Oncorhynchus mykiss (rainbow trout): 110503864
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Entry
110503864 CDS
T07259
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110503864
Membrane trafficking [BR:
omy04131
]
Protein recycling
Others
EARP complex
110503864
Endosome - Golgi transport
Tethering complex
GARP complex
110503864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
hAT-like_RNase-H
FBF1
Laminin_II
PsaD
NBD94
Motif
Other DBs
NCBI-GeneID:
110503864
NCBI-ProteinID:
XP_036817038
Ensembl:
ENSOMYG00000022292
UniProt:
A0A8C7R7V8
LinkDB
All DBs
Position
24:complement(16559760..16591432)
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AA seq
831 aa
AA seq
DB search
MMMEEEELEFSEDLEAILNLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLA
NIDDVVNKIRLKIRRLDDNIRMVVRGQTNVGQDGRQALAEAQVAIGQLFGKIKDIKDKAE
KSEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQ
GVVNVLEHFHKYMGIPQIRQLSERVKAAQSELGTQIMADFEEAFPAQGSKRAGGPSNVLR
DACLVANVLDPRIKQEIIKKFIRQHLSEYMVLFQENQDVAWLDKIDRRYAWIKRQLVDYE
EKYGRMFPEEWCMTERIAVEFCHITRTELAKVMRTRAKEIEVKLLLFAIQRTTNFEGLLA
KRFSGCTLTDVPGVKKPEPPLESTNPFLEDEVGDDGSEIEEDLDRPKKHKAPDNPFHGII
SKCFEPHLYVYIESQDKNLGEMIDRFVSDFRAQGPPKAGTEDGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTSSNSGGLTIKSLLQEKEGSEA
AKFNVEELCLICSILSTAEYCLATTQQLEEKLKEKVDKTLVERINLTGEMDTFSNVISNS
IQLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSVIMHIKQNVPIIRGNLASTRK
YFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVVRKA
PASYTKIVVKGMTRAEMILKVVMAPHEPSVVFVDNYIKLLADGNPETFQKTLDMKGLKRS
EQSSMLELFRQRLPTPPSGADGGPSLSFSTPTPEQENSRIRKLEKLIKKRL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggaggaggaagaattggaattttcggaggatttggaggctattttgaatctt
actccagaggtgcagttggccatcgagcaggttttccccagtcaagacccattggacaga
gcagattttaatgctgtggaatacatcaatacattgtttcccactgagcagtcactggca
aatatagatgatgtggtcaacaagatccgtctgaagattcggcgtctggatgacaacatc
aggatggtggtgagaggtcagaccaatgtgggccaggatggcagacaggcactggcagag
gcccaggtagccatcggccagctctttggcaaaatcaaagacattaaggacaaggctgag
aaatccgagcaaatggtcaaagagataacgcgggacatcaaacagctggaccatgctaag
cgtcacctgaccacctccatcaccaccctcaaccacctgcacatgctggccgggggcgtt
gactctctagaggccatgacgaggaggaggcagtatggcgaggtggctaacctgctacag
ggggtggtcaacgtgctggaacacttccacaaatacatgggcatccctcagatcagacag
ctctcagagagggtgaaagcagcccaaagtgagctggggactcagatcatggcagacttc
gaagaggccttccccgctcaggggtcaaagagagcagggggacccagtaacgttctgagg
gatgcctgtctggtggccaacgtcttggaccctcgcatcaaacaggagatcatcaagaag
ttcatcagacagcacctctctgagtacatggtgctcttccaggagaaccaggacgtagct
tggctggataagatcgaccggcgctacgcctggattaagcgtcagctggtggactatgag
gagaagtacggacgcatgtttcctgaagagtggtgtatgaccgaacgcatcgctgtagag
ttctgccacatcaccaggacagagctggccaaagtaatgcggacgagggccaaagagatt
gaggtcaagctgcttctgtttgccattcagaggaccaccaacttcgaggggctgctcgcc
aagcgcttctctgggtgcaccctcaccgacgtgcccggggtgaaaaagcctgagccacca
ctggagtccaccaaccctttcctggaggacgaggttggagatgatggttcagagatagag
gaggatctggataggcccaagaagcacaaggctcctgacaaccccttccatggcattatt
tccaagtgctttgagcctcacctctatgtctacatcgagtctcaggacaagaacctgggg
gagatgattgaccgttttgtgtcagacttccgggcgcagggcccccccaaggcgggcaca
gaggacgggggagcagtgctgcccagctgtgctgacctgtttgtctactataagaagtgc
atggtgcagtgctcccagctcagcacaggggaacctatgatcgccctcaccaccatcttc
cagaagtacctcagagagtatgcctggaagatactgtctggaaacctgcccaagactagc
agtaatagtggaggactgaccatcaagagtctactgcaggagaaggagggttcggaggct
gctaagttcaatgtagaggagctgtgtctcatctgtagcatcctcagtactgcagagtac
tgtctagccaccacacagcagttggaggagaagctgaaggagaaggtggataagactcta
gtggagagaatcaacctgactggagagatggacaccttcagcaatgtgatttccaacagt
atccagttgcttgttcaggacctggacgctgcctgtgatcctgctctcactgccatgagc
aagatgccatggcagagtgtagagcatgtaggtgaccaaagtccctacgtgacgtcagtc
atcatgcacatcaaacagaacgtccccatcatcagagggaacctggcctccacacgaaaa
tacttcacccagttctgcatcaagttcaccaactcttttattcctaaattcatcaaccac
ttgttcaggtgtaagcctatcagcatggtgggggctgaacagctcctcctggacacccac
tccctgaagacagtgttgttggatctgccctctatagggtctcaggtggtccgcaaggcc
ccagccagctacaccaagatagtcgtgaaggggatgacccgcgctgagatgatcctcaag
gtggtcatggccccccatgaaccctccgtggtgtttgtggataactacatcaagctcctc
gctgatggaaacccagagaccttccagaaaactctggatatgaaggggttgaagcgcagt
gagcagagcagcatgttggaactcttcagacagaggttacccactccaccctcaggggcc
gatggaggcccctctctctccttcagcacccccacccccgagcaggagaactcgcgcata
cgcaaactggagaagctcatcaaaaagagactatga
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