Oncorhynchus mykiss (rainbow trout): 110503545
Help
Entry
110503545 CDS
T07259
Name
(RefSeq) ubiquitin conjugation factor E4 A
KO
K10596
ubiquitin conjugation factor E4 A [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110503545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110503545
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110503545
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
U-box type E3
110503545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
110503545
NCBI-ProteinID:
XP_021437598
Ensembl:
ENSOMYG00000040782
UniProt:
A0A8C7WBI1
LinkDB
All DBs
Position
24:complement(2500728..2529615)
Genome browser
AA seq
1073 aa
AA seq
DB search
MTDQGNNNQHISRNPFAALFSSLADAKQFASGQKPHSHHGEPPSEDSEGSQSESENSDSI
EDNDDSVAEISRSFLSRQELCEQLNINHMIQRIFLITLDNSDPSLRGGNGIPPRCVFLEE
MAAEIDGQDWLDMDNIEQALFNRLLMLEPGNHLIYMTSCNAVNLSADRDAGDKCAIPFLY
ACYQRAKEEVTKVPEKLLSYAVRCKNLTVSNTRTVLLTPEIYISQNVYEQLLDLLLEGVG
GAQLEEVVEFVEEVIAGLLADQEVRTFSEVIGPVLDIFQGRVKDLDLCQLLLFSYLDLLL
YFSRQKDIATVLVEHIQPKDPNNGLQYQKTLLGTVLNISCLLKTPGVVEGHGFFLNPSRS
SPQEMKVQESNIHQFMDQFHDKLHQLLKNLLQQSGETRHLLLSWLGGCLQANAGRAKIWA
NQMPEIFFQMYASDAFFLNLGAALLKLCQPFCRPRSPKLLTFNPTYCALKELSEEERRNR
NVHARGLDKETCLVPLPPQQSVEYAQSYSLLTENLILTQMTLHLGFHRLHEQMVKMNQSL
HRLQGTWREAQLTGGPAAEQLREQFERLMTVYLSTKAAATQPGMLQCCLNLQASSATLLV
QLGLSNQGPEHAQLSFPLPPLHNSLLCHMPEFFAENLGDFFVFLRRFADEVLESSAESLE
QVLNFITVFMGNVERMKNPHLRAKLAEVLEAVMPHMEPASAGSAQPVMFQRQRVFCSYRH
APHLAEALIAVFVDIEFTGDPHQFEQKFNYRRPMYPILKYMWGKESYRESIKSLAVYASE
NLEAMNPPLFLRYLNLLMNDAIFLLDEAIQYLSKIKLLQLEKDHGEWEGLAPDALREKES
SLQMLGQLARFHNIMSNETIGTLAFLTSEIKGIFVHPFMAERIISMLNHFLQHLVGPKMG
ALKVKDFSEFDFKPQQLVSDICNIYLNLGDEENFCATVPKDGRSYSPTLFSQTVRVLKKI
NKPGEVIVGFGLLADKIKSHADRQLQDEETYADAPDEFLDPIMSTLMLDPVLLPSSNVTV
DRSTIARHLLSDQTDPFNRSPLTMDQIRPNEELKQQILQWLAQQERLQMGPSG
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccagggcaacaacaaccaacacatctcccgcaacccattcgctgcccttttc
agctccctcgccgacgccaagcagtttgcatcgggccagaaaccacattcgcaccatggt
gaaccaccctcggaggactctgaggggagtcagtcggagtcggagaactcggacagcatc
gaggacaatgacgactcggtggccgaaatcagccgctccttcctgtcgcggcaggaactg
tgcgaacagctcaacatcaaccacatgatccagaggatcttcctcatcaccttggacaac
agtgaccccagtctgagaggaggcaatgggattccgccacgctgtgtgttcctggaggag
atggccgctgagattgatgggcaagactggctggacatggacaacatcgagcaggcactc
ttcaacagattactgatgctggagccagggaaccacctcatctacatgacctcgtgtaat
gctgtgaatctctctgctgaccgagacgctggggacaagtgcgccataccgttcctctac
gcctgctaccagagagccaaggaagaggtcaccaaagtaccggagaagctgctgtcgtat
gcggtgcgctgtaagaacctgacggtgtccaacacgcgcacagtcctgctcacccccgag
atctacatcagccagaacgtgtatgagcagctactggatttgctgctggagggagtcggc
ggagcccagctggaggaggtggtggagttcgtggaggaggtgatcgctggcctgttggct
gaccaggaggtgcgcaccttcagcgaggtgatcgggcctgtgctcgatatcttccaaggc
cgtgtgaaagatttggatctctgccagctgctactcttctcctacttggacctgctcctc
tacttcagccggcaaaaagatatcgctacggtattggtggagcacatccaacccaaagat
cccaacaatgggcttcagtatcagaagaccctccttggcactgtgttgaatatctcttgc
ctgctgaagaccccgggggtggtggagggtcacggattcttcctaaacccgtcacgctcc
agtccacaggaaatgaaggtccaggaatccaacatacaccagttcatggaccagtttcat
gacaagctgcaccagctcctgaagaacctgctgcagcagtcaggtgagacgcgccatctg
ctgctctcctggctgggcggctgcctgcaggccaatgccgggcgcgccaagatctgggcc
aaccagatgcccgagatcttcttccagatgtacgcctcagatgccttcttcctcaacctg
ggcgccgcgctgctcaagctgtgccagcccttttgccggccgcgctcgcccaagctgctc
accttcaaccccacctactgcgccctcaaggagctcagcgaggaggagcggcgcaaccgc
aacgtgcatgccagaggtctggacaaagagacgtgtctcgtcccccttcccccccagcag
tcggtggagtacgcccagtcatacagcctcctcactgagaacctcattctcacccagatg
accctgcacctaggcttccacagactccacgagcagatggtgaagatgaaccagtcgctc
caccggctgcagggtacatggcgggaggcccagctcacgggcggaccggcggccgagcag
ctccgcgagcagttcgagcgcctcatgacggtctacctgtcgaccaaggcagcagccacc
cagccgggcatgctgcagtgctgcctcaacctgcaggcgtccagcgccacactcctggtt
caactgggccttagcaaccaggggcccgagcacgcccagctctccttccccctgccgccg
ctacacaacagcctgctctgtcacatgccagagttctttgcggagaacttgggagatttc
tttgtcttcctccgccgcttcgccgacgaggtcctggagtcttctgctgagagcttggag
caggtcctcaacttcatcactgtgttcatgggaaacgtggagaggatgaagaaccctcat
ttgcgggcaaagctggcagaggtgctggaggcggtgatgccccacatggagccggcatcg
gccggctcggcccagccagtcatgttccagcgtcaaagggtcttctgctcctaccgccac
gcccctcacctggccgaggcgctcatcgctgtgtttgtggacattgagttcactggtgat
cctcaccagtttgaacagaagttcaactacaggagacctatgtatcccatcctcaagtac
atgtgggggaaggagagctacagagagagcattaagagtcttgctgtttatgcttccgag
aacctcgaagccatgaatcctccactcttcctgcggtatctgaatctcctgatgaacgac
gccatcttcctactcgacgaagctatacagtacctgagcaagatcaagctactacagctg
gagaaggaccatggcgagtgggagggcctggctcctgatgccctcagagagaaggagtcc
agtctgcagatgttgggacagctggcacgcttccataacatcatgtccaacgagaccatc
ggcacactggctttcctcacatcagagatcaagggtatttttgttcaccctttcatggcc
gagaggatcatctccatgctcaaccacttcctgcagcacctggtcggacccaagatgggt
gccctgaaggtgaaagacttcagcgagtttgacttcaagccccaacaactagtttccgat
atctgcaacatctaccttaacctgggtgatgaagagaatttctgtgccactgtcccaaaa
gacgggcgctcctactctcccacgctcttctctcagactgtccgagtcctgaagaagatc
aacaagcccggagaagttattgtgggtttcgggctccttgctgacaaaataaagtctcat
gcagaccgacagctgcaggatgaggaaacatacgcggacgccccggacgagttcctggac
cccattatgtccacgctgatgctcgaccctgtgctgctcccctcttccaatgtcacggtc
gatcgctcgactatagcacggcacttactcagtgatcagacagacccattcaaccgcagc
ccactcacaatggaccagatccggcccaacgaggagctgaagcaacagatcttacagtgg
ctggcccagcaggagcggctacagatgggccctagtggctag
DBGET
integrated database retrieval system