Oncorhynchus mykiss (rainbow trout): 110504382
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Entry
110504382 CDS
T07259
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04810
Regulation of actin cytoskeleton
omy05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
110504382
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110504382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110504382
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110504382
Factors involved in mRNA localization
Other mRNA localization factors
110504382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
110504382
NCBI-ProteinID:
XP_036825778
LinkDB
All DBs
Position
31:complement(15435904..15504294)
Genome browser
AA seq
1252 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCGEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLQQQLEVIPGYEELLAD
IVNISVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLGKIDKFFK
LQVVPLFGDMQIELSRYIETSAHYEENKSKWTCTQSSISPQYNLCEQMVQIRDDHIRFIS
ELARYSNSEVVTGSGLDSHKSDEEYRELFDLALRGLQLLSKWSTHVMEVYSWKLVHPTDK
FCNKDCPGTAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNQAIRNTIYA
ALQDFAQMTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGAREPPNDPCLRGEKDPKGG
FDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKHSFFF
THLLNFSEALQHCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMME
YVLYPLDLYNDSGYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMSGSVL
LDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLVTQRISAAMYKSLDQ
AISRFESEDLTSIVELEWLMDINRLTHRLLSKHMTLDSFDAMFREANHNVSAPYGRITLH
VFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHIY
SSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICRL
PRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCDL
LHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLLT
KERLCCGLSMFEVILTRIRSFLQDAVWRGPPPTNGVMHVDECMEFHRLWSAMQFVYCIPV
GTHEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDSKDEIIKNVPLK
KMADRIRKYQILNNEIFAILNKYMKAVETDSSTVEHVRCFQPPIHQSLATTC
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccacgtgactctggaggatgctctgtctaacgtggatctgttggaggagctg
cccctccctgaccagcagccctgcatcgaacctccgccttcatccatcatgtaccaggct
aacttcgataccaactttgaggacaggaatgcgtttgtgacggggatagctcgctacatc
gagcaggcaactgtccattctagcatgaatgagatgctggaggagggccatgagtatgct
gtcatgctctacacctggagaagctgctcaagagctataccacaggtgaagtgtaatgag
cagcccaacagggtggagatctatgagaagactgtggaggtgctggaaccagaggtcacc
aagctcatgaagttcatgtactttcagcgtaaggccatcgagcgtttctgcggggaggtg
aagcgtctctgccacgctgagcggaggaaggactttgtctctgaagcctacctcctcacc
ctgggcaagttcatcaacatgttcgctgtgctcgacgaactcaagaacatgaagtgcagc
gtcaagaacgaccactctgcctacaaaagggcagctcagttcctgaggaagatggccgac
cctcagtccatccaggagtcacagaacctctccatgtttctagccaatcacaacaggatt
actcagtgtctgcagcagcagttggaggtgattcctggctatgaagagttgttagcagac
attgtcaacatcagtgttgattactatgagaacaaaatgtacctgacacccagcgagaaa
cacatgctgctcaaggtgatgggttttggtctctatctgatggacggtaacgtcagtaac
atctacaaactagacgccaagaagaggatcaacctgggaaagatcgacaagttcttcaag
ctgcaggtggtgcctctgtttggagatatgcagatagaactatcacgttacatagagacc
agcgcccactacgaggagaacaagtccaagtggacgtgtacccagagctccatctctccc
cagtacaacctgtgtgagcagatggttcagattcgtgatgaccacatccggttcatctcg
gagctggctcgctacagtaacagtgaggtagtgaccgggtcaggcctggacagtcacaag
tcagacgaggagtacagggaactgtttgacctggcactcagagggttacagctgctgtcc
aagtggagcacacacgtcatggaagtgtactcgtggaagctggtccacccaacagataag
ttctgtaacaaggactgtcctggcacagcggaggagtatgagagagctacacgttacaac
tacacctcagaggagaagtttgccctggtcgaggtcatcgccatgatcaagggactgcag
gtgttgatgggtcgtatggagagcgtattcaaccaggccataaggaacaccatctatgca
gccctgcaggactttgcccagatgaccctcagggagcctctacgtcaggccgtacgcaag
aagaagaacgttctcatcagtgtcctgcaggcgatccgtaagaccatatgtgactgggag
ggggctcgggagcctcccaatgacccttgtctcaggggggagaaggaccccaagggaggg
ttcgacatcaaggtgccccgcagagctgtgggaccctcgagcacacagctgtacatggtt
cgtaccatgctggagtcgttgatagctgataagagtggttctaagaagactctacgcagc
agtctggatggacccatagtactggctatagaagacttccacaaacactccttcttcttc
acacacctgctcaacttcagcgaggcgctgcagcactgctgtgacctgtctcagctgtgg
ttcagagagttcttcctggagctgaccatgggtcgcaggatccagttccccatcgagatg
tccatgccctggatcctcacagaccacatactggagaccaaggagccatccatgatggag
tatgtgttgtaccctctggacctctacaatgacagtggctactacgctctgaccaagttc
aagaaacagttcctctacgatgagatagaggctgaggtgaacctgtgcttcgatcagttt
gtctacaagctggctgatcagatatttgcctactacaaagccatgtctggaagtgtcctc
ctggacaagcgtttcagggcagagtgtaaaaactatggtgtgatcatcccctaccccccc
tccaaccgttatgagaccctgctcaaacagagacacgtacagctcctaggtcgctccatc
gatctgaaccgtctggtcacccagaggatctcagcagccatgtacaagtctctggaccag
gccatcagtcgctttgagagtgaagacctcacctccattgtggagttggagtggttgatg
gacatcaacagactgactcatcgtctgctctcgaagcacatgaccctggacagcttcgac
gccatgttccgtgaggccaaccacaatgtgtctgccccctacggacgcatcacgctccat
gtcttctgggaactcaactttgacttcctccccaactactgctacaacggctccaccaac
cgcttcgttcggactgccatcccctttacccaggagcctcagcgagacaagcctgccaac
gtgcagccatactacctgtatgggtctaagcctctgaacattgcctactcacacatctat
agctcctacaggaacttcgtaggcccgccccacttcaagaccatctgtcgtctccttggt
taccagggcatcgccgtggtgatggaggaattgctcaagatagtcaagagcctgttgcag
ggcactatcctgcagtatgtgaagactctgatcgaggtgatgcctaagatctgtcgcctg
ccgcgccacgagtacggatccccaggtatcctggagttcttccaccaccagctgaaggac
attatagagtacgcagagctgaagacggacgtcttccagagtctcagagaggtggggaac
gccatcctcttctgtctgctcatcgaacaagctctgtcccaggaggaggtgtgtgacttg
cttcatgcagctcccttccagaacatcctccccagggtctacatcaaagagggggagcgt
ctggaagtcaggatgaagaggctggaggctaagtatgctccactccatctggtgcccctc
atcgagaggctggggacccctcagcaaatagctatagcccgtgagggggatctgttgacc
aaggagcgtctttgctgtggcctgtccatgttcgaggtgatccttacaaggatccgtagt
ttcctgcaggacgccgtgtggcgaggcccgcctcccaccaatggcgtgatgcatgtggac
gagtgtatggagttccaccgcctctggagcgccatgcagtttgtttactgcatacccgtc
ggcactcacgagttcaccgcagagcagtgttttggtgatgggctgaactgggcaggctgt
tccatcatcgtgctgttgggtcagcagcgccgcttcgacctgtttgacttctgctaccac
ctgctcaaggtgcagaggcaggacagcaaggatgagatcatcaagaacgtgccactgaag
aagatggctgaccgcatcaggaagtaccagatcctgaacaatgagatctttgccatcctc
aacaagtacatgaaggctgtggagaccgatagttccaccgtggagcatgtccgctgcttc
cagccacctatacaccagtccctggccacaacatgctga
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