Oncorhynchus mykiss (rainbow trout): 110504931
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Entry
110504931 CDS
T07259
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110504931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110504931
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110504931
U7-dependent histone pre-mRNA processing factors
110504931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
Motif
Other DBs
NCBI-GeneID:
110504931
NCBI-ProteinID:
XP_021439483
Ensembl:
ENSOMYG00000036480
LinkDB
All DBs
Position
31:28358692..28370507
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AA seq
596 aa
AA seq
DB search
MATLAAAAVVAAAGRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRE
TGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIE
SPYGDNIMPDEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAFAL
LQAQVVMRIVDPEIALKMLHRQTPVQPLVPNSQAGPVPVANQPIPPANAPVSQSQPMPGM
HMNGAPQMMQPPPMGGGPGPMPGQGPVGPPGNLQHSPVGSSGQAAIERPQGPGGIPPRGL
LGDGPNDPRGGTLLSVTGEVIEPSRGGGFIGAPPPHQGPPMHMNQMVGGPPLDMRPPHDM
RGPPMGEPRGMMGEPRGPPMGEPRGMMGEPRGPPMGEPRGMMGEPRGPPMGEPRGMMGEP
RGPPMGESRGMMGEPRGPPMGESRGMMGEPRGPPMGEPRGMMGEPRGPPMMEQRGPPMME
PRGPPMENRGRDPRAVDPRGPVSGQRVPTAQGMQGPSPHSMNTNAPPPARPGPGVPQSGG
SFSPGQSQVTSQDHEKAALIMQVLQLTPEQIAMLPPEQRQSILVLKEQILKTTGAP
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcgactttagcagctgctgctgttgttgctgccgctggcagagatcccgctgttgac
cgttcattgcgctctgtctttgtgggaaacattccatatgaggccacagaggagcaactg
aaagacattttttcagaagtcggtctcgttgtcagctttcggttggtgtatgatagggag
acaggcaagccgaagggatatggcttctgtgagtatcaggaccaggagacagccctcagt
gccatgcggaacctgaacggaagagagttcagcggccgggctctccgtgtcgacaatgct
gctagtgagaaaaacaaagaggagctcaagagtttggggacaggagcccccattattgag
tctccctacggggacaacatcatgccagacgaggctccagagtctattagcagagctgtg
gccagtttgcccccagagcagatgtttgagctcatgaaacagatgaagctgtgtgtgcaa
aacagtccccaggaggccaggaacatgctgttgcagaacccccagctggcctttgctttg
ctgcaggcccaggttgtcatgaggatcgtagaccctgagattgccctgaaaatgcttcac
cgtcaaaccccagtgcagccattggttcccaacagtcaagctgggccagtgccagtggcc
aaccagcctattcccccagccaatgctccagtctcccagtcacagcccatgccgggcatg
cacatgaacggagctcctcagatgatgcagccccctcctatgggtgggggacctgggccc
atgccaggacagggaccagtgggaccaccaggaaacctccagcactcacccgtaggatca
tctgggcaggctgctatcgagcgacctcaaggaccaggtggtatccctcccagaggcctg
cttggtgatggccccaatgaccccagaggaggaaccctgctctctgttacaggagaggtc
atcgaacccagtcgaggaggaggcttcatcggggcccccccaccacaccaggggcccccc
atgcacatgaaccagatggttggagggcctcctctggacatgaggccgccccatgacatg
agaggaccccccatgggtgaacccagaggcatgatgggagagccccggggaccccccatg
ggtgaacccagagggatgatgggagagccccggggaccccccatgggtgaacccagaggg
atgatgggagagccccggggaccccccatgggtgaacccaggggcatgatgggagagccc
cggggaccccccatgggtgaatccaggggcatgatgggagagccccggggaccccccatg
ggtgaatccaggggcatgatgggagagccccggggaccccccatgggtgaacccaggggc
atgatgggagagccccggggaccccccatgatggaacagcggggaccccccatgatggag
cccaggggaccccccatggagaacagaggtcgggacccccgagcggtggacccccgtgga
ccagtgtcgggccagagggttcccactgcacaaggaatgcagggcccctcccctcactcc
atgaatactaatgcccctccacctgccagaccgggtcctggtgtaccacagtccggaggt
agcttcagcccagggcaaagccaggtgacctcacaggaccatgagaaggccgccttgatc
atgcaagtgctgcagctgaccccagaacagatcgccatgctgcccccagaacagaggcag
agcattcttgtcctcaaagagcagatcctgaagaccaccggggcaccctga
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