Oncorhynchus mykiss (rainbow trout): 110503718
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Entry
110503718 CDS
T07259
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D-like
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04020
Calcium signaling pathway
omy04080
Neuroactive ligand-receptor interaction
omy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
110503718
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110503718
04082 Neuroactive ligand signaling
110503718
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110503718
Ion channels [BR:
omy04040
]
Ligand-gated channels
Glutamate (ionotropic)
110503718
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
110503718
NCBI-ProteinID:
XP_036817602
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All DBs
Position
2:19131905..19259074
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AA seq
1789 aa
AA seq
DB search
MNFNIAVIHAGASVQVEAAAGPGGRVLYPGFGRAHSSLGESVITQWGSANVIWLQVNDSS
PKTLLSQLCDLLAARPLQGLVYEEERPPPTAWGPLAPMLEFVSAQTGLPIVAVGGGAGLG
RMQQESGSIFLQFSSSTSLQLEVIFKILEEYDWTTFSVVSTRHHGYQDFLSVVDGLTDGS
FIGWEKKSVVMLNVTDDPGGARTRRLLKENEAQVRLLYCSQEEAELVFKAAWAAGQAGPS
HMWFAVGPALSGLGMAGLPRALFAVRPQGWKDKPRMRIARGVSILTHGAVALRRDYGASG
GPNFVTNCMTESNQTHRVRGRMRYFSNITLGGRDYSFDSDGYLANPVLEVISYTPGKGWE
DVGMWENGKLDLVYPAWSRYGPFLQPPDGAQHLRVVTLEERPFVIVELADAASNTCIRDS
VPCRRPLNASIPVQDPPKKQCCKGFCIDILKRLAKIVGFTYDLYLVTNGKHGKKIDGVWN
GMIGEVVGQRADMAIGSLTINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPYS
PAVWVMMFVMCLTVVAVTVFIFEFFSPVGYNRSLSSGKKAGGSTFTIGKSVWLLWAIVFN
NSVPVENPRGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQHPT
EQYPPLKFGTVPNGSTEKNIRSNYPGMHHYMVKYNQRGVEDAINNLKTGKLDAFIYDAAV
LNYMARKDEGCKVMTIGSGKVFATTGYGIALHKNSRWKRPLDLALLQLVGDDEIEMLERL
WLSGICHNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWRLRHCMATSSG
RLDFLLAISRGMYSCCSFEDETTPGGAKSSMAMLPHHPGTMVTVPPPPHLVGASSTNPAL
TMAQQQQSQPVYKTQLPGSPPTVVHSGTALGPSNTPMLGAPLPCSTFLPRPDRRLAVVDR
WRLPKAGTATNPMAVHGTVADMGPFPQKVAPTWGTTAGGVGVGGGGGLDGYKRYYGPIDP
EGLGPCMDQPAGSQTPKTAPRSHPQPPPATVAFYSEKGPDQGVGKRVVGGGGTGCQGKGG
VKPLGTPRLPPKSQAVGVTPVPLPTNPPLPQPSPPLPSSFWRKRRPKKPKEPGGPLYENI
LPLGRRGGGRDGARDGGGRRGRPLSPPLPLPVTVPMSPTYTPPSPSTSLPYTSSTSSSSS
NTSSTSSSTSSSRSSSPSSSSSLTSHSTREGLDAEDDDEDEELTEESSLLLGRGRDRQRS
IISSRSLSHGRQPPPIPPRKPRPARGARNRERERERGGSQLAQLQEWWAGWGDRERDRSG
GGDDERKREKKRRKDKEKKKKKKKRKKREERERERDKERKRRRVKKKRKKKALKKRKKSS
GRSEQEEGDVEADREGVGDGGREGGMPDYSSFPTQYRSTFGEKGRDSAWAGERERGRREG
EEEEGGDREEDSSRSRERRPKSSRSHSRHRPPSKRYPKLPASVKFWVSGGNGEGGDPNSG
TPPSSLPPLISLSKRRRSGGVERREGGREGEKRPLLMHYEKGRANIQEGLSFHEWDSEED
DEEDVGEERQRDRARERVEERVRRAGGRGAVSESERDRARTEESYSDEGSSGEFGRFERY
WEGREGAGGPGSSGIGGIGGGSWFFGTYPSREKGGSINSRDDSILGRVEGWGGGGGRFLG
FRARRRSHGHGKRGSTALSHSQEELLPHCHSFSGGSRPKPPPKPDQGQAKSGSQASLSTQ
QPGVAKLLYQRLRSVPQPGRFYSPHLPLKAKSLCSRRGSAHFSSLESEV
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcaacatcgctgtgatccacgcgggggccagcgtgcaggtagaggcggcggcc
gggcccgggggaagggtgctctaccctgggtttggccgggcacacagctccctgggggag
agcgtgatcacccagtggggctctgcaaacgtcatctggctccaggtgaatgacagtagt
cctaagactctgctgtcccagctgtgtgacctgctggcagcgaggcccctacagggcctg
gtctacgaggaggagaggccaccacccaccgcctggggacccctggcccccatgttagag
tttgtctctgctcagactggactacccatagtggctgtaggcggaggagcagggctgggg
aggatgcaacaggagtcaggctccatcttcctccagttcagctcatccaccagcctccag
ctggaggtcatcttcaaaatactagaggagtatgactggaccaccttctcagtggtgtcc
acccgtcaccatggctaccaggacttcctgtcagtggtggacggcctgacggacggctcg
ttcatcggctgggagaagaagagcgtggtcatgctgaacgtgacggacgacccgggaggg
gcacgcacgcgtaggctgctcaaggagaacgaggcgcaggtacgtcttctctactgttcc
caggaggaggccgagctggtgtttaaagcagcctgggccgcgggtcaggctggaccctct
cacatgtggttcgctgtggggccagccctgtccggccttggcatggcgggtctccccagg
gccctgttcgccgtgcgtccacagggctggaaggacaagccccgcatgaggatcgcccgg
ggcgtgtccatactgacccatggggcggtggcactgcgccgcgactatggggcctctgga
gggccaaactttgttaccaactgcatgacggaatccaatcaaacacacagggtgcggggg
aggatgaggtatttcagcaacatcacgttgggtggcagagactactcttttgacagtgac
ggttacctggccaaccccgtcctagaagtcatctcctatacacctggcaaaggctgggag
gatgttgggatgtgggagaacggtaagttggatttggtttatccagcgtggtcgcgttac
ggtccattcctccaaccgcctgatggcgcccagcacctgcgcgtggtcactctggaggaa
cgtccgtttgtcatcgtggagctggctgacgccgcctccaacacctgcatcagagactct
gtaccctgccgacgacccctcaacgccagtattcctgtccaggatcccccaaagaaacag
tgctgtaagggcttctgcatcgacatcctcaaacgattggccaagatcgtgggtttcacc
tatgacctctacctggtgaccaatggaaagcacgggaagaagattgatggagtgtggaat
ggcatgattggagaggtggtgggacagcgagcagatatggccatcggatccctcaccatc
aacgaggagaggtcagaggtcgtggacttctccgtccccttcgtggagacgggcatcagc
gtcatggtctcccgtagcaatggaaccgtctcaccctctgccttcctggagccctacagt
ccagcggtgtgggtgatgatgttcgtcatgtgcctgaccgtggtggctgtgaccgtcttc
atatttgagttcttcagtccagtcggctacaaccgcagcctttccagcggaaagaaggca
ggaggctctacgttcaccataggaaagtctgtgtggttgctgtgggccattgtgttcaat
aactcggtcccagtggagaaccccagaggaaccaccagtaagatcatggtgctgatctgg
gccttcttcgcggtcatcttcctggcttcctacacagccaacctggctgccttcatgatc
caggaggagtatatagacactgtctctggactctcagacaaaaagttccagcaccccaca
gagcagtacccccctctgaagtttggcacggtgcccaatggaagtacagagaagaacatc
cgcagtaactaccctggcatgcaccattacatggtcaaatataaccagagaggggtggag
gacgccattaacaacctcaagactgggaagttggatgcctttatctacgatgcagctgtg
ttgaactacatggccaggaaagacgagggttgtaaggtgatgaccataggctctgggaag
gtatttgccaccacaggctacggtatcgccctgcacaagaactcccgctggaaacgcccc
ctcgacctggccctgctgcagctggtgggagacgatgagattgagatgctggagcgtctg
tggctgtctggtatctgtcacaatgataagattgaggtgatgagcagtaagctggacata
gacaacatggcgggtgtcttctacatgctactggtggctatggggctcagtctgctggta
tttgcctgggagcacctggtctactggaggctcagacactgcatggctaccagctccggg
agactggacttcctactggccatcagtaggggcatgtacagttgttgtagctttgaggat
gaaaccacgccgggcggggccaaatcctccatggctatgctcccccaccatcctggcacc
atggtaacagtcccgcccccgccacacttggtcggtgcgtcgtcaaccaacccggccctg
accatggcgcagcagcaacagtcacagcccgtctacaaaacacaactacctggatcccct
cccaccgtggtgcattctgggacggcgctggggccctccaacactcccatgctgggggcg
cccctgccctgctccacattcctcccccggcccgatcgcagactggccgtggtggaccgc
tggaggctgcccaaggctgggaccgccaccaaccccatggccgtgcacgggaccgtcgca
gacatgggacccttcccccagaaggtggctccgacctggggcacgacagctggaggagtg
ggagttggtggtggtggggggctggatggatataaacgctactatggacccatcgaccct
gagggtctggggccctgtatggaccagccggcagggtcccagacccccaaaacagccccc
aggagccaccctcaaccccctcccgccactgtggccttctactcagagaaaggtcctgac
cagggggtggggaagagggtggtgggaggtggtggtactgggtgtcaggggaagggaggg
gtcaaacctttggggacgcctcggctgcctcctaaaagccaagccgtgggcgtgacccca
gtccctctgcccactaaccccccgctgccacaaccctccccccctctcccctcatccttt
tggaggaagcgccggcccaagaagcccaaagagccaggcgggcctctgtacgagaacatc
ctaccgctggggcgcaggggaggaggaagggatggagcgagggatggtggagggaggagg
ggacgccccctctctcctcctctcccactccccgtaaccgtgcccatgtcccccacctac
actcccccttccccctccacctcactcccctacaccagctcaacttcctcctcttcctct
aacacatcgtccacctcttcctctacctcctcctctcgctcctcctctccttcctcctcc
tcctccttgacctctcatagcacgcgggaaggtttggacgcagaggacgatgatgaggat
gaggagctgaccgaggagtccagtcttctcctggggagggggagggacagacaacgttca
attatctcctctcgctctctcagtcacgggcgccagccaccacctataccaccccgaaaa
ccacgccctgcccgaggggcgagaaacagggagagggagagggagagaggaggtagccag
ttggcccagttacaggagtggtgggcgggctggggtgatagagagagggatcgcagtgga
ggaggagatgacgagaggaaacgagagaagaagaggaggaaagataaagagaagaagaaa
aagaagaagaagaggaaaaagagggaggagagggaacgagagcgagacaaagagaggaag
agacggagggtgaaaaagaagcggaagaagaaggcgctgaagaagaggaagaaatcgtct
gggcgttctgagcaagaagagggggatgtggaggcagatagggagggagtgggggatgga
gggagagaaggagggatgccagactactcttcctttccaacccagtatcgtagtacgttt
ggggagaaagggagagattcagcatgggcaggagagagggagcgaggaaggagggaggga
gaagaggaagaggggggtgatagagaggaggatagcagcaggagcagggaaaggcggccc
aaatcatcccgttcccactccagacatcgaccccccagtaagcgctaccccaaactcccc
gcctcggtcaagttttgggtgagcggaggaaacggggaagggggggaccccaactctgga
acacccccctcctccctccctcccctcatctcactctccaagaggcggaggagtggaggg
gtcgagagaagggagggagggagagaaggagagaagaggcctctgttgatgcactatgag
aaaggcagggctaacatacaggaggggctctccttccatgagtgggactctgaggaggat
gatgaggaagatgtgggggaggagaggcagagagacagagcgagggaacgggtggaggag
agggtgaggagggcgggtgggagaggtgctgtgtcagagtcagaaagagacagggcaaga
acagaggaaagttactctgatgagggctcatcaggggagtttgggcgatttgagaggtac
tgggaggggagggagggggctggaggaccagggagtagtgggataggggggatagggggg
gggagctggtttttcggcacatacccctccagagagaaagggggcagcatcaacagcaga
gacgactctatactagggcgagtggagggctggggggggggcggggggagattcttgggg
ttcagggccaggaggcggtcacacggccatgggaagagaggaagcacggccctgtcccac
agccaggaggagctgctcccccactgccacagcttcagcgggggctcacggcccaaaccc
cctcccaaaccagaccagggccaggccaagtcaggcagccaggccagcctcagcacacag
cagccaggagttgctaagctcctgtaccagagactacggtcagttcctcagcccggacgc
ttctactccccccacctgccactcaaggccaagagcctatgctcccgacgaggctccgcc
catttctccagcctggagagcgaggtatga
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