Oncorhynchus mykiss (rainbow trout): 110504466
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Entry
110504466 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110504466
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110504466
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110504466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
Gp5_trimer_C
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
110504466
NCBI-ProteinID:
XP_021438896
Ensembl:
ENSOMYG00000033519
UniProt:
A0A8C7SY31
LinkDB
All DBs
Position
31:1532002..1539675
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AA seq
806 aa
AA seq
DB search
MEGSDSSEPGASDQPEAQRRRQRDRLDREEAFYQFVNNLSEADYRLMRDNNLLGTPGEIT
AEELLSRLQQIKDGPEQQQPIINTSETGEATGELAEGPEDPSNGDTLLDWLNTVRRTGNT
TRSGHRGNQSWRAVSRTNPNSGDFRFSLEINVNRNLAEQQARAEGEAEAQEEAPTRAPGN
GVEVQPEAEAGTEVPMETGEVLEEPVVEEMAVIVEPEAEMEPEAEVEAEPEAEVEAEPEA
EVEAEPEAEVEAEPEAEVEAEPEAEVEAEPEAEVEAEPEAEVEAEPEAEVEAEPEAEVEA
EPEAEVEAEPEAEVEAEPEAEVEAEPEAEVEAEPEAEVEAEMVPELVVEVVPQLPSPVTT
TPPVSRPASPLVQAPPATPAPPSPPPEEPPRRGQRRARSRSPEQRRTRARTTRSRSPLTL
DRLPRHVPTSATSHTPATQAPAEGSSRTRQHVLSRQSTAEYETQSAGTGFDTGSGNAPEP
GTTPPQEGEATGGEGAAGRRPPTIMLDLQVRRVRPGEYRQRDSIANRTRSRSQNSNNTFL
YESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMALQTMIRQIMTGFGE
LSYFMDSDSDSSDSNRGGGNPTGAADLAEALNTPDGGVAGMAEGAEPPVSVSGHSIGGAG
EARTEEREGEDGMGLGLSPGIGLGVGGTPREGRARPRAPISLEEPGSLPFLRLAHFFLLN
DEDEEQPRGLTKEQIDNLSTRNFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCID
RWLSENSTCPICRRAVLVSANRESVV
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggagggctccgacagttccgagccgggcgccagtgaccaaccagaggcccagcgcagg
cggcaacgggaccggctagaccgggaggaggccttctaccagtttgtcaacaacctgagt
gaggcagactaccggctgatgagagacaacaacctgctgggtaccccaggtgagatcaca
gcagaggagttgttgagtcggctgcagcagattaaggatggaccagagcagcagcagcct
atcatcaacaccagtgagactggagaagctacaggagaactggcagaaggtccagaggac
ccgtctaatggcgacaccctcttggattggctgaacaccgtcaggcggacaggcaacacc
acccgcagtggtcaccgaggcaaccagtcatggcgggcggtgagccggaccaacccaaac
agcggagacttccggttcagtctggagatcaacgttaaccgtaacctggctgagcagcag
gcccgcgcggagggggaggctgaggcgcaggaggaggccccaactagagcacctggcaat
ggggtggaggtccagcctgaggcggaggcggggacggaggtgcccatggagacaggagag
gtgctggaggaaccagttgtggaggagatggctgtcatagtggaaccagaagcggagatg
gagccagaggctgaagtagaagctgagccagaggctgaagtagaagctgagccagaggct
gaagtagaagctgagccagaggctgaagtagaagctgagccagaggctgaagtagaagct
gagccagaggctgaagtagaagctgagccagaggctgaagtagaagctgagccagaggct
gaagtagaagctgagccagaggctgaagtagaagctgagccagaggctgaagtagaagct
gagccagaggctgaagtagaagctgagccagaggctgaagtagaagctgagccagaggct
gaagtagaagctgagccagaggctgaagtagaagctgagccagaggctgaagtagaagca
gagatggtcccagagttagtagtagaggtagtcccacagctgcccagccctgtcaccacc
acccctcctgtctccagaccagccagtcccctggtgcaggcccctccagcaacccctgcc
cctcctagcccgccccctgaggagcctccgcgacggggccagagacgagcccgcagccgt
agccctgagcagcgccggaccagggctcgcaccacacgaagtcgttcccccctcaccctg
gaccgactcccccgccacgtccccacctcagccacctcacacacccccgccacccaggca
cccgcagagggaagctcacggactcgacagcatgttctgtcccggcagagcaccgcagag
tacgagacccagtcagccggaacagggtttgacacaggttctgggaacgccccagagccc
ggtaccaccccaccccaggagggagaggccacgggcggggagggagcagcaggacgacgt
ccccccaccatcatgctggacctgcaggtgcgtcgtgttcgtccaggtgagtaccgccag
agggacagcattgctaacagaacccgctcacgctcccagaactccaacaacaccttcctg
tacgagagtgagaggggggggttccgcaggaccttctcccggtccgagcgtgcgggtgtg
aggacgtacgtcagcaccatcaggatccccatcaggaggatcagtgatgcagggttggga
gaggccacctccatggctctgcagaccatgatacgacagatcatgaccggcttcggagag
ctcagctacttcatggactcagactctgactcctcggactcaaaccgtggaggtggtaac
cccactggcgctgccgacctggccgaggcgctcaatactcctgacgggggcgtagccggc
atggcggagggggcggagcctcctgtctcagtgagcgggcatagtattggaggagccggg
gaggcaaggacagaggagagggagggggaggacgggatgggtctaggtctgtccccaggg
ataggtttaggggtggggggcacccccagggaggggcgagctcggccccgtgcccccatc
agtctggaggaaccagggtcactacccttcctccgccttgctcacttcttcctcctgaat
gatgaggatgaggaacagcccagaggactcaccaaggagcagatcgacaacctctccacc
aggaactttggggagagtgatgctctgaagacctgcagtgtgtgtatcacagagtatgct
gaggggaacaagttgaggaagttgccctgttctcatgagtaccatgttcactgtatcgac
cgctggctgtctgagaactccacctgtcctatctgccgcagggccgtgttggtgtctgct
aaccgggagagtgtggtctaa
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