Oncorhynchus mykiss (rainbow trout): 110504100
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Entry
110504100 CDS
T07259
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1 isoform X1
KO
K03260
translation initiation factor 4G
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110504100
03012 Translation factors [BR:
omy03012
]
110504100
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110504100
mRNA cycle factors
Stress granule specific factors
110504100
Translation factors [BR:
omy03012
]
Eukaryotic type
Initiation factors
eIF-4
110504100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
MA3
W2
Motif
Other DBs
NCBI-GeneID:
110504100
NCBI-ProteinID:
XP_036817403
Ensembl:
ENSOMYG00000042209
LinkDB
All DBs
Position
24:complement(26955783..27027806)
Genome browser
AA seq
1689 aa
AA seq
DB search
MNKAPQSITRPHPALSPGLQLPTFPPGQPPSVVFATPPPQMNPAPQPRQFAPVPRALHQQ
GGFRSLQPYYSRPSLHSNASRVPPSSTPRPVAPTHVYQPGQQMMMIPSQRIPFPNQQGPT
YFIPGQYRSTYVATPQQYPVPPGTPGFYPGTSPAEYGTYAGAYYPAQQQYTPSLPTAPAI
MNPPPQQQQLPPQQQIQPKRERKQVQIIIRDPNQGGRDITEEIMSGGTRSGTTPTPPQVN
DDSSESSGSEGPAVAQANGENVTPVVVRPDDRGKPAATLITGPPALSKTPELVKTAPTEV
KLPDTDSKSPSLPQDLPTSPRVTTTLHTTAPGTPPPSTCPIADMMDAPAPAAAPALSPPK
VPAYPAPLPEPRPTPAAEEQPSAAKEAQVKEKEIKEVTEAREVTTSSKPEPSLAPVTNPS
SSTNGMSATQPLPEEEPVALSITMPSLQAAEPPLESPIAQPEELRLPNGLPLPSSQDPEK
VSAELSECDLSPIAEPEVTPLQREAPAPIAATANPDPVVQATVAPVVLAETAITTEITPR
QIEDEMDSSPSQHTIPPGENSMQAAVSVPKKKRKMKDLNRKETVGDLLDAFKEEQVVQSP
PEQATPTSASDTEEPRPATTPAVAEVDETWEEKEDKLDAENIEPKPGDLKYQYKEELCRP
IDPEEKKRYDRDFLLGFQFISAAMSKPVGLPQISDVVLDKANKAPLRQLDPSRLPGMNMG
TDFTPSFANLGRPGMGGGGGGGGGGGGGGHRGPPSGMGGGGPRRSQQGQRKEPRRIINIS
SSLTDDVKLNKAEDAWKPAVKKAASGQAAPEEESDNPEQAKTHELFKRVRSILNKLTPQM
FQQLMKQVKELTIDTEERLKGVIDLIFEKAISEPNFSVAYANMCRCLMGLKVPTTDKPGV
TVNFRKLLLNRCQKEFEKDKDDDVIFEKKQEELDAAAMEEKDRLKAELEEAKDIARRRSL
GNIKFIGELFKLKMLTEAIMHDCIVKLLKNHDEESLECLCRLLSTIGKDLDFEKAKPRMD
QYFVQIDKIIKEKKTSSRIRFMLQDVLDLRRNTWVPRRGEQGPKTIDQIHKEAELEEHRE
VLKVQQQLLNQNTRGGRGGGGGRDQGNRGGQHPQSGQRSQPQDEGWNTVPISTKSRPIDT
SRLSKITKPGALDFNNQLLAPQLGGKGMWGSWGKGSSGGTTGAKPAGEATPESGGRPATS
TLNRFSALQPQQPSSSGPSQDSDRRVPLRNSSSRDRGSDKFERLDRGSNDRFGRRDDRNP
VTKRSFSRETEEHRREKEHRGPSDPIRRVASMTDDRGTRDRARSKENVKREAAATPPAQT
KPSLREEELEKKATAIIEEYLHINDMKEALQCVVEMNSTRLLFVFVRSGLESTLERSPIA
RERTGLLLHQLYKAGTLPTEQYYRGLQEILEVAEDMAIDIPHIWLYLAELITPMLHEGGI
PMGPLFKEISKPLVPQGTAGVLLAQILTLLCRGMSRKKAGAMWREAGLSWKDFLPEDEDV
NKFVTEKNVEFTLGGDDETEKSSKKELSSEELNKQLDRLIQDKADNQRIYDWVEANLDET
QISSNGFVRAVMTAICQSAILCENPYKLDAKVITRRAKLLHKYLKDEQKELQALYALQAL
MVEMEQPANLLRMFFDTLYDEDVIKEQAFYKWESSKDPAEMQGKGVALKSVTAFFTWLRE
AEDEESDNS
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcaccacagtctataacgcgaccccaccctgccctctcccctggactccag
ctacccaccttccctcctggacagcccccctctgttgtctttgccaccccacctccacaa
atgaacccagcgccacagccccgacagttcgcccccgtgccccgtgctttacaccaacag
ggaggattcaggtcactgcagccgtactacagccgtcccagtctgcacagcaatgcctcc
cgggtgccccccagcagcacgccgaggcccgtggcgcccacacacgtctaccagccaggc
caacagatgatgatgatcccctcacagcggatccccttccccaaccaacaaggccccacc
tacttcatacccggacagtaccggtcaacgtacgtggccaccccccagcagtacccggtc
ccgccgggcaccccaggcttctacccaggcaccagcccagctgaatatggtacttatgca
ggggcatactacccggcccaacagcagtacacgccctccttgccgactgctccggctatc
atgaaccctcccccccagcagcagcaactacctccacagcaacagatccagcccaaaagg
gagcgcaaacaggtacagatcataatacgagaccctaaccagggtggtagagacatcact
gaggagattatgtcagggggcactcgcagtggcaccacccccacacccccacaggtgaac
gacgactcttcagagtcatctggatcagagggcccagccgttgcccaggccaacggtgag
aacgtgacacctgtcgtggtcagaccagatgacagagggaaacctgcagccacactcatc
actggccccccagccctgtctaaaacccctgaactggtcaagactgccccgacagaggtc
aaactcccagacacggacagtaaatccccttccttaccccaggacctacctacatccccg
cgggtaactaccaccctccacactactgcccctggcacccccccaccctcaacgtgtccc
attgcagacatgatggacgcaccagccccggccgctgctccagccctatctccccctaaa
gtgcctgcttaccctgcacccctacctgaaccccgccccactcctgcagctgaggagcag
ccctcagccgccaaggaggcgcaggtgaaggagaaagagattaaagaggtaacggaggct
agagaagtgactacatcatctaaacctgagccttcccttgctccagtgaccaaccctagc
agcagcactaacggtatgtctgccacccagccactcccagaggaggagccagtagccctg
tccatcaccatgccctccctccaggcagcagaacccccgctggagtctcccatcgcccag
ccagaggagcttcgtctgcccaacggcctgccgctccccagctcccaggaccctgagaag
gtttctgcagagttgtctgagtgtgacctcagccccatcgctgagcctgaggtgacccca
ttacagagggaggcacccgcacctatcgccgccacggcaaatcccgaccccgtcgtccag
gcgaccgttgcccccgtggtcctagctgagactgctattactacagagataacccctcgc
caaattgaagacgagatggactcttcaccatcacagcacaccatcccacccggggagaat
tctatgcaagctgctgtttctgtgcctaagaagaagaggaagatgaaggatctgaacagg
aaggagactgttggagacctcctggatgcctttaaggaggagcaggtagtgcagagcccg
ccagagcaggccacacccacttctgcctctgacaccgaggagccccgcccagccaccacc
cctgccgtcgcagaggtagatgagacgtgggaggagaaggaggacaaactggatgcagag
aacattgaacccaagcccggggatctgaagtaccagtacaaagaggaactatgtaggcct
atagacccagaggagaagaagaggtatgacagggacttcctgctcggcttccagttcatc
agtgctgccatgtccaagcctgtgggcctgcctcagatcagtgatgtggtgctggacaag
gcgaataaggcacctctccgccagttggaccccagccgtttgccggggatgaacatgggc
actgacttcacgccctcatttgccaacctgggcaggcctggaatggggggaggaggagga
ggaggtggtggtggtggaggaggtggacacagaggaccaccctctggtatgggtggtgga
ggaccgcgtcgctcccaacagggccagcgtaaggagcccaggaggatcatcaacatctct
tcgtctctgacggacgacgtgaaactcaacaaggctgaggatgcctggaagcccgctgtc
aagaaggctgccagtgggcaagcggctcctgaggaggagagcgacaacccagaacaggcc
aagacccatgagctgtttaagagggtccgtagtatcctgaacaagctgacccctcagatg
ttccaacagctaatgaagcaggtcaaggagctgaccatcgatacggaggagaggctgaag
ggagtgatagatctgatctttgagaaggccatttctgaacccaacttctctgtggcctac
gccaacatgtgccgctgccttatggggctcaaagtccccaccacagacaagccgggagtc
actgtgaatttccgcaagctgcttctgaaccgttgtcagaaggagtttgagaaggacaag
gacgatgatgtcatctttgagaaaaagcaagaagagctggacgctgcagccatggaagag
aaggatcgcctgaaggcggagttggaggaggccaaagacattgcacggcggcggtcgcta
ggcaacataaagttcatcggtgagctgttcaagctcaagatgctgacggaggccatcatg
cacgactgcattgtcaagctgctgaagaaccacgatgaggagtcactagagtgcctctgt
agactcttgtcaactataggcaaggacctggactttgaaaaggccaagcctcgtatggac
cagtactttgtccagatagacaagatcatcaaggagaagaagacatcgtccagaatccgc
ttcatgctgcaggacgtactggacctcaggaggaatacgtgggtccccaggagaggagag
cagggccccaagaccatagaccagatccacaaggaggcagagctggaggagcacagggag
gttctcaaggtgcagcagcaactcctcaaccagaacacccgaggaggacgtggtggagga
ggaggaagagatcaggggaaccgcgggggccaacacccccagtcgggccagaggagtcag
ccccaggacgagggctggaacacagttcccatctccaccaagagcagacccatcgacacc
agccgactcagcaagatcactaagcctggggctttggacttcaacaaccagctgctggcg
ccccagctcgggggtaagggcatgtggggcagttggggcaagggcagcagtgggggcacc
accggagccaaacccgccggggaagccaccccagagtcaggaggccgcccagccaccagc
acccttaacaggttctcagccctgcagccacagcagccctcctcctcagggccctcacag
gactcggacagaagagttcctctaaggaacagctcgagccgggaccgtggcagcgacaaa
tttgaacgtcttgaccgtggcagcaacgaccgcttcggccggcgggacgacaggaacccg
gtcaccaagcggagctttagtagggagacggaggagcaccgcagagagaaggagcaccgt
ggcccttctgatcccatacgccgcgttgccagcatgaccgacgaccggggcaccagagac
cgagctaggagcaaagagaatgtgaagagggaagctgctgcaacacctcctgcccagacc
aaaccttccttgagggaagaagagctggagaagaaggccacagctatcatagaggagtac
ctacacatcaacgacatgaaggaggcgctgcagtgtgtagtggagatgaacagcacccgg
ctgctctttgtgtttgtaaggagcggtctggagtctactctggagcgcagccccatcgcc
agagaacgcaccggcctgctgctgcaccagctgtacaaggcaggcaccctgcccacagag
cagtactacagagggcttcaggagatactggaggtggcagaggacatggccatagacatc
ccccacatctggctctacctggctgagctcatcacccctatgctccacgaaggaggcatc
cccatgggaccgctcttcaaggagatatccaagcccctggttcctcaggggacggctgga
gttctgctggctcagatcctcaccctactctgcagaggaatgagccgtaaaaaggcaggc
gccatgtggagggaggcggggcttagctggaaagactttctgcctgaggatgaggacgtc
aacaagtttgtgacagaaaaaaatgtggagttcaccctgggaggagatgatgagacagag
aagagcagtaagaaagagctgagctcagaggagctgaacaaacagctggacagactcata
caggacaaggctgacaaccagaggatctacgattgggtcgaggctaacctggacgagaca
cagatatcctccaacgggtttgtcagagcagtcatgacagccatctgccagtcggccatc
ctgtgtgagaacccttacaagttggatgcgaaggtgatcacccggagggccaagctgctc
cacaagtacctgaaggatgagcagaaggagctacaggctctctacgccttgcaggccctc
atggtggagatggagcagcctgccaacctgctgcggatgttctttgacacgctgtacgac
gaagacgtgatcaaagagcaggccttctacaagtgggagtccagcaaggaccccgctgag
atgcagggcaagggtgtggccctgaagtcagtcactgccttctttacctggctccgtgag
gccgaggacgaggagtctgacaacagctag
DBGET
integrated database retrieval system
