KEGG   Oncorhynchus mykiss (rainbow trout): 110503839
Entry
110503839         CDS       T07259                                 
Name
(RefSeq) protocadherin-16
  KO
K16507  protocadherin-16/23
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:omy04515]
    110503839
Cell adhesion molecules [BR:omy04515]
 Cadherins
  Cadherin related
   110503839
SSDB
Motif
Pfam: Cadherin RET_CLD1 Cadherin_pro
Other DBs
NCBI-GeneID: 110503839
NCBI-ProteinID: XP_021438068
LinkDB
Position
24:complement(15415537..15443172)
AA seq 619 aa
MKTEAKGLGRSVSRSLQDEGRWSRGVLLLAYIVLELITVHSSTVLGNLELQLDEEQPAGT
IVGDISAGLPPGVTANLYFISDHEGTGVGSDLDIDESTGIIKTAKVLDHELRDRYNFIAV
TMTGVTVEVTITVNDINDHAPTFPRRRATFKIPEMTAVGTRFPLEPAVDGDKGQLTTQGY
LIKDGNPGQAFFLETRRGSNQVLYLDLVVNTLLDSETRPSYTLSLEAFDGGSPKRTGQMV
LDVTVQDINDNAPVFNQSRYHAIISENLQPGSNILQVFASDVDQGDNGLVLYEINRRQSD
PESYFVIDSRTGVITLNKPLDFEMRRVHELVVQARDNATQPEVTNAFVTIHVRDYNDNQP
TMTIIFLSEDGSPQISEGAQPGQYVARISVTDPDYGEYANVNVSLEGGDGKFALTTKDNI
IYLMCVDQILDREERDTYELRVMATDAGTPPLRAESSFTIQVTDVNDNPPLFDQQQYRQV
IPEVVFPGSFVLQVTARDKDQGPNGDITYSLLQDGKAGQDENQAQWFTIDPVTGIITTLS
QLDYESQPRPNVTVVATDRGRPSLSSTALVHVVLQDINDNEPVFGTNFYNVSIKENTAAG
TCILEVGHCLFSSSQPVDR
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgaagaccgaggccaagggtttggggcggtctgtgtcgaggtcgctgcaggatgagggc
cggtggagccgaggggtcctgctgctggcctacatcgtcctggagctgatcaccgtccac
tcctccaccgtcctggggaacctggagctccagttggacgaggaacagccagctgggacc
atcgtaggagacatcagcgctgggttaccgcctggtgtcaccgcaaatctttacttcatt
tcagatcacgagggcaccggggtggggagtgacctggacatagatgaaagcacgggcatc
atcaagacagccaaggtgttggaccatgagctgagggaccgatacaacttcattgcagtg
actatgacaggtgtgaccgttgaagtgaccatcacagtgaatgacatcaatgaccatgct
cctacattcccccggaggagagcgacgttcaaaatcccggagatgacagcggtgggaacc
aggttccccctagagccggcggtggacggggacaaaggccaactgactacccagggatac
ctcatcaaagatgggaaccccggccaggctttcttcctggagacccggagaggatccaac
caggttctctatctggacctagtggtcaacactcttctggacagcgagaccagaccgtct
tatacgctatccttggaggcgttcgatggaggctcccctaagaggactggtcagatggtg
ctagatgtgacggttcaggatatcaacgacaatgctccagtcttcaaccagagtcgctac
cacgccattatctcagagaatctgcagccgggtagcaacatcctccaagtctttgcctct
gacgtcgaccagggagacaacggtctggttctgtatgagatcaaccgcaggcagagcgac
ccggagagctacttcgtcattgactctcgtacgggtgtcatcacgctcaacaagcctctg
gactttgagatgcggagggtccacgagcttgtggtccaggcaagggataacgccacgcag
cccgaggttaccaatgccttcgtcacaatccacgtacgggactacaatgacaaccagccc
accatgaccatcatcttcctcagcgaagacggctccccacagatctccgagggtgcccag
cctggccagtatgtcgcccgcatctccgtcaccgacccagactacggagaatacgccaat
gtcaacgtctccttggaaggaggggacgggaagtttgccctgaccaccaaggacaacatc
atctacctgatgtgtgtggaccagatcctagaccgagaggagagggacacatacgaactc
agggtgatggctacagacgcaggcacccctcctctcagggctgagtcctcctttacgata
caagtcactgacgtcaatgacaaccctcctctgtttgatcagcagcagtacagacaggtc
atacctgaggtggtgttcccagggagcttcgtgttgcaggtcacggctagagacaaagac
caggggcccaatggagacatcacatacagcctcctccaggatggcaaggccggccaggat
gagaaccaggcccagtggttcaccatagacccagtaacagggatcatcaccacactctcc
cagctggattacgagtctcagcccaggccgaatgtgacagtggtggctacagacagaggg
aggccttccctgtcctccacagctctggtccatgtggtgctgcaggatattaacgacaat
gaacctgtgttcggtaccaacttctacaacgtatcgatcaaggagaacacggccgctggg
acctgcatcctagaggtaggacattgtctattcagttctagtcaacctgtcgacaggtga

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