Oncorhynchus mykiss (rainbow trout): 110504356
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Entry
110504356 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04120
Ubiquitin mediated proteolysis
omy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110504356
04120 Ubiquitin mediated proteolysis
110504356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110504356
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110504356
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110504356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
FANCL_C
Motif
Other DBs
NCBI-GeneID:
110504356
NCBI-ProteinID:
XP_036826399
Ensembl:
ENSOMYG00000035249
UniProt:
A0A8K9XVB7
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Position
31:complement(7858125..7871099)
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AA seq
618 aa
AA seq
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MVRAALVTATSLALTGAVIAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFIKCFHWLA
EDRVDFMERSPNISWVFHFRVFSLMLLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVFTTFIKYTLHTVDLQSDNPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLLASDNVCIICREEMVT
GAKKLPCNHIFHASCLRSWFQRQQTCPTCRMDVLRASNPNQPPAPAPAQPPAPAAPVNAP
VPGPPGNVGPGMMPHFPPGLFPFWGPFPGAAPPAGAAGATETPGATEAAQTQGAGTTGAS
TVGAAPAPGGPMPGFPFHSFPPFPSAPWLTMPPPPPPFVSSMPPPPPALSTMSEAELREL
EQEGRRGLEARLQCLHNIHTLLDAAMLNIDQYLTTVATLIPPQSETSSAAGEASGSSPPS
TSAETQENQENDSQSSTAAEPEAVNGATGFSQPDSTTLSDSEDQGDGEEVGEDGEPNPSE
LRRRRLRKLETTPPPPDH
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtgcagcgctggtgactgccaccagtctggctctgactggcgctgtgattgcc
catgcctacttgctcaaacaccagttctaccccactgtggtctacctcaccaagagtagc
cccagtatggcagtgttgtacatccaggcgtttgtgttggtgttcctgttgggaaagttc
atgcgtaaagtcttcttcgggcagctgagagctgcagagatggagcatctgatagagcga
tcctggtatgctgtcacagagacgtgtctggcctttaccgtgttcagggatgacttctct
ccccgcttcgttgccctcttcaccctgctgctcttcatcaagtgcttccactggctggct
gaggacagggtggactttatggagagaagtcctaatatatcctgggtcttccacttcagg
gtgttctctctgatgttgttgctgggagtcctggacttcctgtttgtcaaccatgcctgt
cacagtatcatcacacgaggggcctctgtccagctggtctttggatttgagtatgccatc
ctgatgacaatggtgttcaccaccttcatcaagtacaccctccacactgtcgacctccag
agtgacaacccctgggacaacaaagcagtctacatgctctacaccgagctcttcactggt
ttcatcaaggtcctcctgtacatggcgttcatgaccatcatgataaaggtgcacaccttc
cccctatttgccatccggcccatgtacctggctatgaggcagttcaagaaagctgttacg
gatgcaataatgtcacggcgcgctatccgcaacatgaatacactttacccagatgccact
cctgaagatctgctggcttcagacaacgtgtgtatcatctgtcgtgaagagatggtgact
ggagccaagaaacttccctgcaaccatatcttccacgcaagttgccttcgctcctggttc
cagagacagcagacgtgtcctacatgtcgtatggatgtcctccgggcctctaaccccaac
cagcctcccgccccagcgcctgcccagcctcctgccccggcagcacctgtcaacgcccct
gtccctggtccacctgggaacgttggccctggaatgatgccccacttccccccagggctg
tttcctttctgggggcccttccctggagcggccccccctgctggtgccgctggcgccaca
gagaccccaggggccacagaggcagctcagactcagggagctggcaccactggggccagt
acagtcggtgctgctcctgctccaggaggccctatgcctgggttccccttccactccttc
ccaccattcccctcagctccgtggctgactatgccaccaccacctccaccgtttgtgtca
tccatgccccctcctcccccggccctgtccaccatgtcagaggctgagctgagggagctg
gagcaggagggccgtagaggcctggaggccagactgcagtgtctccacaacatccacact
ctactggacgctgccatgctcaacatcgaccaatacctcaccaccgtcgccacactcatt
cctcctcagtcagaaaccagcagcgcggctggagaggccagcggatcatctcctccctcc
actagtgcagaaacccaggagaaccaggagaacgactctcagagcagtacagccgctgaa
cctgaagctgtgaatggggccacaggtttctcccagccagactctaccacgttgagcgac
agtgaagaccagggggatggagaggaagtcggggaagacggagagcccaacccttcagag
ctgaggcgccgtcgtctccgcaaactcgagaccacaccccctcctcctgaccactaa
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