Oncorhynchus mykiss (rainbow trout): 110503923
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Entry
110503923 CDS
T07259
Name
(RefSeq) serine/arginine-rich splicing factor 1B isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110503923
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110503923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110503923
Spliceosome [BR:
omy03041
]
Common components
Common spliceosomal components
SR proteins
110503923
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
110503923
NCBI-ProteinID:
XP_021438248
Ensembl:
ENSOMYG00000016293
UniProt:
A0A8C7QEF9
LinkDB
All DBs
Position
24:complement(18437538..18447553)
Genome browser
AA seq
256 aa
AA seq
DB search
MSGGVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFIEF
EDPRDADDAVYGRDGYDYDGYRLRVEFPRSGRGGGRGGFGGGGGGGGGVGGAPRGRYGPP
SRRSEYRVIVSGLPQSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKL
DNTKFRSHEGETAYVRVKVDGPRSPSYGRSRSRSRSRSRSRSAASRSRSNSRGGGTRGGR
GSPRYSPRHSRSRSRS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaggcgtcgtgcgaggccccgcaggaaataacgattgtcgaatttatgtcgga
aatctacctcctgatattcgcactaaagatgtcgaggacgtgttctacaaatacggagct
attcgagacatcgatttgaaaaatcggagagggggacctccctttgccttcatcgaattt
gaagatcccagggacgcagacgatgcagtgtacggacgagacggctatgactacgacggt
tatcggctgcgagttgaattccctcggagcggaaggggtggggggcgaggcggttttggt
ggaggtggtggtggtggtgggggcgttggtggcgctcctagaggcagatacgggccgcca
tccagacgctccgagtatagggtcattgtctcagggcttccccagagtggcagctggcag
gacctcaaggatcacatgcgtgaggctggggatgtatgttatgctgacgttttcagagat
ggaactggggttgtggagtttgtgcgcaaagaagacatgacctacgctgttcgaaagctg
gacaacaccaagttccgatcacacgagggagagaccgcatacgttcgcgtgaaagtagat
ggtccccgcagcccgagctatggaagatcccgttccaggagccgcagtcgaagcaggagc
cgcagcgcagccagtcgcagccgcagcaactctcgcggtggtggtacccgtggtggcaga
ggatctcctcgctactctccacgccatagccgctctcgctcccgttcctaa
DBGET
integrated database retrieval system
