Oncorhynchus mykiss (rainbow trout): 110504162
Help
Entry
110504162 CDS
T07259
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
omy04517
IgSF CAM signaling
omy04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110504162
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110504162
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110504162
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
PDZ_6
RA
cNMP_binding
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
110504162
NCBI-ProteinID:
XP_036826245
LinkDB
All DBs
Position
31:38968135..39096498
Genome browser
AA seq
1654 aa
AA seq
DB search
MASYVDNSFRQAVMMNPAERTQQDLEIVYSYLHGMEALSNLREHQLRIICETVRYERHEA
NEVLYYPDDVGSCWFILLSGSVFIKESMFLPRSSFGKRSAGSLRRGCECIVLEPSEMIVV
DYMDQNEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPTGKPPIARGYRTLPADF
SRLHLADGLHPQVTHVSSSHSGCSITSDSGSSSLSDIYQATENEPGDMDLSGLPETAVDS
EEDDDEEDMERASDPLMSRDVVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANMTMSVRR
ELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPEGRPEILCMGNSFGVSPTM
EKEYMKGVMKTKVDDCQFVCIAQQDYCCILNQVEKNMQKVEEEGEIVMVKEHRELDRTGT
RKGHIVIKGTTERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMVVGKKLLEWFHDPSL
RDKVTRVVLLWVNNHFNDFEGDPAMTHFLEEFESNLEREVRVSKMCGHLRLLNIACAAKA
KLRLVTLTKPSREAPLAFTLLGGSEKGFRIFIDSVEPGSKAAEAGLKRGDQILEVNGQNF
ENVQLTKANEILRNNTHLSISVKTNLLVFKELLARPEHDHEAEGEDLPEVDRKNGAPAHL
PKIGDIKKGSRYSIPDLAVDVEQVMGLEKASKKAKANTVGGRNKLKKIFDKTLTSILPPK
PYNDVGVGQSQDDSIVGLKQSKQIPASLPVSSNLSSSNPDLLQSHHRILDFNNQPAPVVT
NMSDQVLRVFKADQQSRYIMIGKDTTAKEVVAQAIREFALTAVPEAYSLCEVSVTPEGVI
KQRRLPEQLSKLADRIQLSGRYYLKSNMETETLCSDEDAQDLLREGQISLLQLSTVEVAT
QLSMRAFELFCAIEPTEYIDDLFKLKSKTGSFCLKRFEEVINQETFWVASEVIREPNQLK
RMKIVKHFIKIALHCRECKNFNSMFAIISGLNLAPVSRLRGTWEKLPSKYEKLFGDLQDL
FDPSRNMAKYRNVLNNQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKE
IRHVGRMASVNMDPALMFRTRKKKWRSLGSLSQGSANAAVLDVTQTGGHKKRVRRSSFLN
AKKLYEDAQMARKVKQYLSNLSLETNEEALQTLSLQCEPSINTLPKNAGGGKRPDTSPVV
SRAASQQRGQLQKGNQALQVPAVALYPSRKKVPVKDLPPFGTSSPQSLKKILSLSEEASE
RHKRQTEDTVSNASSQLSSPPTSPQSSPRKGYPRTGDTYSDSGHSEISSRSSLVSNSSFD
MAQEERRGLRHSGGVGDPHAGGVRLERRATTDPDQYSLGSYSSMQDCRGLYACAMVLSSP
SSEELTQDQGDRVSLDAADSGRGSWTSCSSGSHDNIQTMQQGRSWETLAFGPGGVIGGSI
GVHPPGGPEALLGGPAGLWASQARGSWASASSSSSAAYWGEDSEGDTGTIKRRGGKDVNT
DPETSSITSMGSDEAKQHGRPSPSPITAGNKGLITRKESRYREPPPTPPGYTALTISDFS
EGQTQSPPLAPAHSGRRPPDYTTALQRSRMVTQSPDSHHHHQAQQHAKRQGLHRTRSPGE
EEEPEEEEEGESLSPKLVALRKTVAHTTPETTRP
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttatgtcgataacagctttcgtcaagctgtgatgatgaatccggcagaaaga
acgcaacaggacctggagatagtctactcctatcttcacgggatggaggccctttctaac
ctcagagaacaccagctgaggataatatgtgagacagtgcgctatgaaagacacgaagcc
aatgaagtgctctactacccggatgacgttggaagctgctggtttattctactgtccggg
tccgtcttcatcaaggagtccatgttcctgccaagaagcagttttggaaagcgttctgca
gggagcctgagacgcggatgcgagtgcatcgttctggaaccttccgagatgattgtggtg
gactatatggaccaaaatgaggagtacttccagcggcaagcatcgcaccgacagtcccgc
cggaggttccgcaagatcaaccagaagggcgagcggcagaccatcatcgacacggtggac
ccgtaccccaccggcaagccgcccatagccaggggataccgtacgctccccgcggacttc
agtcgactccacctggccgacggcctgcacccacaggtgacccacgtttcttccagccac
tcaggatgtagtatcaccagcgactctggaagcagcagcctgtcagacatataccaggcc
acggagaacgagccgggcgacatggacctcagcggcctgcccgagaccgccgtcgactca
gaggaggacgacgacgaggaggacatggagcgagcgtcggaccccctcatgagccgcgac
gtcgtgcgggactgcctcgagaaggaccccatggaccgcaccgatgacgacatagagcaa
ttactggagttcatgcatcagctgccagcgtttgccaacatgaccatgtcggtgaggagg
gagctgtgtgccgtcatggtctttgccgtggtcgagcgggccggcaccatcgtcctcaac
gacggggaagagctggactcgtggtcagtgatcctgaatggctcggtggaggtgacgtac
cccgagggcaggcctgagatcctgtgtatggggaacagctttggggtctcccccaccatg
gagaaggaatacatgaagggagtaatgaagaccaaggtggacgactgtcagtttgtgtgc
atagcgcagcaggactactgctgcatcctcaaccaggtggagaagaacatgcagaaggtg
gaggaggagggcgagatcgtcatggtcaaggagcaccgcgagctggaccgcaccggcacc
aggaagggacacatcgtcatcaagggtacgacggagcgtctgaccatgcacttggtagag
gagcactcggtggtggaccccacctacatcgaggacttcctgctgacctacagaaccttc
ctctccagccccatggtcgtgggcaagaagctcctcgagtggttccatgacccaagcctc
agggacaaggttacacgggtagtcttgctgtgggtgaacaatcacttcaatgactttgaa
ggcgaccccgcaatgactcactttcttgaagagttcgaaagcaatctggagagagaggtc
cgtgtctcaaaaatgtgcggccatcttagactgttaaacattgcctgtgctgctaaagcc
aaactgcgtctcgtgacactgaccaagccgtcgagggaggccccgctagccttcaccctg
ctggggggctctgagaagggcttccgcatcttcatcgacagcgtggagcccgggagcaag
gccgcagaggccggcctcaaacgaggagaccagattctggaggtgaatgggcagaacttt
gaaaatgtccagctcaccaaagccaatgagatcctgaggaacaacacccacttgtccatt
tctgtgaaaaccaatcttttagtgttcaaggagctactagcccggccggagcacgaccac
gaggcagagggtgaggatctgccagaggtggaccgcaagaatggagccccggcacaccta
cccaagattggggacatcaagaagggctcgcgctactccatccctgacctggcggtggac
gttgagcaggtgatgggcctggagaaggccagtaagaaggccaaagccaacacggtggga
ggaaggaacaagctcaagaagatcttcgacaagacgctcaccagcatcctgcccccaaaa
ccatacaacgatgtgggcgtgggccagtcgcaggacgacagcatcgtgggcctgaagcag
tccaagcagattccggcctcgctgcctgtcagcagcaacctatcgtccagcaaccctgac
ctgctgcagtcccaccaccgcatcctggacttcaacaaccaaccggccccggtcgtgaca
aacatgtccgaccaggtgctgcgagtgttcaaggcagaccaacagagtcgatacatcatg
attggtaaggacaccacggccaaggaggtggtggcccaggccatccgagagttcgccctg
accgcggtgcccgaagcctattcgctgtgcgaggtgtccgtcacgccggagggtgtcatc
aagcaacggcggctaccagagcagctgtccaagctggctgataggatacagctcagtggc
agatactacctgaagagcaacatggagacagagactctctgttcagacgaggacgcccag
gaccttcttcgggaaggccagatctccctcctccagctctccactgtggaagtagccacg
cagctctccatgcgtgccttcgaactcttctgcgccatcgagcccaccgagtacatcgat
gacctgttcaagctgaagtccaagacgggctcgttttgcctcaagcgcttcgaggaggtc
atcaaccaggagaccttctgggtggcgtcggaggtgatcagggagcccaaccagctcaag
cgcatgaagattgtcaagcacttcatcaagattgctctccattgtagagagtgcaagaac
ttcaactccatgttcgctatcatcagtggtctgaacctggccccggtatctagactccgg
ggcacgtgggaaaagctccccagtaagtacgagaagctgtttggggacctgcaggacctg
tttgacccgtccagaaacatggccaagtaccgcaacgtgctcaacaaccagaacctccag
ccgcccatcatccccctgttccctgtaatcaagaaggacctcaccttcctgcatgaaggg
aacgactccaaagtggacggcctggtgaactttgagaagctgcggatgatcgccaaggag
atccgtcacgtgggtcgcatggcctccgtcaacatggaccctgcgctcatgttcagaacc
aggaagaagaaatggaggagtttagggtctcttagccagggcagtgccaacgcggcggtg
ctagacgtcacccagacgggcgggcacaagaagcgggtgaggcgcagctccttcctgaac
gccaagaagctgtacgaggatgcccagatggcccgcaaggtcaagcagtacctgtccaac
ctcagcctggagaccaacgaggaggcgctgcagaccctctcgctgcagtgtgagccctcc
atcaacacactgcccaagaacgctggtggcggtaagaggccagacacgtctccggtggtg
tccagggctgccagccagcagaggggccagctgcagaagggcaaccaggcccttcaggtg
cccgctgtggccctctacccctcccgcaagaaagtgccagtcaaggacctgccaccattc
ggcacgagttcccctcagtcgctgaagaagatcctatcgctgtcggaggaggccagcgag
cgtcacaagcgtcagacggaggacacggtgtctaatgcctcctcgcagctctcctcccct
cccacctccccccagagctcgcccaggaagggctacccaagaacgggagacacctactcg
gactcgggtcacagcgagatttcgtcgcgctccagcctggtcagcaactcctccttcgac
atggcccaggaggagaggagggggctcaggcactcaggaggggtgggagacccccacgct
ggaggggtgcgtcttgagaggagggctacgaccgaccctgatcagtacagcctcggttcc
tactcgtccatgcaggactgccggggcctgtatgcctgcgccatggtgctctcctccccc
agctcagaggagttgacccaggaccaaggggaccgtgtctccctggacgccgccgatagc
ggccgcggctcctggacctcttgctcctcgggctcccatgacaacatccagaccatgcag
cagggacgtagctgggagaccctggccttcggaccggggggtgtcatcggcgggagcatt
ggtgtccacccacccggggggcctgaagcattactagggggccccgctggactgtgggcg
tcccaggctagaggtagctgggcatcggcctcttcatcttcctctgcggcgtactggggc
gaggactccgagggcgacacgggcacgattaaacggcgaggcgggaaggatgtgaacacc
gacccggagacgagtagtatcacatcgatggggtccgacgaggccaagcagcacggaagg
ccttcgccatcacccatcactgccggaaacaagggccttatcacgcgaaaggagagccgg
taccgcgagccccctccaaccccgccgggctacactgccctgacaatctctgacttcagc
gaagggcagacgcagtcgccgcccctagccccggcccactccggccgccgcccgcccgat
tacaccacggccctgcagcgctcgcgcatggtcacccagtcgcctgactcccatcaccac
caccaggcccaacaacatgccaagcgccaagggctccaccgcacccgctcgccaggcgag
gaggaagagcctgaggaggaagaggagggtgagtccttgtctcccaaactagtcgctctg
aggaagacagtggcacacacaacaccagagacaaccaggccatga
DBGET
integrated database retrieval system
