KEGG   Oncorhynchus mykiss (rainbow trout): 110504224
Entry
110504224         CDS       T07259                                 
Name
(RefSeq) TATA box-binding protein-like 2
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    110504224
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:omy03000]
    110504224
   03021 Transcription machinery [BR:omy03021]
    110504224
Transcription factors [BR:omy03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    110504224
Transcription machinery [BR:omy03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     110504224
  RNA polymerase III system
    TFIIIB
     110504224
  RNA polymerase I system
    SL1/TIF-1B
     110504224
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-GeneID: 110504224
NCBI-ProteinID: XP_021438710
Ensembl: ENSOMYG00000020011
LinkDB
Position
25:complement(31632759..31636055)
AA seq 306 aa
MDEDSALESYFDDPIGNVPDASGFLFEGDLGLQGAPQLQDPSFLSSLSQPEKDIGEDLDL
SFLPDDLPEDTCGNAATNANMTQDRVFDGYRPEESAETDPNQSAMTGSSTFCPMTPMTPM
TPVAESSGIIPMLQNIVSTVNLACPLDLKSIALQARNAEYNPKRFAAVIMRIREPRTTAL
IFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVCFPIRLEG
LVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERGEIYEAFENIYPIL
KGFRKQ
NT seq 921 nt   +upstreamnt  +downstreamnt
atggatgaagattcagcattggagagttattttgatgacccaattggaaatgtacccgat
gcctctggcttcctgtttgaaggagacctgggcttgcagggcgcccctcagctccaggac
ccatcctttctctcctcgttgagccaaccagagaaggacattggggaggatctggatctc
agcttcctgcctgatgacctgccagaggacacctgtggaaatgctgcaactaatgctaac
atgacacaagaccgcgtgttcgatggctacaggcctgaggagtctgctgagactgaccct
aaccagtcggccatgaccggaagctctaccttctgtcccatgacgcctatgacccccatg
actccagtggctgagagttctggaataatccccatgttacagaatattgtatctacagtg
aatctggcttgcccactggacctgaaatccatcgctcttcaagccagaaacgctgagtac
aaccccaagcgttttgctgctgtcattatgagaatacgggaacctaggaccacagcactc
atcttcagctccggaaagatggtctgcacaggagccaagagcgaggagcagtctcgactg
gctgcccgcaagtatgctcgtgtggtgcagaaattgggctttcccgccaaattcctggac
ttcaagatccagaacatggtggggagttgtgatgtctgcttccccattcggctggagggt
ctggtgctgactcatcagcagttcagcagttatgagccagagctgtttcctggtttgatc
taccgtatggtgaaaccacgtattgtcttactgatctttgtgtctggaaaagtggttctg
acaggggctaaggaacgtggagagatctatgaagcctttgagaacatctaccccattctg
aaaggattcagaaagcaataa

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