KEGG   Oncorhynchus mykiss (rainbow trout): 110504570
Entry
110504570         CDS       T07259                                 
Symbol
cetn2
Name
(RefSeq) caltractin isoform X1
  KO
K10840  centrin-2
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    110504570 (cetn2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    110504570 (cetn2)
   03036 Chromosome and associated proteins [BR:omy03036]
    110504570 (cetn2)
   03400 DNA repair and recombination proteins [BR:omy03400]
    110504570 (cetn2)
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     110504570 (cetn2)
Chromosome and associated proteins [BR:omy03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    110504570 (cetn2)
   Centrosome duplication proteins
    Centriole replication proteins
     110504570 (cetn2)
DNA repair and recombination proteins [BR:omy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      110504570 (cetn2)
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_9 AIF-1 EF-hand_5 EF_EFCAB10_C EH Dockerin_1 SUB1_ProdP9 EF-hand_14 DUF7645 SurA_N_3 RTP SRI DUF7390 LETM1_RBD MJ1010-like_2nd MgtE_N
Other DBs
NCBI-GeneID: 110504570
NCBI-ProteinID: XP_036825795
Ensembl: ENSOMYG00000043333
LinkDB
Position
31:11175508..11181715
AA seq 173 aa
MATSVKRPSLGPVPPPRKKSSPKSELTEELKQEIREAFELFDTDASGHIEVKELKVAMRA
LGFEPKKEEIKRMITEVDKDGTGKISFSDFLTVMTQKMAEKDSKEEILKAFRLFDDDETG
KISFRNLKRVAKELGENLTDEELQEMIEEADRDGDGEVNQGEFLRIMKKTSLY
NT seq 522 nt   +upstreamnt  +downstreamnt
atggcaaccagcgtaaagaggccgtccctaggtccggtccctccccccaggaagaagtcc
agccccaagtcagagctcactgaggagctgaaacaggagatcagagaggcctttgaactt
ttcgacaccgacgcctccggacacattgaagtcaaggagctaaaggttgctatgagggcg
ctggggtttgagccgaagaaagaggagattaagaggatgataacggaggtggataaggac
ggaacaggaaagatctccttctctgattttctcactgtcatgactcagaagatggctgag
aaggattctaaggaggagatcctgaaagcattccgtctgtttgatgatgatgagacgggg
aagatctccttcaggaacctgaagagggttgccaaggaactaggagagaacctgactgac
gaggaactgcaggagatgatcgaggaggcagacagggatggagacggcgaggtgaaccag
ggagagttcctccgcatcatgaagaagaccagcctgtactga

DBGET integrated database retrieval system