Oncorhynchus mykiss (rainbow trout): 110504900
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Entry
110504900 CDS
T07259
Name
(RefSeq) testican-1 isoform X1
KO
K08136
testican
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
omy00535
]
110504900
Proteoglycans [BR:
omy00535
]
Extracellular matrix (ECM) proteoglycans
Others
110504900
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GFIT
Motif
Pfam:
SPARC_Ca_bdg
Thyroglobulin_1
Kazal_2
Kazal_1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
110504900
NCBI-ProteinID:
XP_036826230
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Position
31:complement(27208454..27655647)
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AA seq
473 aa
AA seq
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MLFCLLPLAALLLRAEGRRGETEVRNNNNGHALDNDKWLSTVSQYDKDRYWNKFRDEVED
DYFKSWGPAKPIDQETEARPGRHEEPGTKVHSNPGKRRTEEALDATKHPCVKVRCPPHRV
CVSHDYQTAICTNTNHKQPTHSVKPRKGSLAYKHWAGAGAHGKCRPCPVIHPSPVCGSDG
HTYSSKCTLEFQECKSGKNIALKCGGPCPCLPDLELVKPHSHKTEKSVCSDGDLHSLASR
LKDWFGVLHLDANRDLKSSANSDSAAGRFDTSILPICKDSLGWMFNKLDMNYDLLLDQSE
LSAIYLDKYELCMKPLFNSCDSFKDGKLSNNEWCYCFQKPDGLPCQNEMNRSQIQGRRNT
VIGAYIPRCSEEGYFKPTQCHGSTGQCWCVDKYGNEIAGSRKQGNPTCEEDQETSGDFGS
GGAVILLDDQEEEPAQSGRSRQKQRRGRIHPRGAIEDDEDEEDDKDDEIGYIW
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcttttctgtctgctgcctctcgcggctctcttgctgcgcgctgagggcaggcgcggg
gaaacagaggtccgtaacaacaacaatggccacgcgctggacaacgacaaatggctgagc
acggtgtctcagtacgacaaggacagatattggaacaaattcagagatgaagttgaggat
gactacttcaaaagctggggtcctgccaagccaatcgaccaggagacagaggcgaggccc
gggagacatgaggaacctggaaccaaagtccactccaacccagggaagaggagaacagag
gaggctctggacgccactaaacatccatgtgtgaaggtgcgctgccctcctcacagggtg
tgtgtcagccacgactaccagacagccatctgcaccaacaccaaccacaagcagcctaca
cacagtgtgaaaccgaggaaaggaagcttggcctacaagcactgggcaggagcaggggcc
catgggaagtgtaggccatgccctgtcatccaccccagccctgtgtgtggatctgatgga
cacacctactcctctaagtgtacgctggagttccaggagtgtaagtcagggaagaacatc
gctctgaagtgtggaggaccgtgtccgtgtctgcctgacctggaactggtcaaaccacac
agccacaaaacagagaagagcgtctgcagtgatggggacctgcatagcctagcatccaga
ctgaaggactggttcggagttctccacctcgacgccaaccgagacctcaaatcctctgcc
aactctgattcagcggcaggacgttttgacaccagtatcttgccgatctgtaaggactct
ctgggttggatgttcaacaagctggacatgaactatgacctcctgctggaccaatcagag
ctcagcgccatctacctggacaagtatgagctgtgtatgaagcccctgttcaactcctgc
gactccttcaaggatggaaaactgtccaataacgagtggtgctactgcttccagaaacct
gatggtctgccctgccagaatgagatgaaccggagtcagatccagggtcggaggaacact
gtcataggggcctatattccacgctgttctgaggagggatactttaagccaacccagtgt
catggtagtactggacagtgttggtgtgtggacaaatacggcaacgagatcgccggctcc
agaaaacagggcaaccccacctgtgaggaggaccaagagacctcaggggattttggcagt
gggggcgctgtcattctccttgatgaccaggaggaggagccagctcagagtgggaggagc
cggcagaagcagaggcggggccggatccatcccagaggggccattgaggatgacgaggac
gaggaagatgacaaagatgacgagattggctacatctggtag
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