Oncorhynchus mykiss (rainbow trout): 110503994
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Entry
110503994 CDS
T07259
Symbol
atm
Name
(RefSeq) serine-protein kinase ATM isoform X1
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03440
Homologous recombination
omy04068
FoxO signaling pathway
omy04110
Cell cycle
omy04115
p53 signaling pathway
omy04210
Apoptosis
omy04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110503994 (atm)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
110503994 (atm)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
110503994 (atm)
04210 Apoptosis
110503994 (atm)
04115 p53 signaling pathway
110503994 (atm)
04218 Cellular senescence
110503994 (atm)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
omy01001
]
110503994 (atm)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
omy03032
]
110503994 (atm)
03036 Chromosome and associated proteins [BR:
omy03036
]
110503994 (atm)
03400 DNA repair and recombination proteins [BR:
omy03400
]
110503994 (atm)
Enzymes [BR:
omy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
110503994 (atm)
Protein kinases [BR:
omy01001
]
Serine/threonine kinases: Other
PIKK family [OT]
110503994 (atm)
DNA replication proteins [BR:
omy03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
110503994 (atm)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
110503994 (atm)
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
Check point factors
Other check point factors
110503994 (atm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI3_PI4_kinase
FAT
TAN
FATC
HEAT
HEAT_ATR
Motif
Other DBs
NCBI-GeneID:
110503994
NCBI-ProteinID:
XP_036817020
Ensembl:
ENSOMYG00000034525
LinkDB
All DBs
Position
24:21151903..21194602
Genome browser
AA seq
3085 aa
AA seq
DB search
MSLVLHELLVCCRGLENDKATERKKEADRFRQLIRSPDTVEELDRISGTRAAKSSKQLTW
NAVFRFLQKYLQKETELLQSGKANVSATTQANRQKKMQEISSLVKYFIRCANKRGPRLNC
GELLNHVMEVLRSSFSCSAYGEDYSSILLKNILSVRKYWCDITQQQWHNLLDLYCGLFTG
SSKAINRVLVSRIIHTAVQGCCLQTEGFSHTLFSFFSRALLNARQERHLAVVEHLVSALN
VFLRSAAMNCRIRVCRLGEELLPSVLYVWTQMRPSTTLKEEIVEFFNLQLCVHHPKGSKT
QDTGAYAEDWVKWQSLLYNLYDALVSEISQIGSRGKYATGSRHIAVKENLMELTAEICHQ
LFSEDCNFQMLEVTQAHLRATQRGSPHGTPSKRRRIDLGWEVLRDHLQPHQSDFDVIPWL
QITSVLTSKYPSMVPGQELVPLLSVLCQLLGEQRRGDRGPYVLRCLREVARCQATHPERA
QSYRAELGRLWGRVWALALRGVSSPQTEALSLALLSTILQGAFIPIDRELWKLFSGSACK
PSDAAALCLAQALLKCPVLKSLGTGWDHAGAVEGVGPPSLKENIMSWLLMNEQSEEAEES
SRPHPIICRDFPHNLIPRILVPLTLKDTRAGIMFLLGAKGLESAVMQERVKGSLSEIESM
YLQFSFDEMPSNPMVKVMVSSAGTQLTVVPSLKHKLEQGLLSVADHLLNCYSPDSQTTPP
ECLVRCSSLLTGVLAGYVSTGLLTEEEACHSQLFLKAKALVQDFSEYISNVKVKMAEDGT
MTTLRSVMRLCTQCVNRGVKDSMSSVSCNLFMKIFPARLLTELAEICKLLLNSSCKRGSV
GIEEETTDEDWDMTRTQADQQEDIDLFDDGDGPQTSTSKGTHRQNVDPDDTQCGFDAKSL
LAEEHLAQQDLAILASLEFLSLCVSAKFIHGLSFKPVEVRRRLLLLLEQIDCTKPLHLNM
YLVLLKKLPAEDTSLAAEEFDSLLRPLADLCSLYRQDQEVCAAVLLGLLPSIRSLGRTQD
QHNDMRHVQGALLQVVSGFCILGRTGKCTAIVKVALIHCLLALLEADPCCKWAVLTLREE
ELPVSVILPSYLSDSHHHVRMLAAMTVERLFLEMTPDSLEKRKMLPLKCQQTAFENVYLK
AQEGMRLQKNSSPEDLSDETFNRKATLLKSVSVVLCCSPVCEKQSLFALFQSYKENNIEE
PLIKKVLGSVSRALGYRSVEGFVSSHLDYLVAEWLGQHGYTLESFPYTLLNHATLKDFYS
SSYQVLIPHLVFLDDFKQVKSISTLLGKDWKKLLANCFPKIMVNILPYFAMSGQDAQVAR
QREKAHRVYDLLKDSNCLGKPQIDSLIHSNLSDIVVELLMTLYEGAATEEGGRGDLRRFI
GELDPAPNPPYFNSYVIKATLDYLSSCHSANLKSLVAILSKTPISIQRILLAVCQKAAET
INAYERHRILLMYHLFVSLLLKEVKDGLGGAWAFVLRDIIYTLIHHINSRPAQLDEVSSR
SFSLCCDLLTSVCRTAVQFCDDAVESHLQVIVGTLTAQVTTQLAISQQVLSLLKFLVVES
QDKLKSAIQKLEPFPDRPEFRELRAVQHTLKYSTGKFTLRQEIAHFLSVASCDSLPLTRL
EGLKDLRRQLHNNKSQIRPLLRECLADPAESVLVLLVLNLLQLCKLAANHPGGRDILEAA
GSCLGELGPVDFSTIALLHGKDQLNARAVSLFPSVEPQWLYITLNCINNALTHHCIEVRQ
AAVQSLKDILATQAGADFWEIHKDNRDPMLAYLNPFRSTKKKVVEMSEEVSLVARERLES
QDLWVPEAGGHKAWLKMLCIVLLDSGGVRSETLLLSRPLCLVKTDFCQRVLPLIIHDILL
GDSDGSWRKLLSTHIQDFFTSCFSRAWASSRSTTPLLSDSAGESDISNQGPLDKASLRTM
LSVINYLRQQQRPLGSDSNLCGTVCHSNFWLELNYLEVARAAQSCSAHFTALLYSEIYVD
KIKTNMEENRRNPSRASRRITFDESSQNFTISSLSEESVKDTGISLQDLLIEVYRSIGEP
DSLYGCEGGKMTSALTRIRTYEHEAMWGKALTSYDLHSNLPDGTRQVGIVEGLQNIGLSS
ILATYLRGLESEGVEWGAELRELRFQAAWRNMQWDCDLSERNEKLNPGFNESVFCSLQAL
RDKEFSTFDQTLKYARGNEVEELCKGSLEAVSSLYPALRNLQRISELESIRQLFSKPLTD
VGLAEVCSHWQQHSQLLVDSDFTLVEPILALRSVAQETLISQERDPEKNKYLSTVLTSHL
MELCQLARAAGNTQLAERAVFQMKQHGGGGGRGSTASSWQLEEAQVFWAKGEQGLALGLL
RQMIHTLEEQVNVNPALVPVFTECLRLCGNWLAETCLESPGVILEKYLERAVVVIEGHAI
GSDTKLQSQRTQAFLSLARFSDAQYQGIDNYMKSSEFENKQALLEKAKEEVDLMRERKVG
TNRYTVKVQRELELDERALSNLQADRRRFLCKAVENYIHCLEQGEEHDTWVFRLASLWLE
NADVKTVNDMMKGGVNRIPSYKFLPLMYQLAARMGTKMSATVAEDVGFYGVLNELICLSC
LEHPHHTLFIILALVNANKDESFSRSRLSKSTPRHSSQLDLERSEVAQSIMNKIRKKRAQ
MIRGIEVLCDAYITLAYMDASRHKTEKKAILIPSDQPIMQIKNLDDVIIPTMEIKVDPSG
KYDNLVTIKSFKPHFHLAGGVNLPKIIDCVGSDGKIRRQLVKGQDDLRQDAVMQQVFHMC
SMLLQRNTETRKRKLNIRRYKVVPFSQRSGVLEWCSGTVPIGDFLIDPQKGAHTRFCPQD
WTSITCRKKMMESQRLGSGGKTQAFSEVCQNFRPVFRYFCMERFLDPAVWLEKRLAYTRS
VATSSIVGYIVGLGDRHIQNILIDEQTAELVHIDLGVAFEQGKILPTPETVPFRLSRDIV
DGMGITGVEGVFRRCCEKTMEVMRSSQEALLTIVEVLLYDPLFDWTMNPLKAFYLQQQHD
EQAELQSTLNSTLGGDILEAHRKSSSDSQSFNKVAERVLLRLQEKLKGVEDGRVLSVGGQ
VNLLIQQAMDPNNLSRLFPGWQAWV
NT seq
9258 nt
NT seq
+upstream
nt +downstream
nt
atgagcttggtccttcacgagctgcttgtctgctgcagaggtttagagaatgacaaagca
acggagagaaagaaagaggctgatcgcttcagacagctcatccggtctcctgacacagtg
gaggagctggatcgcatttctggaaccagagctgctaaaagttccaagcagctcacctgg
aatgcagtcttcaggtttctgcagaagtatctgcagaaagagactgagctgctccagtca
gggaaagccaacgtgtcagccaccacacaggccaaccgtcagaagaagatgcaggagatc
agcagcctggtcaaatacttcatccgctgtgccaacaagagagggcctcggctgaattgt
ggcgagctcctgaatcatgtgatggaggtgctgcggagctcattcagctgctcggcctat
ggggaggactacagcagcatcctgctcaagaacatcctgtctgtccgcaagtactggtgt
gacatcacccagcagcagtggcacaatttgctggatctgtattgtggccttttcactggt
tcctccaaggccataaatcgtgtgcttgtgagcaggatcatccacactgcagtccagggc
tgctgtctgcagactgagggcttcagccatacactcttcagcttcttctccagagcactg
ctcaatgccaggcaggagagacacttggcagtggtggagcacttggtctctgctctgaac
gtcttcttgaggtctgctgccatgaactgccgtataagggtgtgtcggctgggtgaggag
ctcctgccctctgtgctctatgtgtggacacagatgaggcccagcaccactctcaaagag
gagatagtagagttcttcaacctgcagctctgtgtacatcatcctaaaggatcaaagaca
caagacacgggagcctacgctgaggactgggtcaaatggcagagtctactctataacctg
tatgatgccctggtgagtgagatcagccagattgggagccgggggaaatatgccacaggg
tcgcgccatatcgctgtgaaggagaaccttatggagctgactgcagaaatctgccatcag
ctctttagcgaggattgtaacttccagatgctggaggtgactcaggcccacctcagagcc
acccagagaggcagtccacacggcacgcccagcaagcgtagacgcattgacttgggctgg
gaggttctccgagaccacctgcagccacaccagagtgactttgacgtcataccatggtta
cagatcacatcggtgttgacctctaagtacccctccatggtgcctggccaggagctggtt
cctctgctatccgtcctttgccagctgctgggggagcagcggcggggtgacagggggccc
tacgtgctgcgctgcctgagggaggtggctcgctgccaggccacacacccagagagggcc
caatcctacagggctgaactgggcaggctgtggggccgtgtctgggccctggctctacgg
ggggtcagctccccccagactgaggccctcagtctggccctgctgtccaccatcctccag
ggagccttcattcccattgacagagagctttggaagctcttctctggctcggcctgcaag
ccctctgatgctgctgctctgtgtttggcccaggccctcctcaagtgtcctgttcttaag
agcctgggcactgggtgggaccatgcaggggccgtggagggggtcgggccacccagcctc
aaggagaacatcatgagctggctgctgatgaatgaacagagtgaagaggcagaggagagc
tcaagaccacaccccatcatctgcagggattttcctcataacctcatccccagaatcctt
gtgcctttgaccctcaaagacacccgagctggcattatgtttctccttggagcaaaggga
cttgagagtgctgtgatgcaagagcgagttaaaggttccctgagtgagattgagagcatg
tacctgcagttcagctttgacgagatgccctctaatcccatggtgaaagtgatggtgtcc
tcagccggcacccagctcactgttgtccccagccttaaacacaagctggagcagggcctc
ttgtctgtggctgaccacctactaaactgctactccccagattctcagaccacaccacca
gaatgcctggttcgttgttcaagtctccttactggcgttttagcaggatatgtctctact
ggtctcctgactgaggaagaagcctgccattcccaactcttcctaaaggccaaggcactg
gtacaggattttagtgagtacatatctaatgtgaaggtgaagatggcagaggatgggaca
atgaccacactcaggtctgtcatgcggctgtgcacacagtgtgtcaacagaggggttaag
gacagtatgagctctgtctcttgcaacttgttcatgaagattttccctgcgagacttttg
actgaactggcagaaatatgcaaactgttgctgaacagctcctgtaagagaggtagtgtg
gggattgaggaggagaccacagatgaggactgggacatgacgaggacacaggctgaccag
caggaggatattgacctgtttgatgatggagacggaccacagaccagcacatctaagggg
actcacagacagaatgtggaccccgatgacacccagtgtggttttgatgctaaaagccta
ctggctgaggagcatttggcccagcaggatttagccatcttggccagtctagagttcctg
tccctgtgtgtatcggctaagtttatccacgggctctctttcaaaccagtggaggttcgc
cgcaggttactactgctgctggagcagatagactgcaccaagccactacacctcaacatg
tacctggtccttctgaagaaactacctgctgaggacacatcgctggcagctgaagagttt
gactcactcctcagacctctggcggatctttgctcattgtaccgccaggaccaggaggtc
tgtgctgcagtgctgctgggtctgctaccgtctatccgtagtctgggccgtacccaggac
cagcacaatgacatgagacacgtccagggagctctgctccaagtggtctctggattctgc
attttgggcagaacggggaaatgcacagcaattgtaaaggtggcattaattcactgtcta
ctggctctactggaggctgacccttgctgtaagtgggcggtccttaccctgagggaggag
gagcttccagtgtccgtcatcctcccgtcctacctgtccgactctcaccatcatgtacga
atgcttgcagccatgacagtggaaaggctgtttttggagatgacaccggacagcttggag
aagagaaagatgcttcctctgaaatgccagcagacagcctttgagaacgtctacctgaaa
gcccaagaagggatgaggctccagaagaacagctctcctgaagacctgagtgacgagacc
tttaaccgcaaggccacgctgctgaagagtgtgtcggtggtgctgtgctgcagccccgtc
tgtgagaaacagtctctcttcgccctcttccagtcctacaaggagaacaacatagaggag
ccactcatcaaaaaggtcctgggcagtgtgtccagagctctgggctacaggagtgtggag
gggtttgtcagctctcacctggattacctggtggcagagtggctgggccagcatggctac
actctggagtccttcccttacactctgctcaaccacgccactctcaaggacttctacagc
tcctcctatcaggtccttatcccacacctggtcttcctggatgactttaagcaggtgaag
tccatcagcaccctcctgggtaaggactggaagaagctgctggccaactgcttccctaag
atcatggttaacatcctgccctactttgccatgtcgggccaggatgcccaagtggcccgg
cagagagagaaggcccacagggtctatgacctactcaaggacagcaactgcctgggcaaa
ccgcaaatcgacagcctgattcacagtaacctgtcagacattgtggtggagctgttgatg
accctgtatgaaggggctgctactgaggaggggggcagaggggacttgagaaggttcata
ggggaactggacccagccccaaacccaccctatttcaactcctatgtcataaaagccaca
ctggactatctcagctcgtgtcacagtgccaatctcaagtccctggtggccattttatcc
aagactccgatctccatccagaggatcctactggcggtgtgtcagaaggcagctgagacg
ataaatgcctacgagaggcaccgcatcctgctgatgtaccacctgtttgtcagcctgctg
ctcaaggaggtcaaggacggcctggggggagcctgggccttcgtcctccgagacataatt
tacacactcatccaccacatcaacagcaggccggcccagttggacgaggtgtccagccgt
agtttctccctgtgttgtgacctactgacctctgtgtgtcgcacggccgtgcaattctgt
gacgatgctgtggagagccatctacaggttatcgttggtactctcactgcccaggtgaca
acccaacttgctatctcacagcaggtgctcagtctgttgaagttcctggtcgtagagagt
caggacaagctgaagagtgccatccagaagttagagcccttcccagaccgacctgagttc
agagagctgagggccgtgcagcacacactaaagtacagcacagggaaattcactctcaga
caggagatagcccacttcctgtctgtggcttcctgtgactccctgcctctgaccagactg
gaggggctgaaggacctgaggagacagctccacaacaacaagagccagattagaccgctg
ctgagagagtgcctcgcggaccctgcagagagtgtgttggtgctgctggtccttaaccta
ctacagctctgtaagctagcagccaatcaccctggaggaagagacatcttagaggctgca
gggagctgtctgggagagctggggcctgtggatttctccaccatcgctctgctccatggg
aaggaccagctcaatgccagagctgtatcactctttccttcagtggaaccacagtggctc
tacatcaccctgaactgcatcaacaacgccctcacacaccactgtattgaggtgaggcaa
gctgctgtccagagtctgaaggacatcttggccactcaggctggagctgacttctgggag
atccataaagacaaccgtgaccccatgctggcttacctcaacccttttaggtctaccaag
aagaaggtggtcgagatgagtgaggaggtgagcttggtggctagggagcggctggagagc
caggacctgtgggtgcctgaggctggcggccataaggcctggttgaagatgctctgcata
gttctgctggacagtggaggggtcaggagtgaaactctgctgctttcccggccactgtgt
ctggtgaaaacagacttctgccagagggtgctgccgctcatcatccatgacatcctgctg
ggggactctgacggctcctggaggaagctcctctccacacacatccaggactttttcacc
agctgtttcagtcgtgcctgggcctctagccgctccaccactcctctcctctcagactct
gcaggagagtcggacatttccaaccagggtccgttggataaggcctctctgcgcaccatg
ctctctgtcattaactatctgaggcagcaacaaagacctctaggatctgatagtaacttg
tgtggtacggtgtgccactctaacttctggttggagctgaactacctggaggtggccagg
gcagcccagtcctgctcagcccacttcacagccctgctctactctgagatctacgtggac
aagatcaagactaacatggaggagaaccgcagaaatccgtccagagcgtcgcgcagaatc
acatttgatgagagcagtcagaacttcaccatctccagtctgtcagaggagagtgtcaaa
gacactggtatcagtctacaggacctactgattgaggtgtatcgtagtattggggagcca
gacagtctgtatgggtgtgaaggtgggaagatgaccagcgctctcaccaggattcggacc
tatgagcatgaggcgatgtggggaaaggctctgacctcctacgacctccactccaatctt
cctgatggcacacggcaagtgggcattgtggagggtctgcagaacattggtctgagcagt
atcctggccacctacctgcggggtctggagagtgagggggtggagtggggggcggagcta
agggagctaaggtttcaggcagcctggaggaacatgcagtgggactgtgacctatcagag
aggaatgagaaattgaaccctggcttcaacgagtcagtgttctgctccttgcaggctttg
agagacaaagagttttccacattcgaccaaactcttaaatatgccaggggcaatgaggtg
gaggaactgtgcaaaggcagtctggaggcagtgtcctctctctaccctgctctacggaac
ctccagaggatcagtgagctggagagcatccgacaactcttctccaagcccctgaccgac
gtaggcctggccgaggtgtgttcccattggcagcagcactcccagctgctggtggacagt
gactttacgctggtggagcccatcctggccctgcgctctgtggcccaggagaccctaatc
tcccaggagagagaccctgaaaagaacaagtacctcagcactgtcctcacctcccacctc
atggagctctgccaactggcccgcgccgcaggaaacacacagctggcagagcgggcggtt
ttccagatgaagcagcatggcggaggaggggggcggggctccacagcgtcgtcatggcag
ctggaggaggcccaggtgttttgggcgaagggagagcagggtcttgctctggggctactg
agacagatgatccacactctggaggagcaggttaacgttaaccctgccctggtgccggtg
ttcacggagtgcttgaggctgtgtgggaactggctggcagagacgtgcctggagagccct
ggggtcatcctggagaagtacctggagagggcagtggttgtgatcgagggccatgcgata
ggttcagacaccaagctgcagagccagaggacgcaggccttcctgtccctggctaggttc
tcagatgcccagtaccagggcattgataactacatgaagtcatctgagtttgagaacaaa
caggctctgctggagaaggccaaggaggaggtggacttgatgagggagcgcaaggtcggc
accaacaggtacacagtgaaggtgcagagggagttggagctggatgagagggctctgtcc
aacctgcaggctgacagaaggaggttcctgtgtaaggctgtggagaactacatccattgt
ctggagcagggtgaggagcacgacacctgggtgttccgcctggcctcactgtggctggag
aacgctgacgtcaagacagtcaatgacatgatgaagggaggtgtaaacaggatcccgtcc
tataagtttctgcctctcatgtaccagttggctgcccgcatggggaccaaaatgtccgct
acagtggcagaggatgtgggcttctatggtgttctcaatgagctgatctgcctgtcgtgt
ctggagcaccctcaccacaccctcttcatcatcctggctctggtcaacgctaacaaggac
gagagcttctcccgcagccgcctgtccaagagcaccccgcgccattcctcccaactggac
ctggagcggtctgaggtggcccagagtataatgaacaagatcaggaagaagagagcccag
atgatcagaggcatagaggtcctctgtgatgcctacatcactctggcctacatggacgcc
agtcgacacaagacagagaaaaaagccatcctcatcccctctgaccagcccatcatgcag
ataaagaacctagatgatgtcatcattcctacaatggagatcaaggtggacccctcgggt
aaatatgacaacctggtgaccatcaagtccttcaagcctcactttcacctggccggaggg
gtcaacctgcccaagatcattgactgtgtgggatcagacgggaagatcagacgacaactg
gtcaagggccaggatgacctgcggcaggatgctgtaatgcagcaggtgttccacatgtgt
tctatgctgctgcagcgcaacactgagacacgcaagaggaaactcaacatcagacgctac
aaggtggtgcccttctcccagcgtagtggggttctagagtggtgctcggggaccgtccct
ataggagatttcctcatagacccccaaaagggcgctcacacacgcttctgcccccaagac
tggaccagcataacctgccggaaaaagatgatggagtctcagaggcttggttccggtggg
aagacccaggctttcagtgaggtgtgtcagaacttccggcctgtcttccggtacttctgc
atggagcgattcctggacccggcagtgtggctggaaaaacggctggcctacactcgcagt
gtggccacttcctccatcgtgggctacattgttggactgggggataggcacattcagaac
atccttatagacgaacagacagctgaactggtgcatattgatttgggtgtagcgtttgaa
cagggcaagattctcccaactcctgagactgttcccttcaggctatccagagatattgtg
gatgggatgggcataacgggggtggagggcgttttcagaagatgctgtgagaagaccatg
gaggtcatgaggagttctcaagaggccttgctgactattgtagaggtactgctgtacgac
cctctgtttgactggaccatgaaccctctcaaggccttctacctgcagcagcagcatgat
gagcaggctgagctccagtccacgctcaactctacactggggggagacatcttggaggcc
caccgcaagtccagcagtgatagccagagcttcaacaaggtggcggagcgcgtgctgctg
cggctgcaggagaagctgaagggggtggaggatggcagggtgctcagtgtaggagggcag
gtcaacctcctcatccagcaggccatggaccctaataatctcagccgcctcttccccggc
tggcaggcctgggtctag
DBGET
integrated database retrieval system
