Oncorhynchus mykiss (rainbow trout): 110503839
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Entry
110503839 CDS
T07259
Name
(RefSeq) protocadherin-16
KO
K16507
protocadherin-16/23
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110503839
Cell adhesion molecules [BR:
omy04515
]
Cadherins
Cadherin related
110503839
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
RET_CLD1
Cadherin_pro
Motif
Other DBs
NCBI-GeneID:
110503839
NCBI-ProteinID:
XP_021438068
LinkDB
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Position
24:complement(15415537..15443172)
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AA seq
619 aa
AA seq
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MKTEAKGLGRSVSRSLQDEGRWSRGVLLLAYIVLELITVHSSTVLGNLELQLDEEQPAGT
IVGDISAGLPPGVTANLYFISDHEGTGVGSDLDIDESTGIIKTAKVLDHELRDRYNFIAV
TMTGVTVEVTITVNDINDHAPTFPRRRATFKIPEMTAVGTRFPLEPAVDGDKGQLTTQGY
LIKDGNPGQAFFLETRRGSNQVLYLDLVVNTLLDSETRPSYTLSLEAFDGGSPKRTGQMV
LDVTVQDINDNAPVFNQSRYHAIISENLQPGSNILQVFASDVDQGDNGLVLYEINRRQSD
PESYFVIDSRTGVITLNKPLDFEMRRVHELVVQARDNATQPEVTNAFVTIHVRDYNDNQP
TMTIIFLSEDGSPQISEGAQPGQYVARISVTDPDYGEYANVNVSLEGGDGKFALTTKDNI
IYLMCVDQILDREERDTYELRVMATDAGTPPLRAESSFTIQVTDVNDNPPLFDQQQYRQV
IPEVVFPGSFVLQVTARDKDQGPNGDITYSLLQDGKAGQDENQAQWFTIDPVTGIITTLS
QLDYESQPRPNVTVVATDRGRPSLSSTALVHVVLQDINDNEPVFGTNFYNVSIKENTAAG
TCILEVGHCLFSSSQPVDR
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccgaggccaagggtttggggcggtctgtgtcgaggtcgctgcaggatgagggc
cggtggagccgaggggtcctgctgctggcctacatcgtcctggagctgatcaccgtccac
tcctccaccgtcctggggaacctggagctccagttggacgaggaacagccagctgggacc
atcgtaggagacatcagcgctgggttaccgcctggtgtcaccgcaaatctttacttcatt
tcagatcacgagggcaccggggtggggagtgacctggacatagatgaaagcacgggcatc
atcaagacagccaaggtgttggaccatgagctgagggaccgatacaacttcattgcagtg
actatgacaggtgtgaccgttgaagtgaccatcacagtgaatgacatcaatgaccatgct
cctacattcccccggaggagagcgacgttcaaaatcccggagatgacagcggtgggaacc
aggttccccctagagccggcggtggacggggacaaaggccaactgactacccagggatac
ctcatcaaagatgggaaccccggccaggctttcttcctggagacccggagaggatccaac
caggttctctatctggacctagtggtcaacactcttctggacagcgagaccagaccgtct
tatacgctatccttggaggcgttcgatggaggctcccctaagaggactggtcagatggtg
ctagatgtgacggttcaggatatcaacgacaatgctccagtcttcaaccagagtcgctac
cacgccattatctcagagaatctgcagccgggtagcaacatcctccaagtctttgcctct
gacgtcgaccagggagacaacggtctggttctgtatgagatcaaccgcaggcagagcgac
ccggagagctacttcgtcattgactctcgtacgggtgtcatcacgctcaacaagcctctg
gactttgagatgcggagggtccacgagcttgtggtccaggcaagggataacgccacgcag
cccgaggttaccaatgccttcgtcacaatccacgtacgggactacaatgacaaccagccc
accatgaccatcatcttcctcagcgaagacggctccccacagatctccgagggtgcccag
cctggccagtatgtcgcccgcatctccgtcaccgacccagactacggagaatacgccaat
gtcaacgtctccttggaaggaggggacgggaagtttgccctgaccaccaaggacaacatc
atctacctgatgtgtgtggaccagatcctagaccgagaggagagggacacatacgaactc
agggtgatggctacagacgcaggcacccctcctctcagggctgagtcctcctttacgata
caagtcactgacgtcaatgacaaccctcctctgtttgatcagcagcagtacagacaggtc
atacctgaggtggtgttcccagggagcttcgtgttgcaggtcacggctagagacaaagac
caggggcccaatggagacatcacatacagcctcctccaggatggcaaggccggccaggat
gagaaccaggcccagtggttcaccatagacccagtaacagggatcatcaccacactctcc
cagctggattacgagtctcagcccaggccgaatgtgacagtggtggctacagacagaggg
aggccttccctgtcctccacagctctggtccatgtggtgctgcaggatattaacgacaat
gaacctgtgttcggtaccaacttctacaacgtatcgatcaaggagaacacggccgctggg
acctgcatcctagaggtaggacattgtctattcagttctagtcaacctgtcgacaggtga
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