Oncorhynchus mykiss (rainbow trout): 110505035
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Entry
110505035 CDS
T07259
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110505035
03036 Chromosome and associated proteins [BR:
omy03036
]
110505035
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
110505035
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
110505035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
110505035
NCBI-ProteinID:
XP_036825514
Ensembl:
ENSOMYG00000022048
LinkDB
All DBs
Position
31:complement(32971709..32983276)
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AA seq
709 aa
AA seq
DB search
MGDTLEFNEIYQESKGSWNDGRLRFSKQNVVYKSSKTGKVDNIPAAELSQATWRRVCLGH
GIKLATSTGHVYKYDGFRDTDYERISEFFKANYKVELTEKDMCVKGWNWGTAKFSGPLLS
FDVNDSSVFEIPLASVSQCATGKNEVTLEFHQNDDAEVSLMEVRFYVPPGPADEGADPVE
AFAANVLSKADVIQATGDAVCVFKELQCLTPRGRYDILIYPAFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEELRLTLNMSEEEVEKRYE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGNTPGAQCITCSYKAQSGLLYPLERG
FIYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEVETKQGNQFTFSSIEREEYGKLFDFV
NAKKLNIKNRGFKEKKGMKSKNNEYSDSDEDQHDAYLERMKAEGKIREEGDGSNDSDEDT
DESFNPGEESDVAEEYDSNASESESGSGGDGSDDEGKKKTAKKAKVVKERKPRKEKKQKD
TNAPKRPMSSYMLWLNSSREHIKSENPGISITEISKKAGEMWKQIGKDDKEGWDRKAEEA
KKNYEKAMKEYRENGGGSSTPSKKESKKAGGKKEDKAGGKKRKSDRGEEEKEQGGNDSFK
SREFISSEESSSEGERKKAKKAKGKPKGKESEEEEEVVTTPPSSEEDSD
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacgcttgagttcaacgagatctaccaggaatccaaggggtcctggaacgac
ggtcgtctgaggttcagtaagcagaatgtggtgtataagagcagtaagacggggaaggtg
gacaacatcccggcagcagagctgtcccaggccacgtggaggcgtgtgtgcctgggacac
ggcatcaagctggccaccagcaccggacatgtctacaaatatgacggcttcagagacacg
gattatgagaggatctcggagttcttcaaggccaactacaaggtggagctgacagagaag
gacatgtgtgtgaagggctggaactggggcactgctaaattctctggtccattgttgtca
tttgacgtgaatgacagctccgtgtttgagatccccctggccagcgtgtcccagtgtgcc
accgggaagaacgaggtgacgctggagttccaccagaacgatgacgctgaggtctctctc
atggaggtccgtttctacgtcccccccggccccgcagacgagggggcagaccccgtggag
gcgtttgccgcgaatgtgctgtctaaggccgatgtgatccaggctacaggagatgctgtg
tgtgtcttcaaagagctgcagtgcctcacacccaggggcaggtatgatatcctcatctac
cccgccttcctccacctccatggtaagacgtttgactacaagatcccctacaccaccgtg
ctgcgtctcttcctgcttccacacaaggatcagagacagatgttctttgtgatcagtctg
gacccgcccatcaagcaggggcagacccgttaccacttcctcatcctgctcttctctaag
gaggaggagctccgcctcaccctcaacatgagcgaggaggaggtggagaagcgttatgaa
gggaagctcagtaagaacatgtcaggttctctctatgagatggtcagcagggtgatgaag
gctctggtcaacaggaagatcaccgtgcccggaaacttccaggggaacaccccaggggcc
cagtgtataacgtgttcctacaaggcacagtccggcctgctctacccactggagaggggt
ttcatctacgtgcataagccgcccgtccacctgcgcttcgaggagatctcctgtgtcaac
ttcgccagaggcaccaccaccacgcgctccttcgacttcgaggtggagaccaagcagggg
aaccagttcaccttcagcagcatcgagagggaggagtacgggaagctgtttgactttgtc
aacgccaagaaactcaacatcaagaatagaggattcaaggagaagaagggcatgaagagt
aagaacaacgagtacagtgactccgatgaagaccagcacgatgcctatctggagaggatg
aaggctgagggcaagatcagagaggagggagacggcagcaacgactccgatgaagacacc
gatgagtctttcaaccctggggaggagagtgatgttgctgaggagtatgacagtaacgcc
tcagagagtgaaagcggcagcggaggtgatggcagcgatgacgagggaaagaagaagact
gcaaagaaggccaaagtagtgaaggagaggaagccacgcaaagagaagaagcagaaggac
accaacgcccccaagaggccgatgagttcctacatgctgtggctcaactccagccgcgag
cacatcaagtcggaaaaccccggaatctcaatcacagagatctccaagaaggccggagag
atgtggaaacagatagggaaggacgacaaagaggggtgggacaggaaagcagaggaggct
aagaagaactatgagaaagccatgaaggaatacagagagaacggtggaggctcctctaca
ccctccaagaaggagagcaagaaggcaggaggcaagaaggaggacaaggcaggaggcaag
aagaggaagtccgacagaggagaggaagaaaaggagcaaggagggaacgacagttttaag
agccgagagtttatctccagcgaggagagttcgtctgagggcgaacggaagaaggccaag
aaagccaaaggcaaacccaagggcaaggaatctgaggaagaggaggaagtggtgaccacg
ccccccagctctgaggaggactctgactaa
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