Oncorhynchus mykiss (rainbow trout): 110504224
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Entry
110504224 CDS
T07259
Name
(RefSeq) TATA box-binding protein-like 2
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110504224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110504224
03021 Transcription machinery [BR:
omy03021
]
110504224
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
110504224
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110504224
RNA polymerase III system
TFIIIB
110504224
RNA polymerase I system
SL1/TIF-1B
110504224
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
110504224
NCBI-ProteinID:
XP_021438710
Ensembl:
ENSOMYG00000020011
LinkDB
All DBs
Position
25:complement(31632759..31636055)
Genome browser
AA seq
306 aa
AA seq
DB search
MDEDSALESYFDDPIGNVPDASGFLFEGDLGLQGAPQLQDPSFLSSLSQPEKDIGEDLDL
SFLPDDLPEDTCGNAATNANMTQDRVFDGYRPEESAETDPNQSAMTGSSTFCPMTPMTPM
TPVAESSGIIPMLQNIVSTVNLACPLDLKSIALQARNAEYNPKRFAAVIMRIREPRTTAL
IFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVCFPIRLEG
LVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERGEIYEAFENIYPIL
KGFRKQ
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagattcagcattggagagttattttgatgacccaattggaaatgtacccgat
gcctctggcttcctgtttgaaggagacctgggcttgcagggcgcccctcagctccaggac
ccatcctttctctcctcgttgagccaaccagagaaggacattggggaggatctggatctc
agcttcctgcctgatgacctgccagaggacacctgtggaaatgctgcaactaatgctaac
atgacacaagaccgcgtgttcgatggctacaggcctgaggagtctgctgagactgaccct
aaccagtcggccatgaccggaagctctaccttctgtcccatgacgcctatgacccccatg
actccagtggctgagagttctggaataatccccatgttacagaatattgtatctacagtg
aatctggcttgcccactggacctgaaatccatcgctcttcaagccagaaacgctgagtac
aaccccaagcgttttgctgctgtcattatgagaatacgggaacctaggaccacagcactc
atcttcagctccggaaagatggtctgcacaggagccaagagcgaggagcagtctcgactg
gctgcccgcaagtatgctcgtgtggtgcagaaattgggctttcccgccaaattcctggac
ttcaagatccagaacatggtggggagttgtgatgtctgcttccccattcggctggagggt
ctggtgctgactcatcagcagttcagcagttatgagccagagctgtttcctggtttgatc
taccgtatggtgaaaccacgtattgtcttactgatctttgtgtctggaaaagtggttctg
acaggggctaaggaacgtggagagatctatgaagcctttgagaacatctaccccattctg
aaaggattcagaaagcaataa
DBGET
integrated database retrieval system