KEGG   Oncorhynchus mykiss (rainbow trout): 110504454
Entry
110504454         CDS       T07259                                 
Symbol
si:ch211-274f20.2
Name
(RefSeq) calnexin
  KO
K08054  calnexin
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04141  Protein processing in endoplasmic reticulum
omy04145  Phagosome
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110504454 (si:ch211-274f20.2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    110504454 (si:ch211-274f20.2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:omy03110]
    110504454 (si:ch211-274f20.2)
   04131 Membrane trafficking [BR:omy04131]
    110504454 (si:ch211-274f20.2)
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:omy04091]
    110504454 (si:ch211-274f20.2)
Chaperones and folding catalysts [BR:omy03110]
 Other chaperones and cochaperones
  Calnexin / calreticulin
   110504454 (si:ch211-274f20.2)
Membrane trafficking [BR:omy04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Others
    110504454 (si:ch211-274f20.2)
 Autophagy
  ER-phagy
   Other ER-phagy associated proteins
    110504454 (si:ch211-274f20.2)
Lectins [BR:omy04091]
 L-type lectins
  110504454 (si:ch211-274f20.2)
SSDB
Motif
Pfam: Calreticulin
Other DBs
NCBI-GeneID: 110504454
NCBI-ProteinID: XP_036825535
LinkDB
Position
31:complement(2576893..2585197)
AA seq 399 aa
LHEHFEEVCFPPSNQSLRTSSDQATYRLVQVPEEAHFAETFDSDPLDRRWVQSKAVKETD
AEALKYDGQWVVEEPAAAMYPGNRALVMKSSGRHHAIAAYLHTPFNFMHTPLCLQYEVRF
GRDVECSGAYIKLLTQTHLLRLSQFSESTPYSVMFGPDKCGTSHRLHLIVRVTDSSNGRN
QEIHAPQPVDDLTVYFTDRQPHLYTLQLYQDSRYEIFIDQSLISQGRLLTDEVQYTESPD
SQPESPVSGLGVGSVAALGLELWSLSGEVMFDNFLLTDDLKLAERWTQDTWGRKQPGLLE
RLLIATNSRPWLWGVYIFTVGLPIILFISYMWPDKRFGPPDQDYYYKKFDEPQPDRQPER
DQPDRPTSLSDYGAVSREGARRRETQKVQRKSDLEVENE
NT seq 1200 nt   +upstreamnt  +downstreamnt
ttacacgaacactttgaggaagtctgtttcccaccgagcaaccagtctctgagaacctcg
tctgaccaggctacctacagacttgttcaggttccagaagaagcacattttgcagagacg
tttgactcagatcctctagataggagatgggtccaatccaaggctgtgaaagagacagat
gctgaggctctcaaatacgatggccaatgggtggtggaagagccagcggctgcaatgtat
cctgggaatagagcactggtgatgaagtcatcaggacgacaccatgccatcgctgcctac
ctacacacacccttcaacttcatgcacacacctctctgcctgcagtatgaggtgaggttc
gggagagatgtagagtgcagtggagcctacatcaaactgctgactcagacccatctgcta
cgactgagccagttcagtgagtccactccgtactctgtgatgtttggtcctgataagtgc
ggcaccagccaccgcctccatctcatcgtcagggtaacggactctagcaacggccgtaac
caagagatacacgccccccaacccgtcgatgacctgacggtgtacttcaccgaccgacaa
ccacacctctatacactacaattgtatcaagacagcaggtatgagattttcattgaccaa
tcgctgatcagtcaaggccgcctgctgacagacgaagtccagtacacagaatcccctgac
agccaaccagagtccccggtgtctggattaggggtggggtcagtcgcggcgctgggtctg
gaactgtggtcattgtcgggggaagttatgtttgacaatttcctgttgactgatgacctg
aagctggctgagagatggacacaggatacctggggacggaaacaacccggcctgttggag
agactactgatagcaactaactctcgtccctggctctggggtgtctacatcttcacggtg
ggattacccatcatcctcttcatcagctacatgtggccggacaagagattcgggccccct
gaccaggactactactataagaagtttgatgaacctcagccagacagacaaccagagaga
gaccagccagacagaccaaccagcctctcagactatggtgcggtgagcagagagggggcc
aggaggagagaaactcagaaggttcagaggaagtcagacctggaggttgagaatgagtga

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