Oncorhynchus mykiss (rainbow trout): 110504456
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Entry
110504456 CDS
T07259
Symbol
hdx
Name
(RefSeq) highly divergent homeobox isoform X1
KO
K24884
highly divergent homeobox
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110504456 (hdx)
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
110504456 (hdx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Motif
Other DBs
NCBI-GeneID:
110504456
NCBI-ProteinID:
XP_036825800
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All DBs
Position
31:1994286..2021325
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AA seq
788 aa
AA seq
DB search
MADLPPCSSSSMEEWHEKRGLQTMNLRSVFTLEQQRVLESYYDNGMTNQSKSCFQLILQC
AQETKLDFSVVRTWVGNKRRKLASRNDQNAGVSHSMVGGALSNHSVAGVALSNHTLAGGA
LVAGAMQTAEMAAARYIQRGSSHLLPSSSSSSSSSPLSSVNNNNDVILTGIYSLGSASSS
RPTVKPLPSDSELPAHVHQTLLNQSQHRSNSSVSSPLQLHSRLGTLSLPHYKTPSLSSSP
SFSSPPSSSPPGPPINSMSKRVGFPTSGAMAGGAAGVAGVGGGVPRSWARQYGSLQSGPW
PSPSQPQTRPQSNHQTLPPHPPRPRPSPSPHPIPPPSDHSPRIHQVFSLSERGEGEGLGQ
GQPSDRSRLEKHRPTPHPSDTIGCLSIAMETGDEEDEWRREEELSNMAATAHGDLQRGQG
VRDSPSRGEGSGERVLTSPSLVLSSSRPGPYPRDSYPVTTTLQTSPIIQVPVSPSAPWLI
SNSRKRTLQDRTQFSDVDLGQLKRYWDRGMTSLGSVCREKINAAANQLNVDTEIVKTWIG
NRRRKYRLMGIEIPFPKCGPAVFLTSQEGEESPSALSSDGEGLGTPELGDNLNDGASFCL
SEDGTSDSYQREEENGVEDSSSAPMVHDVKIEVIDDDDDDDDGVEMVGSDMENMQNLLEF
KLEEVQYLESQLENQNQRYYELETFTKSLLTAVRTNNLDRQQELLASLPQPADQDWDMSP
EGGANPISITTNSASNHESPLAGSNDETPLVNPNKDLPLVTVNEDGSLIAELNESSVSEE
LETETGPE
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggctgatctgcccccctgcagtagcagcagtatggaggaatggcatgagaaacgaggc
ctgcagacgatgaacctgcggtctgtgttcacattggagcagcagcgagtcctggagagc
tactatgacaacgggatgaccaatcagagcaagagctgctttcagctgatccttcagtgt
gctcaggagaccaagctggacttcagtgtggtgcggacctgggtggggaacaagagacgg
aagctggcctcgaggaatgaccagaatgcgggcgtatcccacagcatggttgggggagct
ctgtccaatcacagcgtggctggggtagctctgtccaatcacacactagcaggcggggct
ttagtcgcgggcgccatgcagacagcagagatggcggcggctcggtacatccagagaggc
tcctcccatctcctcccttcctcctcctcctcttcttcttcctctccgcttagctctgtc
aacaacaacaatgatgtcatcctgactgggatttactctctaggctccgcctctagttcc
cggcccactgttaagcccctcccttctgactctgagctgcctgcacatgtccatcaaact
ctgcttaaccaatcacagcacaggagtaacagttctgtctcctcccctctccagctccac
tccagattgggtaccttgtcacttcctcactataaaaccccctccctctcctcttccccc
tccttctcctcacccccctcctcctcaccccccggccccccaatcaacagcatgtccaag
agggtgggtttccccacaagtggggccatggccgggggggcagcaggagtggccggggta
ggagggggggtacctcggagctgggctagacagtatggttctctccagtctggcccctgg
ccctctccctcccagccccagaccaggcctcaatccaaccaccagactctcccacctcat
ccccccaggccccgtccctccccctctcctcaccccatccctcccccttcagaccactcc
ccccgcattcatcaggtcttcagcctatcagagaggggggaaggggagggattaggacaa
ggacagccttctgataggagcaggctggagaaacacagaccgactccccacccctcggac
actattggttgcctctctatcgccatggagacgggtgatgaagaggatgagtggcggagg
gaggaagagttatccaacatggctgccacggcccatggggacctccagagaggccagggg
gtgagggacagccccagcaggggagagggatctggggagagagtcctcacatccccctca
ctggtcctcagcagctccaggcctggtccatatcctcgggacagctacccagttactaca
acactacagacctcccctattatacaggttccagtcagtccctctgctccgtggctcatc
agtaactccaggaagagaactctacaggacaggacccagttcagtgatgtggacctgggc
cagttgaagcggtactgggatcgagggatgaccagtctgggttctgtctgcagagagaag
atcaacgcagcagccaatcagctcaacgtagacactgagatagtcaagacgtggatcggg
aaccggaggaggaagtaccgtctgatgggcatcgagatcccgttccctaaatgtgggccg
gccgtgttcctgacatcacaggaaggggaggagtctccctctgcgctgagttccgatggg
gaggggcttggaacaccagagttgggagacaacctaaacgatggagcatccttctgtctg
tccgaggatgggaccagtgattcgtaccagagagaagaagagaatggagtagaggacagc
agcagcgctcccatggttcacgacgtgaagatagaggtgattgatgatgatgatgatgat
gatgatggtgttgagatggtcggatctgatatggaaaacatgcagaacctcctggagttt
aagcttgaggaggtgcagtatctggagagccaactagagaatcagaatcagagatattat
gagttggagaccttcaccaagagtcttctgactgctgtaaggaccaacaacctggacaga
caacaggaacttctagccagtctacctcagcctgcagatcaggactgggacatgagtcca
gagggaggagccaaccccatctccataacaacaaactctgcatccaatcacgagtccccg
ttggccgggagcaatgacgagacaccattggtcaaccccaacaaggacctcccattggtc
actgtaaacgaagacggttcattgattgctgagctcaacgagtcgtctgtatcagaggag
ctagagactgagaccggaccagagtga
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