Oncorhynchus mykiss (rainbow trout): 110503599
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Entry
110503599 CDS
T07259
Name
(RefSeq) interferon regulatory factor 2-binding protein 1
KO
K22383
interferon regulatory factor 2-binding protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110503599
04121 Ubiquitin system [BR:
omy04121
]
110503599
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
110503599
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Atypical E3
110503599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
110503599
NCBI-ProteinID:
XP_021437687
LinkDB
All DBs
Position
24:complement(6596697..6601829)
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AA seq
632 aa
AA seq
DB search
MSSSQSSSRRQWCCYLCDLPKMPWAMIWDFSETVCRGCVNYEGADRIEFLIETARHLKIT
HGMQGDRSPGPQPTKHGPGGRDGPMEGGRPPPERFERGRGDYGAPARLPNGLHRIDDGVP
QQDVSGQSPNNARRPMVCTVPPNLMTQGLVGAPHGLLAAVPGLNTRVGGTPLTLSAPMLN
EITKRQLSMGMGVASFLSPEFEKELREKQRNAEALAELSESVRNRADDWAGRPKAVRGAL
LTLSGCTPFNVRFKKDHSLVGRIFAFDAKLTLDFELKIFAEYPCGSGYMFSSLAALVKQM
FHDSQKDSGNKVINLGLKYVEYEKRHGAGDWRLLSELLSDSVRAFKDIPGPDVLPQPYLD
TSCSMLPTALCHMARSAPPARLRRRKASPELQGGEVVTTEEQLRQHWPMGMYPGMAIHLA
ASSLPSTSQPPPHQEGSASHSHSSDPSPITALMSVADNAGAAAGQSPREAPSSSSSGGGG
LGHSSLAVRQSSSSPMAACPAGQQRHLASRNGEPQGASNSTGATTAALPLAGASDQGAGD
PSGSSGPPLCCTICHERLEDTHFVQCPSVATHKFCFPCTRDFIRSQGAGSEMFCPSGERC
PLVGSNVPWAFMQGEVTTILAGDVKVKKERDP
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctcccagtcgtcttcaaggcgacagtggtgctgttacctttgcgatttgcct
aagatgccatgggctatgatctgggactttagcgagactgtctgccgaggctgtgtgaat
tatgaaggggcagaccgtattgaattcctcatagagacggccaggcatttgaaaataact
catggtatgcagggtgacaggtccccgggtccacagcccaccaaacatggcccaggtgga
agagatggacctatggagggtggtaggccacctcctgaacgctttgaaaggggtagaggg
gactacggagccccagcacggctccccaacggtctgcacagaatcgatgacggggtccca
caacaagatgtcagtggacagagccctaacaacgccagacgacccatggtgtgtaccgtt
ccacccaatttaatgacacaaggccttgtgggggctccgcacgggttgctagcagctgtg
cccggtttaaataccagagtcgggggaacccccctcaccctctctgcccccatgctgaac
gagatcaccaagaggcagctgagcatgggcatgggtgtggcctccttcctgagcccagag
tttgagaaggagctgagggagaagcagaggaacgcagaggctctggccgagctgtcagag
agtgtacggaaccgagcagatgactgggccggccgacccaaggctgtacgaggggccctg
ctcaccctctccggctgcacccccttcaacgtgcgcttcaagaaggaccacagcctggtg
gggcggatctttgccttcgatgccaagctgacgctggactttgagctgaaaatctttgca
gagtacccgtgcggctcggggtatatgttctccagcttggcggcgctggtcaagcagatg
ttccacgacagccagaaagactctgggaacaaggtgatcaacttgggcctgaagtatgtg
gagtacgagaaaaggcatggcgcgggtgactggcgactgctctctgagctactgagtgat
tcggtacgggcctttaaggacatccccggccctgacgttctcccccagccctacctggac
accagctgctccatgctgcccacagcgctgtgtcacatggcccgctcggcaccaccagcc
cgcctgcgccggaggaaggcttccccagagctccagggtggagaggtagtgaccacagag
gagcagctccggcagcactggcccatggggatgtacccgggcatggctatccacctagct
gcctcctccctacccagcactagccagccacctcctcaccaggagggctcggcctcccac
tcccacagcagtgacccctcccccatcacagcactgatgagcgtggctgacaacgcgggt
gcagccgctggccagtcaccgagagaagcccctagcagcagcagtagtggtggtggaggc
ctgggccactcctccttggcagtgagacaaagcagcagcagccccatggcagcctgccct
gcagggcagcagcgccacctggcctccaggaacggggaaccccagggagctagcaactct
acaggggccaccacggcagctctccccctggctggggcctcggaccagggagcaggggac
ccctccggctcctctggtccccctctctgctgcaccatctgccacgagcgcttggaggat
actcactttgtccagtgcccgtctgttgcgacccataaattctgcttcccttgcaccaga
gactttatccggagccagggggccggcagcgagatgttttgccccagtggagagaggtgt
cccctggtaggctccaacgtgccctgggccttcatgcagggagaggtcactaccatccta
gctggagacgtcaaggtgaagaaggagcgcgacccctaa
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