Oncorhynchus mykiss (rainbow trout): 110505028
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Entry
110505028 CDS
T07259
Name
(RefSeq) syntaxin-3 isoform X3
KO
K08486
syntaxin 1B/2/3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
110505028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110505028
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110505028
Membrane trafficking [BR:
omy04131
]
SNARE
Syntaxin (Qa)
Stx-PM
110505028
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
110505028
Exosomal proteins of other body fluids (saliva and urine)
110505028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
DUF3040
EspB_PE
Branch
FlaC_arch
Relaxase_C
YtxH
DUF6827
ArAE_1_C
Motif
Other DBs
NCBI-GeneID:
110505028
NCBI-ProteinID:
XP_021439641
Ensembl:
ENSOMYG00000021875
LinkDB
All DBs
Position
31:complement(32889438..32912507)
Genome browser
AA seq
290 aa
AA seq
DB search
MKDRLEQLKATCDNDDEEVEIAIDNAAFMDDFFSQIDDIRISIDKIDENVSEVKKLYSVI
LSAPTSDQKTQDDLEAVTNNIKKMANNARNKLKTIERDLASEEEERISADMRIRKSQHAV
LSRKFVEVMTKYNEAQVDFRERSKGRIRRQLEITGKATTDEELEEMLEGGNSAVFTSGIM
DSGISKQALSEIEARHKDIVRLESSIKELHDMFVDIAMLVESQGDIVNNIEVQVSKAVDH
IVVAKTETKKAIQYQSKARKKRVIILVILIIVLAIVALIIGLSVGLSKKN
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgattggaacaacttaaagcaacatgtgacaatgacgatgaggaagtggaa
attgctatcgacaatgcagcttttatggatgactttttctctcagattgacgacatcagg
atcagcattgataagattgatgagaatgtgtctgaagtcaagaagctctactcggtcatc
ctgtctgcccccacatcagaccagaaaacacaggatgacttggaggctgtcaccaacaac
atcaagaagatggctaacaacgcccggaacaaactcaaaaccatcgagagggatctggcg
tctgaggaagaggagaggatttcagccgacatgcggatacgcaaatcacagcatgcagtg
ctgtccaggaagtttgtggaagtgatgaccaagtacaatgaggcccaggtggacttcagg
gagaggagtaaaggacgcatccggagacagctagagatcactggaaaagccacgacagat
gaggagctggaagagatgttagaggggggaaactctgctgtcttcacttcagggatcatg
gactctgggatctcgaagcaagctctcagtgagatcgaggcgcgacacaaagacattgtg
cgtctggagagcagcatcaaagagctgcatgacatgttcgtagacatcgccatgctggtg
gagagccagggtgacatagtgaacaacatagaggtgcaagtgtctaaagctgtggaccac
atagtggtggccaagactgagaccaagaaagccatccagtaccagagcaaagcacgcaag
aaaagggtgatcatattggtgattctgattatcgtgctcgccatagtggctctgattatt
gggttgtcggtgggattgagtaagaagaattga
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