KEGG   Oncorhynchus mykiss (rainbow trout): 110504752
Entry
110504752         CDS       T07259                                 
Symbol
rnf4
Name
(RefSeq) RING finger protein 4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omy04121]
    110504752 (rnf4)
Enzymes [BR:omy01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110504752 (rnf4)
Ubiquitin system [BR:omy04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110504752 (rnf4)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_5 zf-RING_UBOX zf-C3HC4_3 zf_RING_Vps8 Prok-RING_4 zf-RING_4 RING_XB3-XBAT31 zf-rbx1 zf-C3HC4_4 TerY_C zf-UDP IBR_1 zf-RING_11 zf-Nse zf-RING_10 Zn_ribbon_6 zf-RING_16 DZR C5HCH Rtf2
Other DBs
NCBI-GeneID: 110504752
NCBI-ProteinID: XP_021439234
Ensembl: ENSOMYG00000044994
UniProt: A0A8C7WGL5
LinkDB
Position
31:complement(19374557..19378037)
AA seq 189 aa
MSSTTQRKRRTGAPSSSRRTAKSSRVTTTMPLRAAAATAETIAVLESSRTSSEEVVDLTC
EGSESTVVDLTNTDSVVVVDEGLQGRRGLGGESYVLSSDEEGDANGSLSADLLSSLQASS
RARSTPGTVSCPVCMDSYAEIIESGRLVVSTKCGHLFCSQCLRDSLSRSHTCPTCRKKLT
HRQYHPIYI
NT seq 570 nt   +upstreamnt  +downstreamnt
atgagcagtacaacacagaggaagagaaggactggagccccctcaagttccagacgcaca
gccaagagtagcagagtcaccaccactatgccacttcgtgcagcagcagccactgctgag
accattgctgtgctggagagcagtaggactagcagtgaggaggtggtggacttgacatgt
gaaggttctgagtcaactgtggttgacttgaccaacactgattctgtggtggttgtcgat
gaagggcttcagggcagacgtggacttggcggtgagagttacgtgctgagcagtgatgag
gagggggatgccaatgggagcctcagtgctgaccttctatcttctctacaggccagcagt
agagccaggtctacgccaggtacagtcagctgcccagtgtgtatggactcctatgctgag
atcattgaaagtggcagactagtggtctccacaaaatgtggtcaccttttctgcagtcag
tgcctccgcgactcactgtcgagatcccacacttgcccaacctgcagaaagaaactgacc
cacaggcaataccaccccatatacatctga

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