Oncorhynchus mykiss (rainbow trout): 110504541
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Entry
110504541 CDS
T07259
Symbol
gabra6a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6a
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04080
Neuroactive ligand-receptor interaction
omy04082
Neuroactive ligand signaling
omy04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110504541 (gabra6a)
04082 Neuroactive ligand signaling
110504541 (gabra6a)
04519 Cadherin signaling
110504541 (gabra6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110504541 (gabra6a)
Ion channels [BR:
omy04040
]
Ligand-gated channels
GABA-A
110504541 (gabra6a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
110504541
NCBI-ProteinID:
XP_036825559
LinkDB
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Position
31:complement(9521886..9547984)
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AA seq
419 aa
AA seq
DB search
MGIMILIFFTLTCVGRVYGQESYAGENITRILDRLLDGYDNRLRPGSGGMITEVKTDIFV
TSFGPVSDVEMEYTIDMFFRQTWVDERLKYDGAVEILRLNNKMVDKIWTPDTFFRNSRKS
IAHNMTTPNKLFRIMQNGTVLYTMRLTISAECPMSLMDFPMDGHACPLKFGSYAYTSSEI
TFTWRKGLEASVDCPQESISLLQYDLVGQRLSMETFKSNTGFYSVMVVHFLLQRKLGYYL
IQTYIPLIMVVVLSQVAFWINKESVPARTVAGITTVLTMTTLSISARQSLPKVSYATAMD
WFIAVCFAFVASALIETDGSAHLRGGLKKRYNSISQSEMDTGPSVPIFLQQGSAVPPIPA
LAGTSPIDQYSRIMFPLAFALFNLFYWIIYLGKDTMEQARYVFIKSLFCSVMTSWNMPD
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcatgattctgatttttttcactttgacttgtgttggccgtgtctatggacaa
gaaagctacgcaggtgaaaacatcacccgtattctggaccgactactagatggatatgac
aacaggttgcggccaggatccggaggtatgattacagaggtgaaaacagatatctttgtc
accagctttggaccagtatcagatgtggaaatggagtacaccatcgacatgttcttccga
cagacctgggtggacgagaggctgaagtacgacggcgccgtggagatcctgcgtctcaat
aacaagatggtggataagatctggacacccgacacgttcttcaggaactccaggaagtcc
atcgcacacaatatgaccactcccaacaagctgttccgcatcatgcagaacgggaccgtc
ctctataccatgagactaaccatcagtgcagagtgtcccatgagtctcatggacttccct
atggacggacatgcctgtcctctcaagttcggcagctatgcgtacacgagcagtgagatc
acctttacctggaggaagggtctggaagcttctgtagactgtcctcaggagtctatcagt
ctgctccagtatgacctggtgggacagaggttatccatggagacgttcaagtccaacaca
ggtttctactctgtcatggtggttcattttctactacagaggaagctaggctactacctg
attcagacgtacatccctctgattatggtggtggtgctgtcgcaagtagccttctggatc
aacaaagagtctgtccctgcacgcactgtggctggcatcaccacggtcctcaccatgaca
accctcagcatcagtgcccgccagtctctgcccaaggtgtcctacgctacagccatggac
tggttcatcgccgtgtgttttgcgtttgtggcgtccgcgctcatcgagactgatggtagc
gctcaccttagagggggcctgaagaagaggtataactccatatcccagagtgagatggat
actggcccctcggtgcccatcttcctgcaacagggttcagctgtgccccccatcccagcg
ctggctggcaccagcccaatagaccagtactcccgcatcatgttccccctggccttcgca
ctcttcaacctcttctactggatcatatacctgggcaaggacaccatggaacaggccagg
tatgtgttcataaagtctctattctgttctgttatgacatcatggaacatgccagattga
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