Oncorhynchus mykiss (rainbow trout): 110503997
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Entry
110503997 CDS
T07259
Symbol
dscamb
Name
(RefSeq) Down syndrome cell adhesion molecule homolog isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110503997 (dscamb)
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
DSCAM family
110503997 (dscamb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Ig_5
Pur_ac_phosph_N
C1-set
V-set_CD47
C2-set_3
Interfer-bind
fn3_2
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
110503997
NCBI-ProteinID:
XP_036817141
Ensembl:
ENSOMYG00000034752
LinkDB
All DBs
Position
24:21229469..21356455
Genome browser
AA seq
2066 aa
AA seq
DB search
MWILAVIFFQSILNVFSEDLRSSLYFVNASLQEVVFASTTGTLVPCPAAGVPPASLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFNFLPSSFSKLIHDNTYYCTAENPSGKIRSQDVHIKA
VFREPYTVRVEDQKAMRGNVAVFKCIIPASVEAYVTVVSWEKDTVSLSSGPRFLITTTGA
LYILDVQNEDGLYNYRCTTRHRYTGETRQSNSARLFVSDPTNSEPGILDGFDRREVMASH
RVELPCKASGHPMPKYRWLKDNSPLEPDTRFRQSVTGLLIESAQPTDSGTYVCEVWNSYG
NAEVVGRLMVKQPLKAVVSPRKVKGSVGSKVSLHCSVSGSDEYELSWYRNGEIIYPGNNV
RITGISRENLIMEGMAKSDGGAYQCFARKNKMSAQDFVQVILEDGTPKILSSFSEKVVNP
NEPVFLVCNVKGTPPPSCTWNLDDDPVIKDSHHHPGHYETHEGHVVSQLNITHTKEVDGG
VYRCTCRNSAGAVYHQARINVRGAASIRPMKNITAIAGRDAYVHCRVIGYPYYSIKWYKN
SHLLPFNHRQRAFENNGTLKLSNVQELDQGEYNCRVLVKPHQETNQSVHLNVKVPPYIQP
FAFQRFSIGQRVFIPCVVMSGDQPLDITWQKDGRPIPASLGVTIDNIEFTSSLRISNLSP
DHNGNYTCIARNEAAAVEHQSQLIVRVPPQFVVQPTDQDGIYGKTVTLNCSAEGYPRPTL
VWKHSKGNGVPQFQPIALNSGSRIQLLVNGSLLIKHVLEEDSGYYLCKVSNDVGADVSKS
MYLTIKIPAMITSYPNTTMATVGQQKEMSCTAHGEKPIMVRWEKEERIINPETSRYTVVV
KEVADEVISTLKILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEVEIREVRDR
TIALRWTMGFDGNSPITGYDIECKNKSASWNSAQITKDVSPQLNQATIIELHPSSTYNIR
IFAKNNIGKSDTSNELTITTDEAAPDGPPQEVQLEATSPQSIKVTWKGPHKHLQNGVIRG
YQVGYREYSSGGSFQFNIISMDTTGESSESITLDNLRKFTEYGVVVQAANRAGTGPSSQE
VITKTLEDVPSRPPENVLAMAKSPEVISLSWLTLPKEALNGNLQGYRVIYWANLPDGELG
EIRNVTTSYPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKSA
AATSSVVFVSWLPPLKLNGIIRKYIVFCSNLHPTVMSEFEASPDVYFYRVPNLARNRKYS
IWVVAVTAAGRGNSSETITVEPRAKAPARILTFNGTVTTPWMKDIILPCKAVGDPPPTIK
WLKGNNGTPAPVLIDGRRSVHSNGSFIIRTVKAEDSGNYSCVASNNWGSDEITLNLQVQV
PPDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRL
ENLKCGTWYKFTLTAQNGVGPGRISEIIEAKTHGKEPQFAKEHELFASINSTRVRLNLIG
WNNGGCPITSFTLEYRPVDTAMWTMAQRTSLTKSYILYDLAEATWYELQMKVVNSAGFAE
KKITFATLNADGSTIPPLLKTVDPITDNMSGNEGLKMMVTITCILVAAVMVFILLMVLKR
RRREQRLKRLRDAKSLAEMLMSKNTRTPDTSNKQQAMRMHIDIPRAQLLIEERDTMETID
DRSTVLLTDNDFGETSKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTNPTARRTAKAG
PAASRNRYASQWTLNPPQPPTSSHTLSTDWRLPTPRATGSVDKESDSYSVSPSQDTGTGL
TLCLTYNISLQQRGDHYYCTWKGQSAHDRARSSMVSTESASSTYEELARAYEHAKMEEHL
RHAKFTITECFISDTSSEQMTAGTNDYTDSLTSSTPSESGICRFTASPPKPQDVSRVMNM
AAPKAHRPGGELVHLPPYLRMDFLLNRGSASGGRGSNGGNGGREGGGGETGALGQACLEP
QKSRTLKRPPLLEPTPMEVPTSREVQQWQPGTASTLPQREPTGREATGDLAQAPAAKLSS
SQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggctgttatctttttccagagcatcttaaatgtttttagtgaagatcta
cgttccagcttatattttgtcaatgcatctctgcaagaggtagtgtttgccagcaccaca
gggaccctggtgccctgtcccgctgcaggggtgccccccgcctcgctgcgctggtacctg
gccaccggagaggagatctacgatgtgcccgggatccgccacgtgcaccccaatggcacc
ctccagatctttaacttcctcccctccagctttagtaagctgatccatgacaatacctac
tattgcacagctgaaaatccttcagggaaaataagaagccaagatgtccacattaaggcc
gtatttcgggaaccctacacagtccgggtggaggaccagaaagccatgagaggcaatgta
gcggtcttcaagtgcattatccctgcctccgtggaggcttacgtcactgtcgtatcgtgg
gagaaagacacagtctcactatcctcaggacctagatttctcatcacaaccacaggagcc
ttgtatattctggacgtccagaatgaggatggattgtataactaccgctgcaccacacgg
catcgctacacgggcgagaccaggcaaagcaacagcgcccggctttttgtgtcagatccc
accaactcagagccggggattctggatggctttgaccgtcgggaggtcatggcgtcccat
cgggtggagctgccctgtaaggcgtcaggccatcccatgcccaagtaccgctggctgaag
gacaacagccccctggagcccgacacacgtttccgccagagtgtcacgggcctgctgata
gagagcgcccagcccaccgactctggcacctacgtgtgtgaagtgtggaacagctatggc
aacgctgaggtggtgggccggcttatggtcaagcagcccctgaaggcggtggtcagccca
cgaaaggtgaagggcagcgtgggtagtaaggtgtccttgcattgcagtgtcagtggctct
gatgagtatgagctgtcgtggtatcgtaacggagagatcatctaccctggcaacaacgtg
cggatcacaggcatcagcagggagaacctgatcatggagggcatggccaagagcgatggc
ggggcctaccaatgtttcgccaggaagaacaaaatgtctgctcaggattttgttcaggtc
attttggaggacggcactccgaagattctgtcctctttcagtgagaaggtggtcaacccc
aacgagccggtcttcttggtgtgtaacgtcaaaggcactccccctccctcctgcacctgg
aacctggacgatgacccggtcatcaaggacagtcaccaccaccctggccactacgagacc
cacgagggccacgtggtcagccagctgaacatcacccacaccaaggaggtggacggaggg
gtgtaccgctgcacctgcaggaactcggccggggcggtctaccaccaggctcgaataaac
gtaagaggggctgccagcatccgtccaatgaaaaacatcacagccatcgcagggcgggac
gcgtacgtccactgtcgcgtcattggctacccatactattccatcaagtggtataagaac
tcccacctgctcccctttaaccaccggcagcgggccttcgagaacaacggcactctgaag
ctgtccaacgtgcaggagctggaccagggagagtacaactgcagggtattggtcaaacct
catcaagagaccaatcagagcgtccatctcaatgtcaaagttccaccgtacatccagccc
tttgcattccagcggttctccattggtcaacgcgtcttcatcccctgcgtggtaatgtca
ggtgaccagcccctggacatcacctggcagaaggacgggcggccaatccctgccagtctg
ggggttaccatcgacaacatagagttcaccagctcactgcggatctccaacctgtcccca
gaccacaacggaaactacacctgcattgcacgcaacgaggctgcagccgttgagcaccag
agtcagctcattgtcagggttcctccccagtttgtggtgcagcccacagaccaggatggg
atctatggcaaaactgtgaccctcaactgctctgctgagggttatccacgccccaccctc
gtatggaaacactccaaaggtaacggggttccccagttccagcctatcgccctgaactct
ggctcccgtatccagctgctggtcaacggctctctgctcatcaaacacgtgctggaggag
gacagcggctactacctgtgtaaggtcagcaacgacgtgggagctgacgtcagcaaatcc
atgtacctcaccatcaaaattccggccatgatcacgtcgtaccccaacaccaccatggcc
acggtgggccagcagaaagagatgagctgcacggcccatggggagaagcccatcatggtg
cgctgggaaaaggaggaacgcatcatcaacccagagaccagccgctacaccgtcgtggtc
aaagaggtggctgacgaggtcatctccactctgaagattttgcccactgttcgggaagat
tctggattcttctcctgccatgccatcaactcctatggtgaagacagagggatcattcag
ttaacagtacaagaacctccggaccctcccgaggtggagatccgagaggtcagagaccgg
accattgccctccgctggaccatgggcttcgacggaaacagccccatcacaggatatgac
attgagtgcaagaacaagtcagcctcgtggaattcagcccagataaccaaagatgtgtcc
ccccagctgaaccaggccaccattatagagctgcacccctcctccacctacaacatccgc
atattcgccaagaacaacatcggcaagagcgacaccagcaacgagctcaccatcaccact
gacgaagcagcccccgatggccctccacaggaagtacaactggaggccacctctccacaa
agcatcaaagtcacctggaagggcccccacaagcaccttcagaatggggtgatccggggc
taccaggtgggttacagagagtacagctctggaggcagcttccagtttaacatcatcagc
atggacaccacaggggagagcagcgagagcatcaccctggacaacctgaggaagttcact
gagtatggggtggtggtgcaggcagctaaccgtgctggcaccgggccctcctctcaggag
gtcatcaccaaaacactggaggatgtcccctcgcgtccccctgagaatgtcctggccatg
gccaagtccccagaagtaatctctctgtcctggttgaccctgcccaaagaggccctcaat
ggaaacctgcagggctacagagtcatctactgggccaacctgccagacggagagttggga
gagatcaggaacgtgacgacctcctacccgtctctggaactggatggtctggagaaatac
accaactacagcatccaggttctggccttcacccgggccggggatggggtgcgcagtgag
cagatcttcacccggaccaaggaagatgtccctgggcctccagcgggggttaagagtgca
gccgccaccagctccgtggtgtttgtgtcctggctccctcctctcaaactcaacggcatc
atcaggaagtacattgtcttctgttccaacctgcaccccacggtgatgagtgagtttgag
gcttctcctgatgtgtatttctacagagtgccaaacctggcccgcaacaggaagtacagc
atctgggtggttgccgtgacagccgctgggcgaggcaacagcagtgagaccatcacagtg
gaacctcgggccaaagctcctgccaggatcctgacgttcaacggaacagtgactacaccc
tggatgaaggacatcattctgccctgcaaggcggtcggagatccaccccccaccatcaag
tggctgaagggaaacaatggtacccctgcccctgttctgattgatggacgccgcagtgtc
catagcaacggtagcttcatcatccgaacggtgaaagcagaggactctgggaactacagc
tgtgtggccagcaacaactggggctctgatgagatcacgctcaacctgcaggttcaagtt
cctccagaccaaccacgtctcacagttaccaagacaaccaccacatcaatcactctgtcc
tggatacctggggacaacggaggaagctccatcagaggctacatcctgcagtactcagag
gacaacagtgagcagtggggcagctttcccatcagccctagcgagcgctcgtaccgtctg
gagaacctgaagtgtggcacttggtacaagttcaccctgactgctcagaatggagtgggc
cccggacgcatcagtgagatcattgaagcaaaaacacacggaaaagagccccagtttgcc
aaagaacacgagctgtttgccagcatcaattccacccgggtcaggctcaatctaattggg
tggaacaatggcggctgcccaatcacctcattcaccctggagtaccgtccggtggacacg
gcaatgtggaccatggcccagcgcacctcactaaccaagagctacatcctgtacgacctg
gcggaagccacctggtacgagctgcagatgaaggtggtcaacagcgctggcttcgccgag
aagaaaatcacattcgccacgctcaacgccgatggaagtactatccctcctctgttgaag
acagtggaccccatcacagacaacatgtcaggcaacgaggggctgaagatgatggtgacc
atcacctgtatcctggtggctgctgtcatggtcttcatcctcctgatggtgctgaagagg
aggaggagggagcagaggctcaagaggctacgcgatgcaaaaagcctggcagaaatgctg
atgagtaaaaacacacggacaccagacacatcgaacaagcagcaagccatgagaatgcac
atcgacatcccccgagcccagctgctcatcgaagagagagatactatggagactatcgac
gacaggtcgacggtgctgctgacagataatgactttggggagacgtccaaacagaagtcg
tccactgtcacgcacacagtccactaccagtccctgtcgcaggccaccggcccactggtg
gacgtctccgatgcccggcctggaaccaaccccacagcacgccgcactgccaaagcgggc
cctgcagccagcaggaaccgatacgccagccagtggaccctgaaccccccccaaccaccc
acctcctcccacactctgagcacagactggagactgcccacaccgcgcgccaccggctct
gtggacaaggagagcgatagctacagcgtcagcccatcgcaggacacaggtactggactg
accctatgtctcacatacaacattagtctgcagcaaaggggagaccactactactgtacg
tggaagggtcagagtgctcacgaccgcgcgcggagcagcatggtgtcgacagagagcgcg
tcgtccacgtacgaggagctggcccgagcctacgagcacgccaagatggaggagcaccta
cggcacgccaagttcaccatcacagaatgcttcatctccgacacctcctcagagcaaatg
actgccggcaccaatgactacacagacagcctgacgtccagcacgccgtccgagtcaggc
atctgcaggttcaccgcctccccgcccaagcctcaggacgtcagccgggttatgaacatg
gcagcacccaaggcccacagaccgggaggagagctggtgcacctgcccccgtacctacga
atggacttcctgttaaaccgtggctctgcatcgggaggccgggggtccaatggtggcaac
ggaggaagagaaggaggaggaggggagacaggtgcgttgggtcaggcgtgtttggagccc
cagaagagccgcacactgaaacggcccccgctcctggaacccacacccatggaggtgccc
acatccagggaggtgcagcagtggcagccagggactgcctccacccttccccagcgtgag
cccactggccgtgaggccaccggagacctggcccaggccccggctgccaagctcagcagc
tcacaggagtccctgctagactccagaggacacttaaaacagagcaacaacccctacgca
aagtcctacacactggtataa
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integrated database retrieval system
