Oncorhynchus mykiss (rainbow trout): 110504646
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Entry
110504646 CDS
T07259
Name
(RefSeq) zinc finger protein ubi-d4 isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110504646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110504646
03036 Chromosome and associated proteins [BR:
omy03036
]
110504646
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110504646
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110504646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHD_4
PHDvar_NSD
zf_RING_Vps8
zf-C2H2
zf-C2H2_4
PHD_2
zf-H2C2_2
zf-PHD-like
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
110504646
NCBI-ProteinID:
XP_021439085
Ensembl:
ENSOMYG00000019973
LinkDB
All DBs
Position
31:16168203..16172695
Genome browser
AA seq
406 aa
AA seq
DB search
MSVIVLSCFRLGEQYYKDAMEQCHSYNARLCAERSILMPFIDSQTGVAQSNCYIWMEKRH
RSAGMAPGQLYSYPSRRWRKKRRSHPPEDPRLAFPPVKSAELELGLKRDAVGAVDGSSLE
ALLKGEPLERRGPPDPRAPEDNPATPEPVAAMVSSHTSSGRIRKRVLDHDDYLDDLDDED
FEDETPKRRGKGKSKGRGVGNGKKKLEAAAAALEEQDKPYACDICGKRYKNRPGLSYHYT
HSHLAEEEGEDREEIESPPPRRQPEAHKTPKKGPNGLALPNDYCDFCLGDSAHNQKTGQS
EELVSCSDCGRSGHPSCLQFTDVMMAAVKTYRWQCIECKCCNVCGTSENDDQLLFCDDCD
RGYHMYCLNPPMTEPPEGSWSCHLCLALLKDKASIYKQQSPTTEDE
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgattgtgctttcttgtttcaggctcggtgagcagtactataaggatgctatg
gaacagtgccacagctataatgctcgtctgtgtgctgagaggagcatccttatgcctttc
attgactctcagacaggtgttgctcaaagcaactgttacatctggatggagaagagacac
aggagtgcaggcatggctcctgggcagctgtatagctatccgtctcgacgctggaggaag
aaacgacggtcccaccctcctgaggacccccgtttggccttcccccctgtcaaatcagcg
gagctggagctgggtctgaaacgggatgccgtgggagcggtggacggcagcagcctggag
gccttgctgaagggggagcccctggagaggaggggcccaccggacccccgggccccggaa
gacaacccagccacacctgaacctgtggctgccatggtctccagccacacctcctctgga
cgcatccgcaagagggttctggaccacgatgactacctggatgatctggatgatgaggac
tttgaggatgagacccccaagagacgagggaagggcaagtccaagggtcgtggagtggga
aatggaaagaagaaactggaggcagctgctgcagccttggaggagcaggacaaaccatac
gcctgtgacatctgtgggaagcgctacaagaaccgtccgggcctgagctaccactacaca
cactcccatctggcggaggaagagggggaggacagagaggagatcgagtcccctcccccc
cggcgccagcctgaggcgcacaagacccctaagaaaggccctaacggtctggccctgccc
aacgactactgcgacttctgtctgggagactccgcccacaaccagaagaccggccagtca
gaagagctagtgtcctgctcagactgcggacgctctggtcacccgtcctgcctgcagttc
acagatgtgatgatggcagctgtgaagacgtaccgctggcagtgtattgagtgcaagtgc
tgcaacgtctgtggtacctcagagaacgacgaccagctgctgttctgtgatgactgtgat
cgaggataccacatgtactgcctcaaccctcctatgactgagcccccagaaggtagttgg
agttgtcacctttgcctggcgctgctgaaggacaaggcatccatatacaaacagcagagc
cccaccacagaggatgaatag
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