Oncorhynchus mykiss (rainbow trout): 110504286
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Entry
110504286 CDS
T07259
Symbol
lcmt2
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
omy03016
]
110504286 (lcmt2)
Enzymes [BR:
omy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
110504286 (lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
110504286 (lcmt2)
Transfer RNA biogenesis [BR:
omy03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
110504286 (lcmt2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_4
Kelch_KLHDC2_KLHL20_DRC7
Motif
Other DBs
NCBI-GeneID:
110504286
NCBI-ProteinID:
XP_036820858
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All DBs
Position
3:55380671..55388722
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AA seq
360 aa
AA seq
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MVTVEDPVYIHGGQYHLLGVNVREKPQVEESLSGADLEXSPTLLLSEVVLTYTETQLLLY
FFSXPWSDAVIGWAARLLPKLPFVMYEXISPHNPFGRVMHDXKLLLLPKAAIXMYSTSVK
XVLLSVWAECCLHGWEQCLDMNEFYLGLIPQKETRGVESLEPFDAFEPPPLAVRPVVGEM
CVEGLGMPLGPGLVLLSGGSGWGGREDTTARVLIRAKGGWRCACVKSSNDWGVILYHTVT
SVPGRGAVFGGRSSPLNPIRTLLRVTYDNASVRLSLKKMTCSGNXPQPRWRHTLTMGVAS
AVPWPLMLHSFCSALLXCSALLGDSDQSTTMALIGGEGNCFSVVTHHNPHPISVDLKPVL
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggtgacggtggaggaccctgtttacattcatggtggtcagtaccatctgctaggggtg
aatgtgagagagaagccccaagtggaagagtctcttagtggggctgatctagagnnttcc
cctaccctgctattgtctgaagtggtgctcacctacacggagacacagttgttattgtac
tttttctcttgaccctggtcggatgctgttattggctgggctgcaaggctcctccccaag
ttgccatttgtgatgtacgaatagatcagcccccacaacccctttggtcgagtcatgcac
gactgaaagctactgctgctacctaaagcagccatataaatgtactctacctctgttaaa
taagtgttgttaagtgtgtgggctgagtgttgtctacatggttgggaacagtgtctggat
atgaatgagttctacctgggtctgataccacagaaggagacacgcggagtagagagcctg
gaaccattcgatgcgtttgagccgcctcccctggctgtgaggcccgtggttggggagatg
tgtgtggagggtctggggatgcccctgggtcctgggctggtgctgctcagtgggggctca
ggctgggggggtagagaggatactacagccagggtcctcatcagagccaagggtggctgg
agatgtgcctgtgtgaaatcatccaatgactggggtgtcatactgtatcacacagtaaca
tctgtgcctgggcggggagctgtgtttggtggccgctcctccccactcaacccaatcaga
accctcctcagagtgacctatgacaatgcatcagtgaggctatccttgaagaaaatgacg
tgtagtggcaacncgcctcaaccaagatggaggcacactctgaccatgggggttgcttct
gctgtaccctggcctctcatgctgcactccttctgctcggcactccttnnctgctcggct
ctcctgggcgactctgaccagtcgacaacgatggctctgattggtggggaaggaaactgc
ttctctgttgtgactcatcacaaccctcaccccatcagtgtagacctgaaacctgttcta
taa
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