Oncorhynchus mykiss (rainbow trout): 110504049
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Entry
110504049 CDS
T07259
Name
(RefSeq) LIM/homeobox protein Lhx1
KO
K09372
LIM homeobox protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110504049
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
110504049
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
110504049
NCBI-ProteinID:
XP_021438533
Ensembl:
ENSOMYG00000040778
UniProt:
A0A060Y7L0
LinkDB
All DBs
Position
24:complement(24130444..24140042)
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AA seq
405 aa
AA seq
DB search
MVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRRFG
TKCAGCSQGISPNDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLT
HSNGKDTNLLSVTACSDPSLSPDSQDQLQDDVKDSEIANLSDKETGSNENDGENLGGKRR
GPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQL
SALGARRHAFFRSPRRMRTLVDRLEPGELIPNGPFSYYGDYQSEYYGPGGNYDFFPQGPP
SSQAQTPVDLPFVPSSGPTGTPLGGMDHPLPGHHPSSEVQRYSDIMSHHPGDSPSPEPGI
PGPMHSISSEVYGPSPPFTSLSLNGSGYGNHLSHAPSEMNEGTVW
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggtccactgtgccgggtgcgagaggcctatactggacaggtttctcctcaatgttctg
gacagagcgtggcacgtcaagtgcgtacagtgctgcgagtgtaaatgcaatttaacagag
aaatgcttttctcgagaggggaaactatattgcaaaaacgacttctttaggaggtttggg
acaaagtgcgcgggctgttctcagggcatctcgccgaacgacttggtccggagggcaagg
agcaaagtgtttcatctcaactgcttcacctgcatgatgtgtaacaaacagctgtccacg
ggagaggagctctacatcatagacgaaaataaatttgtctgcaaagaagattatctaacc
cacagcaatgggaaagacacaaaccttctctcagtaacagcatgtagcgacccaagttta
tcaccggattctcaagatcagttacaggacgatgtgaaggactctgaaatagccaatctg
tctgacaaagaaacgggtagtaatgagaacgatggcgagaaccttggcggtaaacgacgt
ggaccgcgaaccaccatcaaagcaaagcaactggagaccctaaaagcggcattcgctgcc
acccccaaacccacgagacacatcagggagcagctcgcgcaggagacggggctgaacatg
agagtcattcaggtatggtttcagaacaggcggtccaaggagcgacgtatgaagcaattg
agcgccctgggcgcgagacggcacgcgttcttccggagcccgaggagaatgagaacgcta
gtggaccggctggaacccggggaattaattccaaacggtcctttctcgtactacggagat
tatcaaagtgagtactacggtccaggagggaactacgacttctttcctcaggggcctccg
tcgtcgcaggcacagaccccggtagacctcccattcgtgccctcctcaggcccaacgggc
acccctctaggtggtatggaccatcccctgcccgggcaccacccctccagtgaggtgcag
cgctattctgacatcatgtcccaccaccctggggactcgcccagcccagagccaggcatc
ccggggcccatgcacagcatctcctctgaggtgtacggccccagcccgccctttacctca
ctgtctctcaatggcagcggatacggcaaccacctgtcccatgcaccctcggaaatgaac
gagggcaccgtctggtag
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