Oncorhynchus mykiss (rainbow trout): 110504045
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Entry
110504045 CDS
T07259
Name
(RefSeq) tsukushin isoform X1
KO
K08130
tsukushi
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
omy00535
]
110504045
Proteoglycans [BR:
omy00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
110504045
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_14
LRR_LRWD1
LRR_RPS2
LRR_EndoS
LRRNT
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
110504045
NCBI-ProteinID:
XP_021438529
Ensembl:
ENSOMYG00000040567
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Position
24:complement(23814602..23838054)
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AA seq
356 aa
AA seq
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MVKSMMAFLLCVSLWMLLAVHGQAGAVKNCHPGCHCEVESFGLFDSFSLTRVDCRGVGPS
TNPISIPLDTAHLDLSSNSMSLLTDTMLSGPGYTTLVSLDLSNNLISMVSPKALSRLRYL
ESLDLSHNSLEGLDEGCFSGLSLTEVDLSHNHFREFDLDMFITKDHGEPISVDLSHNRLT
VVSLSSSRSPLLHVQSLTLAANQLRAVPKLKGILLRDLNLDGNSISRIEEGAFEDLKDLV
YLSLSGLPELFNIQPNCFRGLQNLQVLDLSNNAKLKTLSPAVFSGLVSLQELNLSNSGVT
SLPNNMLSHLPIIKSITLGQNIHCWRAQKQGQFHRQLGQEQKHDEVLTCDVEGVIS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagagcatgatggcgtttctcctgtgtgttagcctgtggatgctcctggcggtc
catggccaagctggagcagtgaagaactgccacccgggttgccactgtgaggtggagagc
ttcggcttgttcgacagcttcagcctgaccagggtggactgcaggggagtgggccctagc
accaaccccatctccatccccctggacactgcccacctggacctctcctccaactctatg
tccctgctgactgacaccatgctctctgggcctggctataccaccttggtcagcctggac
ctcagcaacaacctcatctccatggtcagccctaaggccctgtccaggctgcgctacctg
gagtctctggacctcagccacaactctttggagggcctggacgagggctgcttctctggc
ctctccctaaccgaggtggacctcagccacaaccacttccgagagtttgatctggacatg
ttcatcactaaagatcacggagagccaatcagcgtggatctgtcccacaaccggctgaca
gtggtctccttgagttcttctaggagccccttgctacatgtccagagcctgactctagca
gccaaccagctgagggccgtgcccaagctaaaaggcatcctgctgagggacctaaacctg
gatgggaacagtatctcccgcattgaggagggtgcttttgaggacctcaaggaccttgtt
tacctgtccctcagtgggcttcctgagctctttaacatccagcccaactgtttcagaggc
ctacagaaccttcaggtcttggacctctccaacaacgccaagctaaaaacactgagccca
gctgtgttcagtggacttgtgtctctacaggagctcaatctgtcaaactctggagtaacg
tcattgccaaataacatgctaagtcacttgccaatcatcaagagtatcaccctgggccag
aatatccattgttggagggctcaaaagcagggccagtttcacaggcagctcggacaggaa
cagaaacatgacgaggtgctaacctgtgacgttgaaggggttatctcatga
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integrated database retrieval system
