Oncorhynchus mykiss (rainbow trout): 110503596
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Entry
110503596 CDS
T07259
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110503596
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110503596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
110503596
NCBI-ProteinID:
XP_036825214
UniProt:
A0A8C7LK18
LinkDB
All DBs
Position
3:12368841..12430981
Genome browser
AA seq
2686 aa
AA seq
DB search
MKPLKRQRGCSPPYTRAKGGKKRGATETPPERDNRNKLRKENQDGQPQSTTPAHLPRKQS
TTSSESSQQEPIRGSETPKKEGPREQVPPRQPEVKEKTKDSRGGVGGKPGGPNSTPTSSH
NNTLTIPTPTTSPSPTSMSSRKTATFKARVPKKKYIAEHYAGSNTPSLTFTPAPMHNSHS
NYSSTSSSINIINSSSTNSNNNSNTISNSSRTNTTINGINSISNSHSSSSVSHSLAPSVS
NEERRVAASSHSHGPGEQGMTGASIGPNNGSVAPQERERDPQGGETEAEGAPNSVRSVST
DTASEHDLEVNSQPSTSPARAPYQGSLSGADALAKGLKNQRVLARCRGRDRLNGEQGGRE
RERDGPLSPMFRAGVVRRVSGGSADIQLQGEEGILCYPFQGGTAHSGGEETSVEFILDAP
PPGTASVAIGTRVCVPFRGGGGRDGGEQGTPQLYREGVLSQVDPHPAVSFPYRVLLCEDL
EALENGGREEEGGMEEKRGRAQAQAVWVSRQSLRLLTPPWEMPHPGGSEREREREREERE
RREEMEVEREVCQLSIGMALGGPMGGGVRLVHSFSPDGVVGGHHYGNVPPHPSSLVTTSV
VTITGEGYPDREIEQEREQERQKQPQTPEEDMEMSRFTMGTQHRHILSKPLLGGHSYPSS
QHLVQGLGTPLGSHLSSLTLPGPEALGMTPPPHLPPSKSTLVPLDKTPSQIPTPTPGGGS
TSSSASSSRSRTPLLAALQKYKKGDVVCTPNGIRKKFNGKQWRRLCSREGCMKESQRRGY
CSRHLSMRTKEMEGGGERDRGRGEGGSSSGTVTPSDLRGFDWDETSRDSSEASSRGDSRP
RLVLPSLLPHDFSRFDFDECEAATMLVSLGSSHSGTPSFSPISNQSPFSPAPSPSPSPLF
GFRPANFSPITASSVLPPPRRHRHPSATGGKLGTPGGAERERHTSGVQPSFHTNLTFTVP
MSPSKRKTDVPPPPSSHPHHDYPPKPELEQGDLNPASFPVLSPQTPAHTHAYTPTFSGPR
GLSTPTSRPPSSPATSPPPLLVSPTPPSPPDSGPCRFHPTSQQALRDSPVIVRNPEVPLA
KFTERPLGRGGGGVGEPKSLNSVTPQPVSTLQVPVPINAAAAAATNGTVLLQSPTPTLVL
VSSASPSLTSVTPGYPTLACISITPPSSGPPLTNPASPGEGRGRTERTGSFGGEVQQPVA
CHPSPTALLPLILPAENLHPTPCKDIIMGRPGTVWTNVEPRSVPVFPWHSLVPFLAPTQS
DASTQSGEGQQPINHPQAASLKTESHGCAVLLQETNEDHPSLERGPTTRLTPSTDDLAPE
REAERERPDSETESDVDDPFFPSVLPEPLSVTPVKRRTQSLSALPKDGDKSSPGKREKDH
IRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEA
HFKAHPDWKWCNKDRKKSSSDGRGLPGPGGKDIRERSMSETTEPHGVELKGVGPGLLGVS
ERNPGEGHVGQLPRPRAFSQSAVHSLERSERGNTQALAELSQMCGDGGGQFSGRAQTLSR
SQRGVSEDMTSDEERMVICEEEGDDDVIEDPYPASSIDLKCKERVTDSDSDNASGNESDR
KRVFAPVICSSSSQPTPHGRSVSLSSYPSKRYDEERGGGLSDRRRKRGIEGGGGDGGGVA
SLSLSLSSSGHSVISSPGGPVPSALAPLGLSPLLGLGAVRVASTVVTNVVRPVVSTPVPI
ASKPRDGAASSIPHPPDRRSLPSQQAQLLIGSGVGSGGPGYYSSSSPNPIGAGAGPGGLV
TSLVFPGHSQSTVQLISPSPHPSSHHQLPPTAPVSAPTHNHTNGPLPLSLLQPQFLSSSS
LASPGGKAITQVQYILPTLSASSNPKSPSPQLHNLPNSIFNLPTAPSTHKSIANVKQVGP
GSLMGYASSPAVGVVSPGARVQSQSPVLQGKMLLPMATVRTAPAPAQQYPLVAPPLPVQN
GAQAGSKIFQIAPMPVVQSQLQQGGAGHPGSPFPVTLGTATVLHQGSAPSQTVLLPPPPT
RITYVQSTPGVPSPLPLVSTTTGSSSSQQAQPTPGSAYVSSPLATLGFTAVAPPGQNLVQ
PLITGQPPLQSPVQSPTCPSLPSGPASASVGQIITAIYPPTSITMATGVVSMSAVPPNMV
YTVSSSSSLSTHILPKHTFAPATPTTHSHIQLQSDRQTDRQAGERPTDRMYHSQSEKAAD
RQAEAQPELQAYGQTDRPTLTQADRQTARQAQTFNKSSSLVAPPSGSSLSLRPCSPPLPS
HTSTGSAPGTPKLPQLPVRTPQKIKATVANIPVGSYDGGGRGKEREKNRERESESTGANS
RFSFELEHPGKSASPSQHTHAAEEPPSDRPPEGHGPGDNTDTRSTEASNESGWKDSVPSS
PLPPPLGTDPALPPPQSDKDALPPKKVKARPPPLKRTFDSVDKVLSEVYFEERFAQLPEF
RPEEVLPSPTLQSLATSPRAILGSYRRKRKNSTDLDSSTEDPVSPKRKSRRRSSCSSEPS
TPKSAAKCEGDVFTFDRPAPPSVCPPPGSGTGTGAEGEDILGELEFDKVPYSSLRRTLDQ
RRALVMQLFQEHGFFPSAQATAAFQARYSDIFPTKVCLQLKIREVRQKIMQTAVPSETNE
ASSLPGPSGAQSGEGTGGGAEPLGEEADREREGSPEELRDSQESSR
NT seq
8061 nt
NT seq
+upstream
nt +downstream
nt
atgaagccactaaagagacagaggggatgctctcccccctacacgcgggccaaagggggg
aagaagagaggggcgacagagacccccccagagagggacaacaggaacaaactcaggaag
gagaaccaagacggacagcctcaatccacgacccccgcccacttgccacggaaacaatcc
acaacctcctctgaaagctctcagcaggagccaatcagaggcagcgagaccccaaagaag
gaggggcctagagagcaggtgccgccaaggcaacctgaagttaaagagaagaccaaggac
agcagagggggggttggggggaaaccaggggggcctaacagtacccccacttcctcccat
aacaacaccctcaccatccccacccccactaccagtcccagccctacctccatgtccagt
agaaaaacagccaccttcaaggccagagtccccaagaagaagtacattgctgaacactat
gctggtagcaacacgcccagcctcaccttcacccctgcccccatgcacaacagccacagt
aactacagtagtactagcagtagtattaacatcatcaacagcagtagtactaacagtaat
aacaatagtaataccattagtaacagtagtaggacaaacactactattaatggtattaac
agcattagtaacagccatagtagcagctcagtcagccactcattagcccccagtgtgtcc
aatgaggagaggagggtagccgctagcagccacagccatggcccgggggaacaggggatg
acaggggcctccatagggcccaacaatggcagtgtggccccccaggaaagagagagagac
ccccagggtggggagacagaggcagagggtgcccctaactcagtgcgctccgtatccacg
gatacagccagcgagcacgatctggaggtgaactcccagcccagtaccagccctgctaga
gccccctaccagggcagtctgtccggggcggatgccctggccaaaggcctgaagaaccag
agagttctagcccgctgtcgagggagagacagacttaacggagagcaaggtgggagggag
agagagagggatggacccctgtctcctatgttcagggctggggtggtgcggcgggtgagt
gggggcagcgctgatatccagctgcagggggaggaggggatactctgttacccctttcag
ggggggaccgcacactcggggggggaggagacgagcgtggagttcatcctggacgcccct
ccacccggcacggcgtccgtggccatcgggacacgcgtatgtgtgcctttcagaggggga
ggggggcgagatgggggtgaacaggggacacctcagctatacagagaaggggtgctgtcc
caggtagacccccaccctgccgtgtcgttcccctacagggtgctactgtgtgaggatcta
gaggcgctggagaatggagggagggaggaggagggagggatggaggagaagagggggagg
gcgcaggcccaggctgtatgggtgtccagacagagcctgaggctgctgactcccccctgg
gaaatgcctcacccaggggggagcgaaagggagagggagagagagagggaggagagggag
aggagggaggagatggaggtggagagggaggtgtgccagctgagtattgggatggcgctg
ggtgggccgatgggagggggggtgaggttggtgcatagcttctctccagatggggtggtg
ggggggcatcactatggaaacgtcccgccccacccctcctcgttggtaacgaccagcgtt
gtcaccatcactggagagggttaccctgacagagagatagaacaagagcgggaacaagag
agacagaaacagccccaaacaccagaggaggacatggagatgtctaggttcactatgggc
acccagcatcgccacatcctctccaagcccctcctcggggggcacagctacccctcctcc
caacacctggtccagggcctgggcacgccactgggctctcacctgtcctccctcaccttg
cctggccctgaggccctgggcatgacccccccaccacacctacccccttccaagagcacc
ctggtccccctggacaagaccccctcccagatccccacccctacccctggaggggggtct
acctcctcctcagcctcctcctcgcgctcccgcacccccctgttggccgccctgcagaag
tacaagaagggggacgtggtgtgcacccctaacggtatccgcaagaagttcaacggcaag
cagtggagacgcctctgttccagagagggctgtatgaaggagtcccagagacgaggctac
tgctcacggcacctctccatgagaactaaagagatggagggagggggagagagggacagg
gggagaggagaaggggggagcagttcggggacggtcaccccctcagacctgcgtgggttt
gactgggatgagacgtccagagacagcagcgaggccagcagtagaggagactcccgccct
cggctggtgctgccctccctcctaccccatgacttctccaggtttgactttgacgagtgt
gaggcagcaaccatgctggtgtctctgggcagctctcactctgggaccccctccttctcc
ccaatctccaaccagtcccctttctcccctgccccttctccctcaccctcccccctcttc
ggattccgtcccgccaacttctcccccatcaccgcctcctccgtcctcccccctcctcgc
agacacagacaccccagtgccacagggggaaagttgggcacccctgggggggcagagagg
gagaggcatacctcaggggtccagccgtccttccacactaacctgaccttcactgtcccc
atgagccctagcaaacgcaaaacagacgttccccctcctccctcctcccacccccaccac
gactacccccccaaacctgagctggagcagggggacctgaaccctgcctcgttccccgtc
ctctccccccagaccccagcacacacccacgcttacacacccaccttctccggtccccga
gggctgagcacaccaaccagccggcccccctcctcccccgccacctccccccctcccctc
ctggtgtccccaactcccccctcccctccagactcaggcccctgccgtttccaccccaca
tcccagcaggccttgcgggactctccagtgatcgtgcggaacccggaggttcctctggcc
aagttcacagagcgtccgttaggccgtgggggggggggagtaggtgagcctaagagtctt
aacagcgttactccccagcctgtctccactctccaagtccctgtacccatcaacgctgct
gctgccgcggcaaccaacggcaccgtcctcctccagagccccacccccaccctagtgctg
gtgtcatccgcctcgccctccctgacctccgtcacccccggttaccccactttggcttgc
atctccatcacgcccccctcttcgggaccccccctcaccaacccagccagcccaggggaa
gggcggggtaggacggagaggacaggctcgtttgggggggaggttcagcagccagtggcc
tgtcacccctctcctacagccctgctgcccctcatactgcctgcagagaacctgcacccc
acaccatgcaaagacatcatcatgggacgccccgggacagtctggaccaacgtggaaccc
cggtcagttcctgtgtttccctggcattcattggtccctttcctggcaccaacccagtca
gatgcctctactcagtctggtgagggccaacaaccaatcaatcacccccaagctgccagt
ctgaaaacagagtctcacgggtgtgcagtgctgctacaggagaccaacgaggaccacccc
tccctagagagaggacccacaacacggctgactccctccacggacgacctggccccggag
agggaggccgaaagagagaggccagacagtgagactgagagtgatgtggatgaccccttc
ttccccagtgttcttcctgagcccttgtctgtgactcctgtgaagagacgcactcagtcc
ctcagcgccctgcctaaagatggggacaagagcagccctggcaagagggagaaggaccac
atcaggcggccaatgaacgcgttcatgatcttcagtaagcgtcatcgagcgctggtgcac
cagagacaccccaaccaggacaaccgcacggttagcaagatcctgggcgagtggtggtat
gccctggggcccaaagagaagcagaagtatcacgacctcgccttccaggtgaaggaggcc
cactttaaagcccacccagactggaagtggtgcaacaaagacaggaagaagtctagttct
gatggccgagggctcccggggccggggggcaaagacattagagaaaggagcatgtctgag
accaccgagccccatggtgtggagctgaaaggggtggggcctggcctgctgggtgtgtct
gagcggaatccaggagaggggcatgtaggtcagctaccccgcccccgagccttctcccag
agtgccgtgcacagcctggagaggagtgagaggggcaacacacaggccctggccgaactg
tcacagatgtgtggggatggtggtggacagttttcggggcgcgcccagaccctgtcccgg
tctcagaggggggtcagtgaggacatgactagtgatgaggaacgcatggtcatctgtgaa
gaggagggagacgacgatgtcatcgaggacccgtaccctgccagctccatagacctgaag
tgtaaggagagagtgacggacagcgacagtgacaacgcctctgggaacgagagcgatcgc
aagcgtgtctttgctccagtgatctgctcttcctcctcgcagcccaccccccacggacgc
tccgtctctctctcctcctacccttccaaacgctacgatgaggagagaggaggggggctc
tcagaccgcaggagaaagagaggaatagagggaggaggtggtgatggaggaggagtggca
tccctctctctttccctgtcctcctcaggccactctgtcatctccagccccggaggccca
gttccttctgcccttgccccccttggcctgtctcctctcctcgggttgggggctgtcaga
gtggcctctacagtggtgaccaacgtggttcgtccggtcgtgagcacgccagtccccatc
gctagtaaaccccgagacggagcagcttcatccattcctcacccaccagacaggaggtcc
ctcccatcgcagcaagcgcagcttctgattggatccggagtaggaagcggagggcctggg
tactactcctcatcctcacccaatcccataggtgcaggggcgggtccaggggggctggtg
accagcttggtgttcccggggcacagccagtccaccgtccagctcatcagtccctccccc
catccgtcctcccaccaccagctgccccccaccgcccccgtctctgcccccacacacaac
cacaccaacggccccctgcccctctccctgctccagccccagttcctctcatcgtcatct
ctggcatcccccgggggcaaagccatcacacaggtccaatacatcctgcccaccctatca
gccagctccaatcccaagagcccctcccctcaactgcacaacctgccaaacagtatcttc
aacctgcccacagctccgtccacccacaagtccatagccaatgtgaagcaggtggggccg
ggctcgctgatgggatacgcctccagcccagccgtcggagtggtcagcccgggagccaga
gtgcaatcccagtccccagtcctacagggcaagatgctgcttcccatggcaacagtgagg
acggcacccgcccctgctcagcagtaccccctcgtggctccacctcttcctgtccagaat
ggagctcaagcaggaagcaagatcttccagatcgctcccatgcctgtcgtccaatcccag
ctccagcaaggcggggcagggcatcctgggagcccttttcccgttaccttgggaacggcc
acagtgttgcaccaaggttctgccccatctcagactgtgctgctgccgcccccaccaacc
aggatcacctatgtccagtccacgccaggagtcccctctcctctgcctctggtctccaca
acaacaggctcctcctcctcccagcaggcccagcccacccctggatctgcatatgtttcg
tcacccctagcaacgctgggctttacagccgtagctccccctggacagaacctagtccaa
cccctcatcacaggtcagcctccccttcagtccccagtccagtcccctacctgcccctcc
ctcccctctggcccagcctctgcttcagtgggacagataatcaccgccatctaccctcct
accagcatcaccatggcaaccggggtggtctccatgtcagccgtgccgcccaacatggtg
tacacagtctccagctcctccagtctgtccactcacatccttcccaaacacacattcgcc
cctgccacccccaccacacacagtcacatccagctccagtcggacagacaaacagacagg
caagcaggggagagacccacggacagaatgtatcactctcagtcagagaaagcggcagac
agacaagcggaggcgcagcctgagctacaggcgtacggacagacggacaggccaaccctc
acacaggcggacagacagacggcgaggcaagcccagaccttcaataagagcagcagctta
gtggcgcccccaagtggctcctcattgtcactgcggccctgcagcccccccctgccctct
cacacttccacaggcagtgcaccaggcacccccaaactcccccagctcccggtgagaacc
cctcagaaaatcaaagccactgttgccaacatcccggtgggcagctacgatggaggaggc
cgaggaaaggaaagggagaagaaccgagagagggaaagcgagagcactggagcaaacagt
cgtttttcctttgagctggagcatcctgggaagtcggcgtccccctcccaacacacacac
gctgctgaggagcccccctctgacagaccccctgagggacacggccctggggacaacact
gacacacgcagcacagaggccagcaacgagtcagggtggaaggattctgtcccctcatca
cccctgccccctcccttgggtacagaccctgccctgccacctccccagagcgacaaagac
gcccttcctcccaagaaggtgaaggcccgccccccgccactcaaaaggacctttgactct
gtggacaaggtgttgtcggaggtgtattttgaggagcgttttgctcagctaccagagttc
aggccagaggaggtgctgccctcccccaccctgcagagtctggccacctccccccgcgcc
attctgggcagctaccgccgcaagaggaagaactccacagacctggactcgtcaacagag
gaccccgtgtctcctaagaggaagagtagacgccgctccagctgcagctcggagcccagc
acacccaagagcgccgccaagtgtgagggagacgtcttcaccttcgaccgaccagccccc
ccgtctgtgtgtccccctccagggtccgggacagggacaggagctgaaggagaggacatc
ctgggggagctggagtttgacaaggtgccctactcctctctgagacgcaccctggaccag
agacgagccctcgtcatgcagctcttccaggagcatggcttcttcccctcagcccaggcc
acggcagccttccaggcacgctactcagacatcttccccaccaaggtgtgtctgcagctg
aagatcagggaggtccgacagaagatcatgcagactgccgtcccctctgagaccaacgag
gcttcctcgctccccggaccgtctggcgcccaatcaggggaagggacaggaggaggggcg
gagccattgggagaggaggcggatcgagagagggagggtagtccagaggagctgagggat
tcgcaggagtcttctagatga
DBGET
integrated database retrieval system
