREKES
SLQMLGQLARFHNIMSNETIGTLAFLTSEIKGIFVHPFMAERIISMLNHFLQHLVGPKMG
ALKVKDFSEFDFKPQQLVSDICNIYLNLGDEENFCATVPKDGRSYSPTLFSQTVRVLKKI
NKPGEVIVGFGLLADKIKSHADRQLQDEETYADAPDEFLDPIMSTLMLDPVLLPSSNVTV
DRSTIARHLLSDQTDPFNRSPLTMDQIRPNEELKQQILQWLAQQERLQMGPSG
NT seq 3222 nt   +upstreamnt  +downstreamnt
atgactgaccagggcaacaacaaccaacacatctcccgcaacccattcgctgcccttttc
agctccctcgccgacgccaagcagtttgcatcgggccagaaaccacattcgcaccatggt
gaaccaccctcggaggactctgaggggagtcagtcggagtcggagaactcggacagcatc
gaggacaatgacgactcggtggccgaaatcagccgctccttcctgtcgcggcaggaactg
tgcgaacagctcaacatcaaccacatgatccagaggatcttcctcatcaccttggacaac
agtgaccccagtctgagaggaggcaatgggattccgccacgctgtgtgttcctggaggag
atggccgctgagattgatgggcaagactggctggacatggacaacatcgagcaggcactc
ttcaacagattactgatgctggagccagggaaccacctcatctacatgacctcgtgtaat
gctgtgaatctctctgctgaccgagacgctggggacaagtgcgccataccgttcctctac
gcctgctaccagagagccaaggaagaggtcaccaaagtaccggagaagctgctgtcgtat
gcggtgcgctgtaagaacctgacggtgtccaacacgcgcacagtcctgctcacccccgag
atctacatcagccagaacgtgtatgagcagctactggatttgctgctggagggagtcggc
ggagcccagctggaggaggtggtggagttcgtggaggaggtgatcgctggcctgttggct
gaccaggaggtgcgcaccttcagcgaggtgatcgggcctgtgctcgatatcttccaaggc
cgtgtgaaagatttggatctctgccagctgctactcttctcctacttggacctgctcctc
tacttcagccggcaaaaagatatcgctacggtattggtggagcacatccaacccaaagat
cccaacaatgggcttcagtatcagaagaccctccttggcactgtgttgaatatctcttgc
ctgctgaagaccccgggggtggtggagggtcacggattcttcctaaacccgtcacgctcc
agtccacaggaaatgaaggtccaggaatccaacatacaccagttcatggaccagtttcat
gacaagctgcaccagctcctgaagaacctgctgcagcagtcaggtgagacgcgccatctg
ctgctctcctggctgggcggctgcctgcaggccaatgccgggcgcgccaagatctgggcc
aaccagatgcccgagatcttcttccagatgtacgcctcagatgccttcttcctcaacctg
ggcgccgcgctgctcaagctgtgccagcccttttgccggccgcgctcgcccaagctgctc
accttcaaccccacctactgcgccctcaaggagctcagcgaggaggagcggcgcaaccgc
aacgtgcatgccagaggtctggacaaagagacgtgtctcgtcccccttcccccccagcag
tcggtggagtacgcccagtcatacagcctcctcactgagaacctcattctcacccagatg
accctgcacctaggcttccacagactccacgagcagatggtgaagatgaaccagtcgctc
caccggctgcagggtacatggcgggaggcccagctcacgggcggaccggcggccgagcag
ctccgcgagcagttcgagcgcctcatgacggtctacctgtcgaccaaggcagcagccacc
cagccgggcatgctgcagtgctgcctcaacctgcaggcgtccagcgccacactcctggtt
caactgggccttagcaaccaggggcccgagcacgcccagctctccttccccctgccgccg
ctacacaacagcctgctctgtcacatgccagagttctttgcggagaacttgggagatttc
tttgtcttcctccgccgcttcgccgacgaggtcctggagtcttctgctgagagcttggag
caggtcctcaacttcatcactgtgttcatgggaaacgtggagaggatgaagaaccctcat
ttgcgggcaaagctggcagaggtgctggaggcggtgatgccccacatggagccggcatcg
gccggctcggcccagccagtcatgttccagcgtcaaagggtcttctgctcctaccgccac
gcccctcacctggccgaggcgctcatcgctgtgtttgtggacattgagttcactggtgat
cctcaccagtttgaacagaagttcaactacaggagacctatgtatcccatcctcaagtac
atgtgggggaaggagagctacagagagagcattaagagtcttgctgtttatgcttccgag
aacctcgaagccatgaatcctccactcttcctgcggtatctgaatctcctgatgaacgac
gccatcttcctactcgacgaagctatacagtacctgagcaagatcaagctactacagctg
gagaaggaccatggcgagtgggagggcctggctcctgatgccctcagagagaaggagtcc
agtctgcagatgttgggacagctggcacgcttccataacatcatgtccaacgagaccatc
ggcacactggctttcctcacatcagagatcaagggtatttttgttcaccctttcatggcc
gagaggatcatctccatgctcaaccacttcctgcagcacctggtcggacccaagatgggt
gccctgaaggtgaaagacttcagcgagtttgacttcaagccccaacaactagtttccgat
atctgcaacatctaccttaacctgggtgatgaagagaatttctgtgccactgtcccaaaa
gacgggcgctcctactctcccacgctcttctctcagactgtccgagtcctgaagaagatc
aacaagcccggagaagttattgtgggtttcgggctccttgctgacaaaataaagtctcat
gcagaccgacagctgcaggatgaggaaacatacgcggacgccccggacgagttcctggac
cccattatgtccacgctgatgctcgaccctgtgctgctcccctcttccaatgtcacggtc
gatcgctcgactatagcacggcacttactcagtgatcagacagacccattcaaccgcagc
ccactcacaatggaccagatccggcccaacgaggagctgaagcaacagatcttacagtgg
ctggcccagcaggagcggctacagatgggccctagtggctag

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