Oncorhynchus mykiss (rainbow trout): 110503741
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Entry
110503741 CDS
T07259
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110503741 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110503741 (trip12)
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
110503741 (trip12)
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
HECT type E3
110503741 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
110503741
NCBI-ProteinID:
XP_021437901
Ensembl:
ENSOMYG00000032748
LinkDB
All DBs
Position
24:11048636..11106085
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AA seq
2065 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDHTVTGRLQSEQVKHKTNSPPESRRPKSKASKAA
PSSASGQSRGHSSRSSSLSLSVASFVLQDDPDAAGTSEREPTGHQSKSEGTTRGLKRSSA
PDLNNTYTPTPAKKSKSHPPPRDHTTESKKGPAKSSKKRPLAPELPTPTGRGQSSKSGAS
GASPTQKRKKADSLPGLSSTAGSLPNRTDGRSAKPTKLASKSAASAKAGCSTVTDSSSSA
STSSSSSTGPNSATSTQGARLKQGKDQNKARRSRSASSPSPRRSTRDREQAKAAVSSKFE
WASRFSPKVNLPKPKLSLPGSSKPETSSKPGPSGLQAKLASLRKSTKKRSESPPAELPSF
RRSTRQKTTGSCASTSLCSRRGSGLGKRGAADARRQEKMADSDNNQDGANSSAARTDEAP
QGASGTASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHR
TIGSGASSKAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALITL
LQMEHNFDIMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEM
LSRRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVSDSLPLLT
QRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASRDLLTNIQQLLVVTPPVLSSGMF
IMVVRMFSLMCSNCPCLAVQLMKQNIAETLRFLLCGAANGSCQEQIDLVPRSPQELYELT
SLICELMPCLPREGIFAVDLMLKKGSAQATEGAIWQWRDDRGLWHPYNRIDSRIIETAHQ
NGEDEISLSTLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPTTGGHQEVRREDARA
QLMKEDPELAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIFFADAELLKDVLRNH
AVSSHIASMLSSQDLKIVVGSLQMAEILMQKLPDVFSVFFRREGVMHQVKNLAESEAFLT
SPPKACTSGTASLCTTTISTATTTAASNATPDLGSPSFQHSMDDSLDLSPQGRLSDVLKR
KRLPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGKLGAQTNSTNS
EPSRTAGVSGMARAPPKDSVSNNRDKIKAWIKEQACKFVARYFNTEKIDGSNPALNVLQR
LCTATEQLSLQMDGGVECLVEICSIVSESDVSSFEIQHSGLVKQLLLYLTSSSDRDLVSR
DVRLKRFLHVFYGCPIPGMEPAGRLEPSENGPLLSLVHKMNNCLSQMEQFPVKVHDFPSG
NGNGSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGY
GRIREEDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQFS
LQSEEERESTDDEANPLGRAGIWTKTHTIWYKPVRDDEDGTKDAVGGKRGRAQTAPTKTS
PRNAKKQDELWHDGVCPSVASPLEMYLMSEPPESITFDDPSLDVNLLLRVLHSISSYWFY
LYDNAVSKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTR
QMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINREELLKQAESVMQ
DLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLSNPKGSQEGT
KYMFSSRGLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWML
RHETSISSHDLVNIDPGVAKSIQHLEDIIRQKKRLEQDLSQTRETLQQALESLNMNGCSV
EDLGLDFTLPGFPNIELKKGGKDVPVTIYNLEEYLRLVVYWTMNEGVSRQFESFREGFES
VFPLHHLQYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAVGFLFDVLSSFD
AEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPD
YSSIEIMRKKLLIAAREGQQSFHLS
NT seq
6198 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccatacagtcacgggaaggttgcagtcagagcaggtaaaa
cataaaacaaattcccctcctgaaagtagaagacctaaatctaaggcttccaaagccgca
cccagctcagcctctggccagtccagggggcacagctcaagaagtagcagtctgtcactg
tctgtggcttcatttgtgctgcaagacgacccagacgccgcagggacatccgagcgagag
ccaacaggtcaccaatccaagagtgaaggcaccacccgagggttgaagagaagttctgca
cctgatctcaacaacacctacacccccaccccagccaagaagtccaaatcccaccctcca
cccagagaccataccactgagtccaagaaaggccctgccaagtcctccaagaagagaccc
ctggctccagagctgcccacgcccacaggccgcggccagagcagcaagagcggggcctct
ggggcctcaccaacccagaaacggaagaaggctgactccctccccggtctgagcagcact
gctgggtccctccccaaccgtaccgacggcagatctgcaaaacccaccaagctggcgtcg
aaatcggccgcctcagccaaagctgggtgtagcaccgtgactgactcctcctcttctgcc
tccacctcctcctcctcctccaccggcccaaacagtgccacctccacgcagggcgccagg
ctcaagcagggcaaagaccagaacaaggcacgtcgctcccgctccgcctccagcccttcc
ccacgccgaagcacccgcgacagggagcaggccaaagctgcagtctcgtccaagtttgag
tgggcctcccgcttcagtcccaaagtcaacctgccaaagcccaaattgtccctacctggc
tcctctaagcccgagacctcctccaaacctgggccctcaggactacaagccaaactagca
agtttgaggaagtccactaagaagcgcagcgagtctcctccagcagagctccccagcttt
cggcggagcacacgtcagaagaccacgggctcctgcgccagcaccagtctgtgcagtcgg
cgaggctcaggcctgggcaagcgcggggcagccgacgctcgccgacaagagaagatggcc
gactcggacaacaaccaggacggggccaactcctcggccgcccgcaccgacgaggccccg
cagggggcttcaggtacagcttctagttcagtggccggagctgtagggatgaccacatcc
ggtgagagtgagtccgatgactctgaaatgggcagactccaagccctgttggaggccagg
ggtctacccccacacctctttgggcccctgggaccccgtatgtcccagctgtttcacaga
accataggcagtggagccagctccaaagctcagcagctgctgcagggcctgcaggccacc
ggtgacgagtcccagcagctccaggccgccatcgagatgtgccagctgctggtgatgggc
aacgaggagacgctaggaggcttccctgtgaagagcgtggtgcccgctctgatcacattg
ttgcagatggagcataattttgacattatgaaccacgcctcccgtgctctcacttacatg
atggaggcgctgcctcggtcctctgctgtggtcgtggacgccatccctgtcttcctggaa
aagcttcaggtgatccaattcattgatgtggcagagcaggccctgactgccttggagatg
ttgtcaaggcgtcacagcaaagccattctgcaggctggtggtctggctgactgtctgctg
tacctggagttctttagcatcaacgcccagaggaacgccctggccattgccgccaactgc
tgccagagcatcacccctgacgagttccactttgtctctgactctctgccactgctgacc
cagagactcacacaccaggataagaaatctgtcgaaagcacttgtctctgttttgccaga
ctggtggataactttcaacacgaggagaacctgctgcagcaggtggcctcgcgggacctg
ctgaccaacatccaacagctgctggtggtcaccccgcctgtgctcagctcgggcatgttc
attatggtggtgcgcatgttctccctcatgtgctccaactgcccctgtctggctgtgcag
ctcatgaagcagaatattgcagagactctgcgcttccttctgtgcggcgcagccaacggt
agctgtcaggagcagattgacctggtgccccggagcccacaggagctctatgaactcacc
tcactcatctgcgagctgatgccctgccttcctagagagggcatctttgctgtggacctc
atgctgaagaagggcagtgcccaggccacagagggggccatctggcagtggagggacgac
cggggcctgtggcacccctacaaccgcatcgacagtcgcatcattgagacggcccaccag
aacggagaggacgagatcagcctgtccaccctgggccgcgtctacactattgacttcaac
tctatgcagcagataaacgaggacactggcacagcacggggtatccagaggaaacccaac
cccttagccaaccccactactgggggtcaccaggaggtgagacgggaggatgcacgggcc
cagctgatgaaggaggaccctgagctggccaagtgcttcatcaagaccctgttcggtgtg
ctgtacgaggtgtacagctcgtcggccggcccagccgtcagacataagtgcctccgagcc
atcctcaggatcatcttcttcgccgatgccgagctcctcaaggacgtgctgagaaaccac
gctgtgtccagtcacattgcctccatgctgtccagccaagacctgaagattgtagttggc
tctctgcagatggccgagatcctcatgcagaagctgcccgacgtattcagtgtcttcttc
agaagagaaggtgttatgcaccaggtgaagaacctggctgagtcagaggccttccttacc
agtcccccaaaggcgtgcaccagcggcacagctagcctgtgtaccaccaccatcagcact
gcgaccactacggcggcctccaacgccaccccagacctgggctcgcctagcttccagcac
agcatggacgactcactagacctcagtccacaggggcggttaagtgatgtgctgaagaga
aaacgtctgcctaagagagggcccagaaggcccaagtactctcctcccagggatgatgac
aaagtagacaatcaggccaagagtcctaccactactcagtcccccaaatcctccttcttg
gccagtctgaaccccaagacctggggcaagctgggcgcccagaccaacagcaccaactct
gagccctctcgcacggccggggtgagcggcatggcacgcgcccctcccaaggactcagtc
tccaacaacagggacaagatcaaggcctggatcaaagagcaggcctgtaagtttgtggct
cgctacttcaacactgaaaaaattgatggcagcaaccccgcactgaatgtactccagaga
ctctgcaccgccacggaacagctcagcctgcagatggacggtggtgtggagtgcctcgtg
gagatctgcagcatcgtgtcagagtcggacgtgtcgtcgttcgagatccagcatagcggc
ctggtcaagcagctgctgctctacctgacctccagcagtgaccgtgacctggtcagccgt
gacgttcgcctcaagaggttcctgcacgtcttctacggctgcccgatcccggggatggag
ccggcaggccgcctggagccgtctgagaacggacccctgctgtcactggtgcacaagatg
aacaactgcctaagccagatggagcagtttcctgtcaaggtgcacgacttccccagtggc
aacggcaatggaagcagagggtctcaggccctgaagttcttcaacacacaccaactcaag
tgtcagctgcagaggcacccggactgtaccaatgtgaagcagtggaaggggggcccggtg
aagattgatcccctggccttggtacaggcaattgaacgttacctggttgtccgaggttac
ggacgaatcagagaggaggatgaggacagtgacgatgatggttcagacgatgaaattgac
gaatcgttggcggcccagttcctgaactctggcagcgtgcgccaccggctacaattctac
atcggcgaccacctgctgccctacaacatgacggtgtaccaggcagtgcggcagttcagc
ctgcagtccgaggaggagagagagtccacggacgacgaggccaacccgctcgggcgggct
ggcatctggaccaaaacccacaccatatggtataagccagtgagggatgatgaggatggt
actaaggatgcggtgggaggtaagaggggccgggcacagaccgcccccaccaagacctca
ccccgcaacgctaagaaacaggacgagctgtggcacgacggcgtgtgtcccagcgtggcc
agccccttggagatgtacctcatgtcggagcccccggagagcatcaccttcgacgacccg
tctctggacgtcaacctgctgctgagggtgctgcactccattagtagttactggttctac
ctgtatgacaatgctgtgtctaaggagatcatccccaccagtgagttcatcaacagtaag
ctgacagccaaggccaaccgacagctgcaggaccctctggtcatcatgaccggcaacatc
cccacctggctcacagagcttgggaagacctgtcccttcttcttcccgttcgacacacgg
cagatgctcttctatgtaacagcgtttgaccgtgaccgggccatgcagcgcctcctcgac
accaaccccgagatcaaccaatcagattctcaggacagccgcgtggcgccccgcctcgac
aggaaaaagcgaacgataaaccgtgaggagctgctgaagcaggcggagtcagtgatgcag
gacctcggcagctccagagccatgctggagatccagtatgagaatgaggtgggcacaggg
ctgggtcccaccctggagttctacgccctggtctcccaggagctgcagagggccgacctt
gggctgtggaggggtgaggaggtcaccctgtccaaccccaaaggaagccaagaagggacc
aagtacatgttcagctcccgagggctgtttgccgttcccttcggcaggacaaccaaaccg
gcgcacatcgccaaaatcaagatgaagttccgcttcctgggcaagctgatggccaaggcc
ataatggacttcagactgctggacctgcccctggggctgcccttctacaagtggatgctg
cggcacgagacatccatcagctcccacgacctggtcaacatcgacccgggcgtggccaag
tccatccagcacctggaggatatcatccgccagaagaagaggctggagcaggacctctcc
cagacaagggagaccctgcagcaagctctggagagtctcaacatgaacggctgctctgtg
gaggacctgggcctggacttcaccctgcctggtttccccaacattgagctgaagaagggg
ggcaaggatgtccctgtcaccatctacaacctggaggagtacctcaggctggtggtctac
tggacgatgaacgaaggcgtgtcccggcagtttgagtctttcagggaagggttcgagtcg
gtcttccccctgcatcacttgcagtatttctaccctgaagagttggatcagctgctttgt
ggcagcaagtccgagacctgggacgtcaagaccctgatggagtgctgtcgtcctgaccac
ggctacacgcatgacagtcgtgctgttgggttcctgtttgatgtgctcagtagttttgac
gcagagcagcagagactcttcctgcagtttgtcacaggaagccccaggctgcctgttgga
ggtttccgtagtctgaacccgccgctgaccattgtgcggaagacttttgagtcaacggag
aacccggacgacttcctgccctcggtaatgacctgcgtcaactacctgaagctgcccgac
tactccagcatcgagatcatgcgcaagaaactgttgattgcggcccgagagggccagcag
tccttccacctgtcctga
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integrated database retrieval system
