Oncorhynchus mykiss (rainbow trout): 110503657
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Entry
110503657 CDS
T07259
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
110503657
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110503657
Transporters [BR:
omy02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
110503657
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
110503657
NCBI-ProteinID:
XP_036817964
UniProt:
A0A8C7S934
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Position
24:7899888..7927442
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AA seq
644 aa
AA seq
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MEMKQSMMMDRENEGGEKEKGEESSQENGRLMLADGGVAEKGDPKVNSGGGSGGVSNGYP
TSTAPSPKEGAGGVPAGALRTLVVQQTSLDQPRETWSKKMDFLLSVIGYAVDLGNVWRFP
YICYQNGGGAFLLPYMLMAVFGGVPLFYMELALGQFHRSGCISIWKHICPIFKGIGFAIC
IIALYIAFYYNTIMAWALYYLLASFRPTLPWTTCSNPWNTVNCLRYLSTDSNITWTNMST
SPAEEFYTRQVLQVHLSPGLHQLGSVSWQLALCLLFIFTIVYFSIWKGVKTSGKVVWVTA
TFPYLVLLVLLVRGATLPGAWRGVVFYLKPDWGKLLSTTVWIDAAAQIFFSLGPGFGVLL
AFASYNPFHNNCYKDALLTSSVNCLTSFLSGFVIFTVLGYMAEMRKIGVETVAKDAGPSL
LFIIYAEAIANMPAATFFAIIFFLMIIMLGLDSTFAGLEGVITAMLDEFPQLLSRRREWF
VLGLVCVCYLGALSTLTYGGAFVVKLFEEYATGPAVITVVFLEVIAVSWFYGTSRFCADV
HMMLGFSPGLFWRVCWVAICPIFLLFIIVSFLAFPPEVKLFDYVYPPWTTVLGYCIGVSS
FICVPAYMVYHLLTAKGTFKQRLLKGITPVPSGPHSDIIITHAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaaacagtcaatgatgatggacagagagaacgaaggaggggagaaagagaaa
ggggaggagtcatcgcaggagaacggcagactcatgctggctgacggaggggtggcagag
aagggggaccccaaagtgaactctggtggggggtcaggaggggtgtccaacgggtacccc
acgtccacagcaccgagccccaaggagggagcggggggtgtacccgcaggggccctcagg
actctggtggtccagcagaccagtctggaccagccccgggagacctggagcaagaagatg
gactttctgttgtctgtgattggctacgccgtggacctgggaaatgtgtggcgcttcccc
tacatctgctaccaaaacggcggaggtgccttcctgctgccctacatgttgatggcggta
ttcggtggcgtgcctctgttctacatggagctggcactggggcagttccaccgcagcggc
tgcatctccatctggaaacacatctgccccatcttcaagggtatcggcttcgccatctgc
atcatagcgctgtacattgcgttctactacaacaccatcatggcgtgggccctgtactac
ctgctggcgtcgttccggcccaccctgccctggaccacgtgctccaacccctggaacacg
gtcaactgtctccgctacctgtccaccgacagcaacatcacctggaccaacatgtccacc
tcgcccgccgaggagttctatacgcgtcaggtactgcaggtacacctgtccccaggtctg
caccagctcggcagtgtgagttggcagctggctctctgcctcctgttcatcttcaccatc
gtctacttcagcatctggaagggagtcaagacctctggcaaggtggtgtgggtgacagcc
accttcccctaccttgtcctgctggtgctgctcgttcgtggggccactctgcccggagcc
tggaggggcgtggtcttctacctcaaacctgattgggggaaactgctcagcaccacagta
tggattgatgctgcagctcagatcttcttctctctggggccaggtttcggggttctcctg
gcctttgccagctacaacccctttcacaacaactgttacaaggatgcgttgctgaccagc
tctgtgaactgcctgaccagtttcctctctgggtttgtcatctttaccgtgctcggctac
atggctgaaatgcgcaaaataggcgtggagaccgtagccaaggatgctggtcccagtctg
ctgttcatcatctatgctgaagccatcgccaacatgcccgctgccaccttcttcgccatc
atcttcttcctcatgatcatcatgctggggctggacagcacgtttgccggtctggagggg
gtgatcacagccatgctggatgagttcccccagttgttgtctaggaggagggagtggttt
gtcctgggcctggtgtgtgtctgctacctgggagcgctctccaccctcacctacggaggt
gcgtttgtggtgaaactgtttgaggagtacgccacgggacctgctgtcatcactgtggtc
ttcctagaagtcatcgccgtttcctggttctacggcacgagtcgtttctgtgctgatgtc
catatgatgctgggcttctctcctggattgttctggagggtgtgctgggtggccatctgc
ccaatattcctactgttcatcattgtcagtttcctggcgttccccccggaggtcaagttg
tttgactacgtctacccaccttggaccacagttctgggctactgcatcggagtgtcctcc
ttcatctgtgtaccagcctacatggtgtaccacctgctcactgccaaagggacctttaaa
cagcgtctcctgaagggcatcacccctgtacccagtgggcctcacagtgacattatcatc
acccacgccgtctga
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