Oncorhynchus mykiss (rainbow trout): 110504954
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Entry
110504954 CDS
T07259
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110504954
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110504954
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
110504954
NCBI-ProteinID:
XP_021439537
UniProt:
A0A8C7UJV7
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Position
31:complement(29714139..29715857)
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AA seq
297 aa
AA seq
DB search
MYNMMETEIKSPLPQSNSGSAAGNKNNSANDQDRVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LPGGLLAPGANAVNNGVSVGQRMDSYAHMNGWTNSAYSLMQDQLAYPQHHSPQIQQMHRY
EMAGLQYPMMSSAQTYMNAASTYSMSPAYTQQTSSAMGLGSMASVCKTEPSSPPPAITSH
SQRACLGDLRDMISMYLPPGGDSADHPSLQTSRLHSVHPHYQTAGTGVNGTLPLTHI
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaactgagatcaagagcccactcccgcagtccaattcgggttca
gcggcgggcaacaagaacaacagtgccaacgaccaggaccgggtgaagcggcctatgaat
gctttcatggtgtggtcccgtggacagcggcgaaagatggcacaagagaaccctaaaatg
cacaactctgagattagcaagcggctcggtgcagactggaaacttttgaccgacgcggag
aagagacccttcatcgacgaggccaagcgtctgcgcgccatgcacatgaaggagcatccg
gattacaaataccgtccccgcaggaagaccaagaccctgctcaagaaagacaagtattct
ttgcctggaggacttctggcgccaggtgccaacgctgtcaacaacggcgtctcggtggga
cagcggatggacagttatgctcacatgaatggctggaccaacagtgcgtactccctcatg
caggaccagttggcctaccctcagcatcacagcccacagattcagcagatgcaccggtat
gagatggcagggctccagtaccccatgatgtcctcggcgcaaacctacatgaacgcagca
tccacgtacagcatgtcccccgcatacacgcagcaaacctccagtgccatgggcttgggt
tccatggcctccgtgtgcaagaccgagccgagctcaccacctccggcgattacttctcat
tcccagagagcgtgtttgggggacctgagggatatgatcagcatgtacctgcctcccggt
ggcgacagcgcggatcacccgtccctgcagaccagtcggttacacagtgtacatccgcac
tatcagaccgcggggactggcgtgaacggaacgctacccctaacccacatttga
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